EWM28666.1, cds1867 (CDS) Nannochloropsis gaditana

Overview
NameEWM28666.1
Unique Namecds1867
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:343826..344134 -
Alignment locationCM002458.1:342858..343658 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28666.1
Productretinol retinaldehyde reductase
Orig transcript idgnl|cribi|Naga_100002g152.4785.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:343826..344134 -
CM002458.1supercontigCM002458.1:342858..343658 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR020904Sc_DH/Rdtase_CS
IPR016040NAD(P)-bd_dom
IPR013968PKS_KR
IPR002198DH_sc/Rdtase_SDR
IPR002347Glc/ribitol_DH
Homology
BLAST of EWM28666.1 vs. NCBI_GenBank
Match: gi|585111089|gb|EWM28666.1| (retinol retinaldehyde reductase [Nannochloropsis gaditana])

HSP 1 Score: 769.229 bits (1985), Expect = 0.000e+0
Identity = 369/369 (100.00%), Postives = 369/369 (100.00%), Query Frame = 0
Query:    1 MGLINWANNVAHIPVFEDMCYYNFFFWAWFWGPLLGALVFLHDATTGFFFSIFYVEPSEDKVVVITGCDTGFGKSLALDLGKKGFKVYASCLTQRSADELKKECDALQTIILDVTKEDQVASVAARISAAHPQGIFALVNNAGVSRAGLIDWLNMSDFRFCMEVNYFSVVSVTKAFLPSLKKSKGRIIMMSSAAGVACGYPVTCAYSSSKHALELFASALRQELRTWGITVSTINPGFHRTEINHNAAGALKATFEKAPREIQEEYGEEYLGATAEATTRFTETQALDPKNVIRAYVHAITSTRPKVQYRVGIDAKGLFPFLQIFPLRVGEICAYYASTTSGMRVVRGARWDQGKAPVGMSTTDTIPEA 369
            MGLINWANNVAHIPVFEDMCYYNFFFWAWFWGPLLGALVFLHDATTGFFFSIFYVEPSEDKVVVITGCDTGFGKSLALDLGKKGFKVYASCLTQRSADELKKECDALQTIILDVTKEDQVASVAARISAAHPQGIFALVNNAGVSRAGLIDWLNMSDFRFCMEVNYFSVVSVTKAFLPSLKKSKGRIIMMSSAAGVACGYPVTCAYSSSKHALELFASALRQELRTWGITVSTINPGFHRTEINHNAAGALKATFEKAPREIQEEYGEEYLGATAEATTRFTETQALDPKNVIRAYVHAITSTRPKVQYRVGIDAKGLFPFLQIFPLRVGEICAYYASTTSGMRVVRGARWDQGKAPVGMSTTDTIPEA
Sbjct:    1 MGLINWANNVAHIPVFEDMCYYNFFFWAWFWGPLLGALVFLHDATTGFFFSIFYVEPSEDKVVVITGCDTGFGKSLALDLGKKGFKVYASCLTQRSADELKKECDALQTIILDVTKEDQVASVAARISAAHPQGIFALVNNAGVSRAGLIDWLNMSDFRFCMEVNYFSVVSVTKAFLPSLKKSKGRIIMMSSAAGVACGYPVTCAYSSSKHALELFASALRQELRTWGITVSTINPGFHRTEINHNAAGALKATFEKAPREIQEEYGEEYLGATAEATTRFTETQALDPKNVIRAYVHAITSTRPKVQYRVGIDAKGLFPFLQIFPLRVGEICAYYASTTSGMRVVRGARWDQGKAPVGMSTTDTIPEA 369          
BLAST of EWM28666.1 vs. NCBI_GenBank
Match: gi|585111118|gb|EWM28695.1| (retinol retinaldehyde reductase [Nannochloropsis gaditana])

HSP 1 Score: 394.045 bits (1011), Expect = 4.654e-133
Identity = 193/364 (53.02%), Postives = 257/364 (70.60%), Query Frame = 0
Query:    2 GLINWANNVAHIPVFEDMCYYNFFFWAWFWGPLLGALVFLHDATTGFFFSIFYVEPSEDKVVVITGCDTGFGKSLALDLGKKGFKVYASCLTQRSADELKKECDALQTIILDVTKEDQVASVAARISAAHPQGIFALVNNAGVSRAGLIDWLNMSDFRFCMEVNYFSVVSVTKAFLPSLKKSKGRIIMMSSAAGVACGYPVTCAYSSSKHALELFASALRQELRTWGITVSTINPGFHRTEINHNAAGALKATFEKAPREIQEEYGEEYLGATAEATTRFTETQALDPKNVIRAYVHAITSTRPKVQYRVGIDAKGLFPFLQIFPLRVGEICAYYASTTSGMRVVRG------ARWDQGKAPVG 359
            G + + NN+ HI + E+  +Y++F  AW  GP +  L+ ++D  +GF F +++VEPS DK + ITGCDTGFG+SLA+ L +KGF+VYA+CLT    +E+K EC  ++T++LDVT E+QV   AAR+ A +P+G++ALVNNAGV+++GLIDW  +SDFRFCMEVN+F VVSVTKAFLP +K+ KGRI+++SS AGV+CGYP++  YS+SKHA+ELFAS+LRQELR WGI VSTINPGFHRTE+N  A   L+  + K    IQ +YG+ Y     +     TE    DP NV+RA  HA+T TRP++QYRVG+DAK    + QIFPLRVGE   Y  +T   MR + G      A   Q  AP G
Sbjct:    3 GCLEFWNNLCHIDLLEEWIWYSYFTGAWLLGPFMAFLIVVYDFCSGFAFPLWHVEPSRDKAIFITGCDTGFGRSLAVRLAQKGFRVYAACLTANGVEEIKAECSTVETMMLDVTDENQVQEAAARVDAENPEGLYALVNNAGVAKSGLIDWFGLSDFRFCMEVNFFGVVSVTKAFLPLIKRCKGRIVVVSSVAGVSCGYPLSAPYSASKHAVELFASSLRQELRAWGIKVSTINPGFHRTEMNKVAVKGLETCWSKVDPVIQAQYGQSYFEGCRDFVKTHTEDVVFDPINVVRAMEHAVTCTRPRIQYRVGLDAKYGLVWTQIFPLRVGEKLIYALTTNKKMRSIVGLPTAPRAEDAQADAPFG 366          
BLAST of EWM28666.1 vs. NCBI_GenBank
Match: gi|585106696|gb|EWM25060.1| (serine threonine-protein kinase dclk3 [Nannochloropsis gaditana])

HSP 1 Score: 257.684 bits (657), Expect = 3.654e-73
Identity = 137/343 (39.94%), Postives = 212/343 (61.81%), Query Frame = 0
Query:    1 MGLINWANNVAHIPVFEDMCYYNFFFWAWFWGPL--LGALV-FLHDATTGFFFSIFYVEPSEDKVVVITGCDTGFGKSLALDLGKKGFKVYASCLTQRSADELKKEC----DALQTIILDVTKEDQVASVAARISAAHPQGIFALVNNAGVSRAGLIDWLNMSDFRFCMEVNYFSVVSVTKAFLPSLKKSKGRIIMMSSAAGVACGYPVTCAYSSSKHALELFASALRQELRTWGITVSTINPGFHRTEINHNAAGALKATFEKAPREIQEEYGEEYLGATAEATTRFTETQALDPKNVIRAYVHAITSTRPKVQYRVGIDAK-GLFPFLQIFPLRVGEICAY 335
            + ++N  N++ H+P+ +D+ ++ + F     GPL  LG L+ FL    +G    +  +E  + + V+ITGCDTGFG  LA+ L KKG++VYA CLTQ +  ELK +      ++ ++++DVTK+  +  V  +I+   P+ +FA+V NAGV R GL+DW  ++ +R  MEVN F++++  KA LP LK+SKGRI+ ++S AG+  G P   AY++SKHA E F+++LR EL  WGI V T+NP FHRT I+ NAA  +K  ++    + Q EYG EYL A  + T+  T+    DP++V+   V A T+  P+ QY VG DA   L P + +    + +I ++
Sbjct: 1208 IKMLNLMNDIMHLPIVDDIAWHLYHFVRLLLGPLWALGLLISFLVKLLSGAL--VTRLEQPKGRAVLITGCDTGFGYDLAIALVKKGWRVYAGCLTQAAVAELKTKAAGSAGSMVSVLMDVTKQADIDRVVEQIAKESPKQLFAVVCNAGVGRGGLVDWTPLATYRAIMEVNLFAMIATCKACLPLLKESKGRIVNVTSMAGIFLGAPCMSAYAASKHAAEAFSTSLRFELEGWGIRVVTVNPSFHRTRISTNAAETVKQAYDDLDAKTQAEYGLEYLRAVQKLTSDQTDG-CWDPRHVVNTLVRATTAVSPRTQYIVGADATFCLLPLMNLPTPDIEKIVSF 1547          
BLAST of EWM28666.1 vs. NCBI_GenBank
Match: gi|1191029012|ref|XP_020917493.1| (17-beta-hydroxysteroid dehydrogenase type 6-like [Exaiptasia pallida])

HSP 1 Score: 214.927 bits (546), Expect = 1.912e-63
Identity = 123/296 (41.55%), Postives = 174/296 (58.78%), Query Frame = 0
Query:   55 VEPSEDKVVVITGCDTGFGKSLALDLGKKGFKVYASCLTQRSADELKKEC-DALQTIILDVTKEDQVASVAARISAAHP--QGIFALVNNAGVSRAGLIDWLNMSDFRFCMEVNYFSVVSVTKAFLPSLKKSKGRIIMMSSAAGVACGYPVTCAYSSSKHALELFASALRQELRTWGITVSTINPGFHRTEI--NHNAAGALKATFEKAPREIQEEYGEEYLGATAEATTRFTETQALDPK--NVIRAYVHAITSTRPKVQYRVGIDAKGLFPFLQIFPLRVGEICAYYASTTSGM 343
            V+  +DK V+ITGCD GFGK  A+ L + GF V A+CLT  S  ELK+E  + L T  LDVTK DQV  V  +++A  P  +G++ +VNNAGV+  GL+DW+++  F+   +VN + ++ VTK FLP +KK+KGRI+ ++S  G AC  P   AYS SK A E F+ ALR+E+  +G+ VS + PGF +T +    N + A +  + K  +E QEEYGEE+     E            P    VI A  HA+TSTRP  +Y +G DA  L+ +L   P  VG+      +   G+
Sbjct:   37 VQNPDDKYVLITGCDRGFGKMAAIRLDQLGFHVIATCLTDESQKELKEEASNKLTTFKLDVTKCDQVQDVYHKVTALIPRDKGLWGVVNNAGVATVGLVDWVSLETFKRSADVNLWGMIDVTKTFLPLIKKTKGRIVNVTSXGGRAC-LPNAVAYSVSKFAAEAFSDALRREIADFGVKVSIVEPGFFQTPMVTKANLSNAWRDVWNKLDKEKQEEYGEEFYXIQVENMLVGMVDTCCSPSTYKVIDAIEHAVTSTRPNSRYVIGWDANLLWIWLSRLPASVGDFIVQMLANKRGV 331          
BLAST of EWM28666.1 vs. NCBI_GenBank
Match: gi|999980279|gb|KXJ19453.1| (17-beta-hydroxysteroid dehydrogenase type 6 [Exaiptasia pallida])

HSP 1 Score: 214.542 bits (545), Expect = 3.274e-63
Identity = 123/296 (41.55%), Postives = 174/296 (58.78%), Query Frame = 0
Query:   55 VEPSEDKVVVITGCDTGFGKSLALDLGKKGFKVYASCLTQRSADELKKEC-DALQTIILDVTKEDQVASVAARISAAHP--QGIFALVNNAGVSRAGLIDWLNMSDFRFCMEVNYFSVVSVTKAFLPSLKKSKGRIIMMSSAAGVACGYPVTCAYSSSKHALELFASALRQELRTWGITVSTINPGFHRTEI--NHNAAGALKATFEKAPREIQEEYGEEYLGATAEATTRFTETQALDPK--NVIRAYVHAITSTRPKVQYRVGIDAKGLFPFLQIFPLRVGEICAYYASTTSGM 343
            V+  +DK V+ITGCD GFGK  A+ L + GF V A+CLT  S  ELK+E  + L T  LDVTK DQV  V  +++A  P  +G++ +VNNAGV+  GL+DW+++  F+   +VN + ++ VTK FLP +KK+KGRI+ ++S  G AC  P   AYS SK A E F+ ALR+E+  +G+ VS + PGF +T +    N + A +  + K  +E QEEYGEE+     E            P    VI A  HA+TSTRP  +Y +G DA  L+ +L   P  VG+      +   G+
Sbjct:   48 VQNPDDKYVLITGCDRGFGKMAAIRLDQLGFHVIATCLTDESQKELKEEASNKLTTFKLDVTKCDQVQDVYHKVTALIPRDKGLWGVVNNAGVATVGLVDWVSLETFKRSADVNLWGMIDVTKTFLPLIKKTKGRIVNVTSXGGRAC-LPNAVAYSVSKFAAEAFSDALRREIADFGVKVSIVEPGFFQTPMVTKANLSNAWRDVWNKLDKEKQEEYGEEFYXIQVENMLVGMVDTCCSPSTYKVIDAIEHAVTSTRPNSRYVIGWDANLLWIWLSRLPASVGDFIVQMLANKRGV 342          
BLAST of EWM28666.1 vs. NCBI_GenBank
Match: gi|1191048459|ref|XP_020901939.1| (retinol dehydrogenase 2-like [Exaiptasia pallida] >gi|999974145|gb|KXJ13319.1| Retinol dehydrogenase 2 [Exaiptasia pallida])

HSP 1 Score: 193.741 bits (491), Expect = 2.168e-55
Identity = 109/286 (38.11%), Postives = 166/286 (58.04%), Query Frame = 0
Query:   48 FFFSIFYVEPSEDKVVVITGCDTGFGKSLALDLGKKGFKVYASCLTQRSADELKKEC-DALQTIILDVTKEDQVA----SVAARISAAHPQGIFALVNNAGVSRAGLIDWLNMSDFRFCMEVNYFSVVSVTKAFLPSLKKSKGRIIMMSSAAGVACGYPVTCAYSSSKHALELFASALRQELRTWGITVSTINPGFHRTEINHNAAGA--LKATFEKAPREIQEEYGEEYLGATAEATTRFTETQALDPKNVIRAYVHAITSTRPKVQYRVGIDAKGLFPFLQIFP 326
             F   F V   ++K VVITGCDTGFG  LA+ L   G  V+A CLT+    EL+ +C + LQT+ +DVTK + +      V   +       ++A+VNNAG+   GL+DW +    +   +VN + ++ VTKAFLP LKKSKGRI+ ++S AG         AYS SK+ ++ ++  LR+EL  +G+ V  I+PGF +T + ++AA    +K  +E    E +EEYG++ L    + T     +Q + P  V+ A  HA+TS+ PK++Y VG D + L+ +L + P
Sbjct:   23 LFCRDFKVPNLDNKCVVITGCDTGFGHQLAITLDALGLHVFAGCLTEEGEHELQTKCSERLQTVRMDVTKSEDIQRCLECVKGFLETVDNTVLWAVVNNAGIDICGLVDWTSTDTMKKVFDVNLWGLLDVTKAFLPLLKKSKGRIVNVASVAG-KLALAGAGAYSGSKYTVQCYSDVLRRELWHFGVGVHIIDPGFFKTNMTNSAAKCKVIKQLWENLSEEKREEYGQKCLNEALKLTEMLQYSQDMRP--VVDAMEHAVTSSHPKIRYLVGWDHRLLWRWLAMLP 305          
BLAST of EWM28666.1 vs. NCBI_GenBank
Match: gi|1126181038|ref|XP_019622982.1| (PREDICTED: retinol dehydrogenase 16-like isoform X2 [Branchiostoma belcheri])

HSP 1 Score: 192.971 bits (489), Expect = 4.382e-55
Identity = 112/283 (39.58%), Postives = 165/283 (58.30%), Query Frame = 0
Query:   60 DKVVVITGCDTGFGKSLALDLGKKGFKVYASCLTQRSADELKKEC-DALQTIILDVTKEDQVASVAARI--SAAHPQGIFALVNNAGV--SRAGLIDWLNMSDFRFCMEVNYFSVVSVTKAFLPSLKKSKGRIIMMSSAAGVACGYPVTCAYSSSKHALELFASALRQELRTWGITVSTINPGFHRTEINH--NAAGALKATFEKAPREIQEEYGEEYLGATAE---ATTRFTETQALDPKNVIRAYVHAITSTRPKVQYRVGIDAKGLFPFLQIFPLRVGEI 332
            DK V+ITGCDTGFG  LA  L + G +V+A CLT+    EL++ C + LQ I +DVTK D V   A R+   A   +G++ LVNNAG+     G ++W  + D++  + VN   ++ VTK FLP +KKS+GRI+ ++S  G     P    Y+ SK+ +E F+  LR+ +R +GI V  I PGF RT IN+  N    L  T+++   E + EYGEE+L A  +   A+ RF E    DP  V+ A  HA+ +T P+ +Y VG D + +F  +   P  +G++
Sbjct:   34 DKTVLITGCDTGFGNLLARRLDQLGLRVFAGCLTEAGVAELRQACSERLQPIQMDVTKTDSVQD-AFRLVEQAVGSKGLWGLVNNAGILGVMGGTMEWATLEDYQAVLSVNLLGMIDVTKTFLPLIKKSRGRIVNVASGVG-RLAMPQGAPYTVSKYGVEAFSDCLRRAMRCFGIKVHIIEPGFFRTPINNQENLLRRLDQTWQRQSPETKTEYGEEFLQAAKDGIVASERFME----DPVLVVDAMDHALCATHPRSRYVVGWDVRFMFMPISWLPTDLGDL 310          
BLAST of EWM28666.1 vs. NCBI_GenBank
Match: gi|676441948|ref|XP_009049650.1| (hypothetical protein LOTGIDRAFT_141736 [Lottia gigantea] >gi|556111037|gb|ESO99688.1| hypothetical protein LOTGIDRAFT_141736 [Lottia gigantea])

HSP 1 Score: 191.815 bits (486), Expect = 1.033e-54
Identity = 109/274 (39.78%), Postives = 161/274 (58.76%), Query Frame = 0
Query:   59 EDKVVVITGCDTGFGKSLALDLGKKGFKVYASCLTQRSADELKKECDA-LQTIILDVTKEDQVASVAARISAAHP--QGIFALVNNAGVS-RAGLIDWLNMSDFRFCMEVNYFSVVSVTKAFLPSLKKSKGRIIMMSSAAGVACGYPVTCAYSSSKHALELFASALRQELRTWGITVSTINPGFHRTEI--NHNAAGALKATFEKAPREIQEEYGEEYLGATAEATTRFTETQALDPKNVIRAYVHAITSTRPKVQYRVGIDAKGLFPFLQIFP 326
            +DK V+ITGCD+GFGK+ A+ L   GF V A+CLT+  AD L K C   L+TI+L+VT ED +      +    P  +G++ALVNNAGVS   GL +     DF  C +VN F ++ VT++FLP L+K +GR++ +SS  G     P+   YS+ K+ALE F+  LR+E+ + G++V  I PGF+ T I     + G LK  F K+  EIQE YG+++L    +  +        D + VIR    A+++  P+ +Y  G+DA+  F F+   P
Sbjct:   26 QDKYVLITGCDSGFGKATAIRLHSVGFNVIAACLTKEGADYLTKTCSTKLRTILLNVTSEDDIKKAVKTVKEIIPLNKGLWALVNNAGVSGLVGLFETTTRKDFLDCYKVNLFGLIDVTRSFLPLLRKGQGRVVNLSSITGRFSQIPII--YSTGKYALEGFSDCLRREVYSHGVSVYIIEPGFYNTGILTIERSLGGLKNAFYKSRSEIQEYYGQKFLKKLCDYMSWELNRATSDIEPVIRDIQRAVSAKYPQYRYLSGLDAQFKFRFMWTIP 297          
BLAST of EWM28666.1 vs. NCBI_GenBank
Match: gi|1005478814|ref|XP_015776116.1| (PREDICTED: retinol dehydrogenase 3-like isoform X3 [Acropora digitifera] >gi|1005478816|ref|XP_015776118.1| PREDICTED: retinol dehydrogenase 3-like isoform X3 [Acropora digitifera])

HSP 1 Score: 192.2 bits (487), Expect = 2.057e-54
Identity = 108/285 (37.89%), Postives = 164/285 (57.54%), Query Frame = 0
Query:   54 YVEPSEDKVVVITGCDTGFGKSLALDLGKKGFKVYASCLTQRSADELKKEC-DALQTIILDVTKEDQVASVAARISAAHP--QGIFALVNNAGVSRAGLIDWLNMSDFRFCMEVNYFSVVSVTKAFLPSLKKSKGRIIMMSSAAGVACGYPVTCAYSSSKHALELFASALRQELRTWGITVSTINPGFHRTEINH--NAAGALKATFEKAPREIQEEYGEEYLGATAEATTRFTETQALDPK--NVIRAYVHAITSTRPKVQYRVGIDAKGLFPFLQIFPLRVGE 331
            +V    +K V++TGCD+GFGK  AL+L + GF V+A+CLT+   +EL   C + L+TI LDVT   ++      +    P   G++ L+NNAG++R G ++W ++ D++   +VN + ++ VTK FLP +KK  GRII ++S AG A   P   +YS SK  +E F+ ALR+EL++ G+ VS I PGF +T I +  N  G  K  + K    ++EEYG  +   +     +        P    V+ A VHA+ S  PK +Y VG DAK L+ ++   P  VG+
Sbjct:   36 FVHGFHEKYVLLTGCDSGFGKVTALELDRLGFNVFATCLTKEGQEELNAVCSERLKTIHLDVTDSQEIRDALGFVMQNLPANTGLWGLINNAGIARIGPVEWQSLEDYKRVADVNLWGLIDVTKVFLPLIKKECGRIINLASIAGRA-SLPHASSYSISKFGVEAFSDALRRELKSRGVKVSVIEPGFFKTNITNKENLQGMWKELWAKLDPNLKEEYGYGFYQTSVSNMLKGMVDTCASPHLCKVVDAIVHALASQNPKSRYVVGWDAKLLWIWISWLPAPVGD 319          
BLAST of EWM28666.1 vs. NCBI_GenBank
Match: gi|1126181040|ref|XP_019622983.1| (PREDICTED: retinol dehydrogenase 16-like [Branchiostoma belcheri])

HSP 1 Score: 191.43 bits (485), Expect = 2.087e-54
Identity = 112/281 (39.86%), Postives = 165/281 (58.72%), Query Frame = 0
Query:   60 DKVVVITGCDTGFGKSLALDLGKKGFKVYASCLTQRSADELKKEC-DALQTIILDVTKEDQVASVAARI--SAAHPQGIFALVNNAGVSRA--GLIDWLNMSDFRFCMEVNYFSVVSVTKAFLPSLKKSKGRIIMMSSAAG-VACGYPVTCAYSSSKHALELFASALRQELRTWGITVSTINPGFHRTEIN--HNAAGALKATFEKAPREIQEEYGEEYLGATAEATTRFTETQALDPKNVIRAYVHAITSTRPKVQYRVGIDAKGLFPFLQIFPLRVGEI 332
            DK V+ITGCDTGFG  LA  L + G +V+A CLT+    EL+++C + LQ I +DVTK D V   A R+   A   +G++ LVNNAG+     G ++W  + D++  + VN   ++ VTK FLP LKKS+GRI+ ++S AG +A        Y+ SK+  E F+ +LR+ +R +GI V  I PGF RT IN   N    L  T+++   E + EYGE +L AT +A      +   DP  V+ A  HA+ +T P+ +Y VG DA+ +F  +   P  +G++
Sbjct:   34 DKTVLITGCDTGFGNLLARRLDQLGLRVFAGCLTEAGVAELRQDCSERLQPIQMDVTKTDSVQD-AFRVVKQAVGSKGLWGLVNNAGILGVITGTMEWATLEDYQAVLNVNLLGMIDVTKTFLPLLKKSRGRIVNVASGAGRIALPNAYGGPYAVSKYGAEAFSDSLRRAMRCFGIKVHIIEPGFFRTPINSQENLLRRLDQTWQRQSLETKTEYGEGFLQATKDAIVAADRSMQ-DPVAVLDALEHALCATHPRSRYVVGWDARYVFMPISWLPTDLGDL 312          
The following BLAST results are available for this feature:
BLAST of EWM28666.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111089|gb|EWM28666.1|0.000e+0100.00retinol retinaldehyde reductase [Nannochloropsis g... [more]
gi|585111118|gb|EWM28695.1|4.654e-13353.02retinol retinaldehyde reductase [Nannochloropsis g... [more]
gi|585106696|gb|EWM25060.1|3.654e-7339.94serine threonine-protein kinase dclk3 [Nannochloro... [more]
gi|1191029012|ref|XP_020917493.1|1.912e-6341.5517-beta-hydroxysteroid dehydrogenase type 6-like [... [more]
gi|999980279|gb|KXJ19453.1|3.274e-6341.5517-beta-hydroxysteroid dehydrogenase type 6 [Exaip... [more]
gi|1191048459|ref|XP_020901939.1|2.168e-5538.11retinol dehydrogenase 2-like [Exaiptasia pallida] ... [more]
gi|1126181038|ref|XP_019622982.1|4.382e-5539.58PREDICTED: retinol dehydrogenase 16-like isoform X... [more]
gi|676441948|ref|XP_009049650.1|1.033e-5439.78hypothetical protein LOTGIDRAFT_141736 [Lottia gig... [more]
gi|1005478814|ref|XP_015776116.1|2.057e-5437.89PREDICTED: retinol dehydrogenase 3-like isoform X3... [more]
gi|1126181040|ref|XP_019622983.1|2.087e-5439.86PREDICTED: retinol dehydrogenase 16-like [Branchio... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1872rna1872Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications