EWM28695.1, cds1868 (CDS) Nannochloropsis gaditana

Overview
NameEWM28695.1
Unique Namecds1868
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:344833..345945 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28695.1
Productretinol retinaldehyde reductase
Orig transcript idgnl|cribi|Naga_100002g151.4814.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:344833..345945 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR020904Sc_DH/Rdtase_CS
IPR016040NAD(P)-bd_dom
IPR002347Glc/ribitol_DH
IPR002198DH_sc/Rdtase_SDR
Homology
BLAST of EWM28695.1 vs. NCBI_GenBank
Match: gi|585111118|gb|EWM28695.1| (retinol retinaldehyde reductase [Nannochloropsis gaditana])

HSP 1 Score: 770.77 bits (1989), Expect = 0.000e+0
Identity = 370/370 (100.00%), Postives = 370/370 (100.00%), Query Frame = 0
Query:    1 MGGCLEFWNNLCHIDLLEEWIWYSYFTGAWLLGPFMAFLIVVYDFCSGFAFPLWHVEPSRDKAIFITGCDTGFGRSLAVRLAQKGFRVYAACLTANGVEEIKAECSTVETMMLDVTDENQVQEAAARVDAENPEGLYALVNNAGVAKSGLIDWFGLSDFRFCMEVNFFGVVSVTKAFLPLIKRCKGRIVVVSSVAGVSCGYPLSAPYSASKHAVELFASSLRQELRAWGIKVSTINPGFHRTEMNKVAVKGLETCWSKVDPVIQAQYGQSYFEGCRDFVKTHTEDVVFDPINVVRAMEHAVTCTRPRIQYRVGLDAKYGLVWTQIFPLRVGEKLIYALTTNKKMRSIVGLPTAPRAEDAQADAPFGDHRG 370
            MGGCLEFWNNLCHIDLLEEWIWYSYFTGAWLLGPFMAFLIVVYDFCSGFAFPLWHVEPSRDKAIFITGCDTGFGRSLAVRLAQKGFRVYAACLTANGVEEIKAECSTVETMMLDVTDENQVQEAAARVDAENPEGLYALVNNAGVAKSGLIDWFGLSDFRFCMEVNFFGVVSVTKAFLPLIKRCKGRIVVVSSVAGVSCGYPLSAPYSASKHAVELFASSLRQELRAWGIKVSTINPGFHRTEMNKVAVKGLETCWSKVDPVIQAQYGQSYFEGCRDFVKTHTEDVVFDPINVVRAMEHAVTCTRPRIQYRVGLDAKYGLVWTQIFPLRVGEKLIYALTTNKKMRSIVGLPTAPRAEDAQADAPFGDHRG
Sbjct:    1 MGGCLEFWNNLCHIDLLEEWIWYSYFTGAWLLGPFMAFLIVVYDFCSGFAFPLWHVEPSRDKAIFITGCDTGFGRSLAVRLAQKGFRVYAACLTANGVEEIKAECSTVETMMLDVTDENQVQEAAARVDAENPEGLYALVNNAGVAKSGLIDWFGLSDFRFCMEVNFFGVVSVTKAFLPLIKRCKGRIVVVSSVAGVSCGYPLSAPYSASKHAVELFASSLRQELRAWGIKVSTINPGFHRTEMNKVAVKGLETCWSKVDPVIQAQYGQSYFEGCRDFVKTHTEDVVFDPINVVRAMEHAVTCTRPRIQYRVGLDAKYGLVWTQIFPLRVGEKLIYALTTNKKMRSIVGLPTAPRAEDAQADAPFGDHRG 370          
BLAST of EWM28695.1 vs. NCBI_GenBank
Match: gi|585111089|gb|EWM28666.1| (retinol retinaldehyde reductase [Nannochloropsis gaditana])

HSP 1 Score: 407.912 bits (1047), Expect = 1.450e-138
Identity = 193/364 (53.02%), Postives = 257/364 (70.60%), Query Frame = 0
Query:    3 GCLEFWNNLCHIDLLEEWIWYSYFTGAWLLGPFMAFLIVVYDFCSGFAFPLWHVEPSRDKAIFITGCDTGFGRSLAVRLAQKGFRVYAACLTANGVEEIKAECSTVETMMLDVTDENQVQEAAARVDAENPEGLYALVNNAGVAKSGLIDWFGLSDFRFCMEVNFFGVVSVTKAFLPLIKRCKGRIVVVSSVAGVSCGYPLSAPYSASKHAVELFASSLRQELRAWGIKVSTINPGFHRTEMNKVAVKGLETCWSKVDPVIQAQYGQSYFEGCRDFVKTHTEDVVFDPINVVRAMEHAVTCTRPRIQYRVGLDAKYGLVWTQIFPLRVGEKLIYALTTNKKMRSIVGLPTAPRAEDAQADAPFG 366
            G + + NN+ HI + E+  +Y++F  AW  GP +  L+ ++D  +GF F +++VEPS DK + ITGCDTGFG+SLA+ L +KGF+VYA+CLT    +E+K EC  ++T++LDVT E+QV   AAR+ A +P+G++ALVNNAGV+++GLIDW  +SDFRFCMEVN+F VVSVTKAFLP +K+ KGRI+++SS AGV+CGYP++  YS+SKHA+ELFAS+LRQELR WGI VSTINPGFHRTE+N  A   L+  + K    IQ +YG+ Y     +     TE    DP NV+RA  HA+T TRP++QYRVG+DAK    + QIFPLRVGE   Y  +T   MR + G      A   Q  AP G
Sbjct:    2 GLINWANNVAHIPVFEDMCYYNFFFWAWFWGPLLGALVFLHDATTGFFFSIFYVEPSEDKVVVITGCDTGFGKSLALDLGKKGFKVYASCLTQRSADELKKECDALQTIILDVTKEDQVASVAARISAAHPQGIFALVNNAGVSRAGLIDWLNMSDFRFCMEVNYFSVVSVTKAFLPSLKKSKGRIIMMSSAAGVACGYPVTCAYSSSKHALELFASALRQELRTWGITVSTINPGFHRTEINHNAAGALKATFEKAPREIQEEYGEEYLGATAEATTRFTETQALDPKNVIRAYVHAITSTRPKVQYRVGIDAKGLFPFLQIFPLRVGEICAYYASTTSGMRVVRG------ARWDQGKAPVG 359          
BLAST of EWM28695.1 vs. NCBI_GenBank
Match: gi|585106696|gb|EWM25060.1| (serine threonine-protein kinase dclk3 [Nannochloropsis gaditana])

HSP 1 Score: 247.669 bits (631), Expect = 9.246e-70
Identity = 128/336 (38.10%), Postives = 197/336 (58.63%), Query Frame = 0
Query:    5 LEFWNNLCHIDLLEEWIWYSYFTGAWLLGPFMAFLIVVYDFCSGFAFPL-WHVEPSRDKAIFITGCDTGFGRSLAVRLAQKGFRVYAACLTANGVEEIKAECS----TVETMMLDVTDENQVQEAAARVDAENPEGLYALVNNAGVAKSGLIDWFGLSDFRFCMEVNFFGVVSVTKAFLPLIKRCKGRIVVVSSVAGVSCGYPLSAPYSASKHAVELFASSLRQELRAWGIKVSTINPGFHRTEMNKVAVKGLETCWSKVDPVIQAQYGQSYFEGCRDFVKTHTEDVVFDPINVVRAMEHAVTCTRPRIQYRVGLDAKYGLVWTQIFPLRVGEKLI 335
            L   N++ H+ ++++  W+ Y     LLGP  A  +++       +  L   +E  + +A+ ITGCDTGFG  LA+ L +KG+RVYA CLT   V E+K + +    ++ ++++DVT +  +     ++  E+P+ L+A+V NAGV + GL+DW  L+ +R  MEVN F +++  KA LPL+K  KGRIV V+S+AG+  G P  + Y+ASKHA E F++SLR EL  WGI+V T+NP FHRT ++  A + ++  +  +D   QA+YG  Y    +      T D  +DP +VV  +  A T   PR QY VG DA + L+     P    EK++
Sbjct: 1211 LNLMNDIMHLPIVDDIAWHLYHFVRLLLGPLWALGLLISFLVKLLSGALVTRLEQPKGRAVLITGCDTGFGYDLAIALVKKGWRVYAGCLTQAAVAELKTKAAGSAGSMVSVLMDVTKQADIDRVVEQIAKESPKQLFAVVCNAGVGRGGLVDWTPLATYRAIMEVNLFAMIATCKACLPLLKESKGRIVNVTSMAGIFLGAPCMSAYAASKHAAEAFSTSLRFELEGWGIRVVTVNPSFHRTRISTNAAETVKQAYDDLDAKTQAEYGLEYLRAVQKLTSDQT-DGCWDPRHVVNTLVRATTAVSPRTQYIVGADATFCLLPLMNLPTPDIEKIV 1545          
BLAST of EWM28695.1 vs. NCBI_GenBank
Match: gi|260805510|ref|XP_002597630.1| (retinol dehydrogenase, retinaldehyde reductase [Branchiostoma floridae] >gi|229282895|gb|EEN53642.1| retinol dehydrogenase, retinaldehyde reductase [Branchiostoma floridae])

HSP 1 Score: 216.468 bits (550), Expect = 3.873e-64
Identity = 118/291 (40.55%), Postives = 175/291 (60.14%), Query Frame = 0
Query:   55 HVEPSRDKAIFITGCDTGFGRSLAVRLAQKGFRVYAACLTANGVEEIKAECST-VETMMLDVTDENQVQEAAARVD-AENPEGLYALVNNAGVAKSGL--IDWFGLSDFRFCMEVNFFGVVSVTKAFLPLIKRCKGRIVVVSSVAGVSCGYPLSAPYSASKHAVELFASSLRQELRAWGIKVSTINPGFHRTEMN--KVAVKGLETCWSKVDPVIQAQYGQSYFEGCRDFVKTHTEDVVFDPINVVRAMEHAVTCTRPRIQYRVGLDAKYGLVWTQIFPLRVGEKLIYALT 339
            +V    DK + ITGCDTGFG  LA RL Q G RV+A CLT  GV E++  CS  ++ + +DVT  + V+ A   V+ A   +GL+ LVNNAG+  SG+  ++W  ++D++  ++VN  G++ VT+ FLPL+KR +GR+V V+SVAG         PYS SK  VE F+ SLR+ +R +G+KV  I P F RT +N  +V ++ L+  W +  P  + +YGQ + +  +D +    +    DP+ VV AMEHA+  TRPR +Y VG DA    V     P  +G+ ++  L+
Sbjct:   28 YVSQLTDKTVLITGCDTGFGNLLARRLDQLGLRVFAGCLTEAGVAELRQSCSERLQPIRMDVTSSDSVKTAFRVVEKAVGSKGLWGLVNNAGIVGSGVGAMEWSTVADYQAVIDVNLLGMIDVTRTFLPLLKRSRGRVVNVASVAG-RLALNYITPYSVSKFGVEAFSDSLRRSMRCFGVKVHIIEPSFFRTNINNMEVIIRLLDNIWQRQSPETKKEYGQEFLQATKDVI-IAGDGRKLDPVAVVDAMEHALCATRPRSRYVVGWDAWLVFVPISWLPTELGDLVLRVLS 316          
BLAST of EWM28695.1 vs. NCBI_GenBank
Match: gi|260820445|ref|XP_002605545.1| (retinol dehydrogenase, retinaldehyde reductase [Branchiostoma floridae] >gi|229290879|gb|EEN61555.1| retinol dehydrogenase, retinaldehyde reductase [Branchiostoma floridae])

HSP 1 Score: 215.698 bits (548), Expect = 5.408e-64
Identity = 119/295 (40.34%), Postives = 176/295 (59.66%), Query Frame = 0
Query:   49 FAFPLWHVEPSR-----DKAIFITGCDTGFGRSLAVRLAQKGFRVYAACLTANGVEEIKAECST-VETMMLDVTDENQVQEAAARV-DAENPEGLYALVNNAGVA--KSGLIDWFGLSDFRFCMEVNFFGVVSVTKAFLPLIKRCKGRIVVVSSVAGVSCGYPLSAPYSASKHAVELFASSLRQELRAWGIKVSTINPGFHRTEM-NKVAVKG-LETCWSKVDPVIQAQYGQSYFEGCRDFVKTHTEDVVFDPINVVRAMEHAVTCTRPRIQYRVGLDAKYGLVWTQIFPLRVGE 332
            ++   W +E  R     DK + ITGCDTGFG  LA RL Q G RV+A CLT  GV E++  CS  ++ + +DV+  + VQ+A   V +A   +GL+ LVNNAG+A    G +DW    D++ C++VN  G++ VTK FLPL+K+ +GR+V VSS AG       + PY+  K+ VE F+  LR+ +R +G+KV  I PGFHRTE+ N+  V G L+  W +  P  + +YG  + +  +D+ K     ++ DP+ VV AMEHA+  T PR +Y +G DA+   +     P  +G+
Sbjct:    2 YSVVTWWLERGRLSQLTDKTVLITGCDTGFGNLLAKRLDQLGLRVFAGCLTEAGVAELRQSCSERLQPIRMDVSSSDSVQDAFRVVKEAVGSKGLWGLVNNAGIAGVSGGTMDWATKEDYQACLKVNLLGMIDVTKTFLPLLKKSRGRVVNVSSAAG-RMAVQDAGPYTVCKYGVEAFSDCLRRAMRYFGVKVHIIEPGFHRTEITNQEMVLGLLDQIWQRQSPETRTEYGVEFLQASKDY-KVSLGRLMQDPVAVVDAMEHALCATHPRSRYVIGWDARLVAIPMSWLPTDLGD 294          
BLAST of EWM28695.1 vs. NCBI_GenBank
Match: gi|260809626|ref|XP_002599606.1| (retinol dehydrogenase, retinaldehyde reductase [Branchiostoma floridae] >gi|229284886|gb|EEN55618.1| retinol dehydrogenase, retinaldehyde reductase [Branchiostoma floridae])

HSP 1 Score: 215.698 bits (548), Expect = 8.608e-64
Identity = 122/302 (40.40%), Postives = 178/302 (58.94%), Query Frame = 0
Query:   54 WHVEPSR-----DKAIFITGCDTGFGRSLAVRLAQKGFRVYAACLTANGVEEIKAECST-VETMMLDVTDENQVQEAAARV-DAENPEGLYALVNNAGVAK--SGLIDWFGLSDFRFCMEVNFFGVVSVTKAFLPLIKRCKGRIVVVSSVAGVSCGYPLSAPYSASKHAVELFASSLRQELRAWGIKVSTINPGFHRTEM--NKVAVKGLETCWSKVDPVIQAQYGQSYFEGCRDFVKTHTEDVVF------DPINVVRAMEHAVTCTRPRIQYRVGLDAKYGLVWTQIFPLRVGEKLIYAL 338
            W +E  R      K + ITGCDTGFG  LA RL Q G RV+A CLT  GV E++  CS  ++ + +DV+  + VQ+A   V +A   +GL+ LVNNAGV     G  +W  L D++  + VN  G++ VTK FLPL+K+ +GR+V V+S AG     PL  PY+ SK+ VE F+  LR+ +R +G+KV  I PG  RT+M  + + ++ L+  W +  P  +A+YG+ + +  +D       D++F      DP+ VV AMEHA+  T PR +Y VG DA++  V T   P  +G+ LI+ L
Sbjct:   22 WWLEKGRLSQLTGKTVLITGCDTGFGNLLARRLDQLGLRVFAGCLTEAGVAELRQSCSERLQPIRMDVSSSDSVQDAFRVVKEAVGSKGLHGLVNNAGVTGVFGGTTEWATLEDYQAVLNVNLLGMIDVTKTFLPLLKKSRGRVVNVASAAG-RMANPLGVPYTVSKYGVEAFSDCLRRAMRCFGVKVHIIEPGLFRTDMTNHDIILRRLDQTWQRQTPETKAEYGEEFLQAAKD-------DIIFGTRFLQDPVAVVDAMEHALCATHPRSRYVVGWDARFITVPTSWLPTDLGD-LIFLL 314          
BLAST of EWM28695.1 vs. NCBI_GenBank
Match: gi|12006414|gb|AAG44847.1|AF283540_1 (microsomal retinol dehydrogenase 1 [Branchiostoma floridae])

HSP 1 Score: 213.772 bits (543), Expect = 4.347e-63
Identity = 114/290 (39.31%), Postives = 177/290 (61.03%), Query Frame = 0
Query:   54 WHVEPSR-----DKAIFITGCDTGFGRSLAVRLAQKGFRVYAACLTANGVEEIKAECST-VETMMLDVTDENQVQEAAARV-DAENPEGLYALVNNAGV--AKSGLIDWFGLSDFRFCMEVNFFGVVSVTKAFLPLIKRCKGRIVVVSSVAGVSCGYPLSAPYSASKHAVELFASSLRQELRAWGIKVSTINPGFHRTEMN--KVAVKGLETCWSKVDPVIQAQYGQSYFEGCRDFVKTHTEDVVFDPINVVRAMEHAVTCTRPRIQYRVGLDAKYGLVWTQIFPLRVGE 332
            W +E  R     DK + ITGCDTGFG  LA RL Q G RV+A CLT  GV E++  CS  ++ + +DV+  + VQ+A   V +A   +GL+ LVNNAG+     G ++W  + D++  + VN  G++ VTK FLPL+K+  GR+V V+S AG     P + PY+ +K+ VE F+ SLR+ +R +G+KV  I PG+ RTE+N  + A++ L+  W ++ P  + +YG+ + +  +D +   ++  + DP+ VV AMEHA+  T PR +Y +G DA++  V     P  +G+
Sbjct:   22 WWLERGRLSQLTDKTVLITGCDTGFGNLLAKRLDQLGLRVFAGCLTEAGVAELRQSCSERLQPIRMDVSSSDSVQDAFRVVKEAVGSKGLWGLVNNAGILGVAGGTMEWATMEDYQAVLNVNLLGMIDVTKTFLPLLKKSSGRVVNVASAAG-RVAVPDAGPYTVAKYGVEAFSDSLRRAMRYFGVKVHIIEPGYFRTEINNQENALRRLDDIWQRLSPETRTEYGEEFLQAGKDAI-IASDRFMQDPVAVVDAMEHALCATHPRSRYVIGWDARFIFVPICWLPTDLGD 309          
BLAST of EWM28695.1 vs. NCBI_GenBank
Match: gi|1126181038|ref|XP_019622982.1| (PREDICTED: retinol dehydrogenase 16-like isoform X2 [Branchiostoma belcheri])

HSP 1 Score: 212.616 bits (540), Expect = 1.214e-62
Identity = 117/290 (40.34%), Postives = 171/290 (58.97%), Query Frame = 0
Query:   54 WHVEPSR-----DKAIFITGCDTGFGRSLAVRLAQKGFRVYAACLTANGVEEIKAECST-VETMMLDVTDENQVQEAAARVD-AENPEGLYALVNNAGV--AKSGLIDWFGLSDFRFCMEVNFFGVVSVTKAFLPLIKRCKGRIVVVSSVAGVSCGYPLSAPYSASKHAVELFASSLRQELRAWGIKVSTINPGFHRTEMNKVA--VKGLETCWSKVDPVIQAQYGQSYFEGCRDFVKTHTEDVVFDPINVVRAMEHAVTCTRPRIQYRVGLDAKYGLVWTQIFPLRVGE 332
            W +E  R     DK + ITGCDTGFG  LA RL Q G RV+A CLT  GV E++  CS  ++ + +DVT  + VQ+A   V+ A   +GL+ LVNNAG+     G ++W  L D++  + VN  G++ VTK FLPLIK+ +GRIV V+S  G     P  APY+ SK+ VE F+  LR+ +R +GIKV  I PGF RT +N     ++ L+  W +  P  + +YG+ + +  +D +   +E  + DP+ VV AM+HA+  T PR +Y VG D ++  +     P  +G+
Sbjct:   22 WWLERGRLSQLTDKTVLITGCDTGFGNLLARRLDQLGLRVFAGCLTEAGVAELRQACSERLQPIQMDVTKTDSVQDAFRLVEQAVGSKGLWGLVNNAGILGVMGGTMEWATLEDYQAVLSVNLLGMIDVTKTFLPLIKKSRGRIVNVASGVG-RLAMPQGAPYTVSKYGVEAFSDCLRRAMRCFGIKVHIIEPGFFRTPINNQENLLRRLDQTWQRQSPETKTEYGEEFLQAAKDGI-VASERFMEDPVLVVDAMDHALCATHPRSRYVVGWDVRFMFMPISWLPTDLGD 309          
BLAST of EWM28695.1 vs. NCBI_GenBank
Match: gi|1191029012|ref|XP_020917493.1| (17-beta-hydroxysteroid dehydrogenase type 6-like [Exaiptasia pallida])

HSP 1 Score: 211.46 bits (537), Expect = 3.855e-62
Identity = 121/295 (41.02%), Postives = 169/295 (57.29%), Query Frame = 0
Query:   55 HVEPSRDKAIFITGCDTGFGRSLAVRLAQKGFRVYAACLTANGVEEIKAECST-VETMMLDVTDENQVQEAAARVDAENP--EGLYALVNNAGVAKSGLIDWFGLSDFRFCMEVNFFGVVSVTKAFLPLIKRCKGRIVVVSSVAGVSCGYPLSAPYSASKHAVELFASSLRQELRAWGIKVSTINPGFHRTEMNKVA--VKGLETCWSKVDPVIQAQYGQSYFEGCRDFVKTHTEDVVFDP--INVVRAMEHAVTCTRPRIQYRVGLDAKYGLVWTQIFPLRVGEKLIYALTTNK 342
             V+   DK + ITGCD GFG+  A+RL Q GF V A CLT    +E+K E S  + T  LDVT  +QVQ+   +V A  P  +GL+ +VNNAGVA  GL+DW  L  F+   +VN +G++ VTK FLPLIK+ KGRIV V+S  G +C  P +  YS SK A E F+ +LR+E+  +G+KVS + PGF +T M   A         W+K+D   Q +YG+ ++    + +     D    P    V+ A+EHAVT TRP  +Y +G DA    +W    P  VG+ ++  L   +
Sbjct:   36 RVQNPDDKYVLITGCDRGFGKMAAIRLDQLGFHVIATCLTDESQKELKEEASNKLTTFKLDVTKCDQVQDVYHKVTALIPRDKGLWGVVNNAGVATVGLVDWVSLETFKRSADVNLWGMIDVTKTFLPLIKKTKGRIVNVTSXGGRAC-LPNAVAYSVSKFAAEAFSDALRREIADFGVKVSIVEPGFFQTPMVTKANLSNAWRDVWNKLDKEKQEEYGEEFYXIQVENMLVGMVDTCCSPSTYKVIDAIEHAVTSTRPNSRYVIGWDANLLWIWLSRLPASVGDFIVQMLANKR 329          
BLAST of EWM28695.1 vs. NCBI_GenBank
Match: gi|999980279|gb|KXJ19453.1| (17-beta-hydroxysteroid dehydrogenase type 6 [Exaiptasia pallida])

HSP 1 Score: 211.075 bits (536), Expect = 7.650e-62
Identity = 121/295 (41.02%), Postives = 169/295 (57.29%), Query Frame = 0
Query:   55 HVEPSRDKAIFITGCDTGFGRSLAVRLAQKGFRVYAACLTANGVEEIKAECST-VETMMLDVTDENQVQEAAARVDAENP--EGLYALVNNAGVAKSGLIDWFGLSDFRFCMEVNFFGVVSVTKAFLPLIKRCKGRIVVVSSVAGVSCGYPLSAPYSASKHAVELFASSLRQELRAWGIKVSTINPGFHRTEMNKVA--VKGLETCWSKVDPVIQAQYGQSYFEGCRDFVKTHTEDVVFDP--INVVRAMEHAVTCTRPRIQYRVGLDAKYGLVWTQIFPLRVGEKLIYALTTNK 342
             V+   DK + ITGCD GFG+  A+RL Q GF V A CLT    +E+K E S  + T  LDVT  +QVQ+   +V A  P  +GL+ +VNNAGVA  GL+DW  L  F+   +VN +G++ VTK FLPLIK+ KGRIV V+S  G +C  P +  YS SK A E F+ +LR+E+  +G+KVS + PGF +T M   A         W+K+D   Q +YG+ ++    + +     D    P    V+ A+EHAVT TRP  +Y +G DA    +W    P  VG+ ++  L   +
Sbjct:   47 RVQNPDDKYVLITGCDRGFGKMAAIRLDQLGFHVIATCLTDESQKELKEEASNKLTTFKLDVTKCDQVQDVYHKVTALIPRDKGLWGVVNNAGVATVGLVDWVSLETFKRSADVNLWGMIDVTKTFLPLIKKTKGRIVNVTSXGGRAC-LPNAVAYSVSKFAAEAFSDALRREIADFGVKVSIVEPGFFQTPMVTKANLSNAWRDVWNKLDKEKQEEYGEEFYXIQVENMLVGMVDTCCSPSTYKVIDAIEHAVTSTRPNSRYVIGWDANLLWIWLSRLPASVGDFIVQMLANKR 340          
The following BLAST results are available for this feature:
BLAST of EWM28695.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111118|gb|EWM28695.1|0.000e+0100.00retinol retinaldehyde reductase [Nannochloropsis g... [more]
gi|585111089|gb|EWM28666.1|1.450e-13853.02retinol retinaldehyde reductase [Nannochloropsis g... [more]
gi|585106696|gb|EWM25060.1|9.246e-7038.10serine threonine-protein kinase dclk3 [Nannochloro... [more]
gi|260805510|ref|XP_002597630.1|3.873e-6440.55retinol dehydrogenase, retinaldehyde reductase [Br... [more]
gi|260820445|ref|XP_002605545.1|5.408e-6440.34retinol dehydrogenase, retinaldehyde reductase [Br... [more]
gi|260809626|ref|XP_002599606.1|8.608e-6440.40retinol dehydrogenase, retinaldehyde reductase [Br... [more]
gi|12006414|gb|AAG44847.1|AF283540_14.347e-6339.31microsomal retinol dehydrogenase 1 [Branchiostoma ... [more]
gi|1126181038|ref|XP_019622982.1|1.214e-6240.34PREDICTED: retinol dehydrogenase 16-like isoform X... [more]
gi|1191029012|ref|XP_020917493.1|3.855e-6241.0217-beta-hydroxysteroid dehydrogenase type 6-like [... [more]
gi|999980279|gb|KXJ19453.1|7.650e-6241.0217-beta-hydroxysteroid dehydrogenase type 6 [Exaip... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1873rna1873Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications