EWM28772.1, cds1866 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28772.1 vs. NCBI_GenBank
Match: gi|585111195|gb|EWM28772.1| (hypothetical protein Naga_100002g154 [Nannochloropsis gaditana]) HSP 1 Score: 1357.04 bits (3511), Expect = 0.000e+0 Identity = 669/669 (100.00%), Postives = 669/669 (100.00%), Query Frame = 0
Query: 1 MTVDLSRGGRKTTSSSAAGGAAATDSHRLDQDGVPNEGVLQAIEYLGHTCSVHDVVARCGLPQDLVEAEMAAFLRVSNGFFEVLASPSANDDVFEVKNSDDQQANAQHLQRRDVEYVANVFSTDNVRYVYPSGLRSLLRRRFVLMRLREAGVRVLHVAFKVVRISFGILLMLSLLIVVIVIVVVVARSGGGEHRHGQLDMLRVMHRPRRHYLGGGGMGGGDWRDMYYMWWWWNYNPFLFGRDPQMQAQRWREQQTRRRRVLGAMDEEGGRAREAGEGGDPSPGSRRRTASSASLYRLPRAPLEGTEGGGEGDGQDVDVDMTFVESVFSLLFGDGPPGPSQSRQWQTLAKLIHERGGIVLPEEIALWLRGVDPNGLDRSMFPVCARFGGQPVRCIDGETRRDCGYIYDFAGMRDKGRHSTLLSSTALREDVEEGGKGEMEARALLAPEGGGKGGQAVVEMTRVDMTTDAAEAGIQETLSEDEDDGCSRSTGSSSSSWWDGEGYLEEGRYVFSRAPLHLLQCAGALGFINLVGAVWVSNQWILFPEPGSTALYAVGRILLWYAVLYVSLPLIRLATIAVWNRGISQRNQVRKALWKAWKAAGEDSSSSVYLKMQYAHRVRMELGIGLGGLGRPGLGRRDESIPVATQILSPPPMPSPYSSAVASPQSAALV 669
MTVDLSRGGRKTTSSSAAGGAAATDSHRLDQDGVPNEGVLQAIEYLGHTCSVHDVVARCGLPQDLVEAEMAAFLRVSNGFFEVLASPSANDDVFEVKNSDDQQANAQHLQRRDVEYVANVFSTDNVRYVYPSGLRSLLRRRFVLMRLREAGVRVLHVAFKVVRISFGILLMLSLLIVVIVIVVVVARSGGGEHRHGQLDMLRVMHRPRRHYLGGGGMGGGDWRDMYYMWWWWNYNPFLFGRDPQMQAQRWREQQTRRRRVLGAMDEEGGRAREAGEGGDPSPGSRRRTASSASLYRLPRAPLEGTEGGGEGDGQDVDVDMTFVESVFSLLFGDGPPGPSQSRQWQTLAKLIHERGGIVLPEEIALWLRGVDPNGLDRSMFPVCARFGGQPVRCIDGETRRDCGYIYDFAGMRDKGRHSTLLSSTALREDVEEGGKGEMEARALLAPEGGGKGGQAVVEMTRVDMTTDAAEAGIQETLSEDEDDGCSRSTGSSSSSWWDGEGYLEEGRYVFSRAPLHLLQCAGALGFINLVGAVWVSNQWILFPEPGSTALYAVGRILLWYAVLYVSLPLIRLATIAVWNRGISQRNQVRKALWKAWKAAGEDSSSSVYLKMQYAHRVRMELGIGLGGLGRPGLGRRDESIPVATQILSPPPMPSPYSSAVASPQSAALV
Sbjct: 1 MTVDLSRGGRKTTSSSAAGGAAATDSHRLDQDGVPNEGVLQAIEYLGHTCSVHDVVARCGLPQDLVEAEMAAFLRVSNGFFEVLASPSANDDVFEVKNSDDQQANAQHLQRRDVEYVANVFSTDNVRYVYPSGLRSLLRRRFVLMRLREAGVRVLHVAFKVVRISFGILLMLSLLIVVIVIVVVVARSGGGEHRHGQLDMLRVMHRPRRHYLGGGGMGGGDWRDMYYMWWWWNYNPFLFGRDPQMQAQRWREQQTRRRRVLGAMDEEGGRAREAGEGGDPSPGSRRRTASSASLYRLPRAPLEGTEGGGEGDGQDVDVDMTFVESVFSLLFGDGPPGPSQSRQWQTLAKLIHERGGIVLPEEIALWLRGVDPNGLDRSMFPVCARFGGQPVRCIDGETRRDCGYIYDFAGMRDKGRHSTLLSSTALREDVEEGGKGEMEARALLAPEGGGKGGQAVVEMTRVDMTTDAAEAGIQETLSEDEDDGCSRSTGSSSSSWWDGEGYLEEGRYVFSRAPLHLLQCAGALGFINLVGAVWVSNQWILFPEPGSTALYAVGRILLWYAVLYVSLPLIRLATIAVWNRGISQRNQVRKALWKAWKAAGEDSSSSVYLKMQYAHRVRMELGIGLGGLGRPGLGRRDESIPVATQILSPPPMPSPYSSAVASPQSAALV 669
BLAST of EWM28772.1 vs. NCBI_GenBank
Match: gi|501265194|ref|WP_012308212.1| (MULTISPECIES: hypothetical protein [Synechococcus] >gi|169886880|gb|ACB00594.1| conserved hypothetical protein [Synechococcus sp. PCC 7002] >gi|1184395154|emb|SMH50622.1| hypothetical protein SAMN06272755_2240 [Synechococcus sp. OG1] >gi|1191923860|emb|SMQ81874.1| hypothetical protein SAMN06272774_1516 [Synechococcus sp. 7002]) HSP 1 Score: 97.4413 bits (241), Expect = 7.380e-18 Identity = 89/356 (25.00%), Postives = 142/356 (39.89%), Query Frame = 0
Query: 39 VLQAIEYLGHTCSVHDVVARCGLPQDLVEAEMAAFLRVSNGFFEVLASPSANDDVFEVKNSDDQQANAQHLQRRDVEYVANVFSTDNVRYVYPSGLRSLLRRRFVLMRLREAGVRVLHVAFKVVRISFGILLMLSLLIVVIVIVVVVARSGGGEHRHGQLDMLRVMHRPRRHYLGGGGMGGGDWRDMYYMWW-WWNYNPFLFGRDPQMQAQRWREQQTRRRRVLGAMDEEGGRAREAGEGGDPSPGSRRRTASSASLYRLPRAPLEGTEGGGEGDGQDVDVDMTFVESVFSLLFGDGPPGPS-QSRQWQTLAKLIHERGGIVLPEEIALWLRGVDPNGLDRS--MFPVCARFGGQP 390
+++A+E L + +V +V + GL ++ + NG + + A HLQ V T +V + +P R++LR ++ +RL+E + V F ++RISFGI L+LS+L++ I I+ +V + ++ + + P W WW NPF RV P+ RR SSA+L + TE GG M F+E+VFS LFGDG P P+ + R+WQT+ ++I G V+ E++A + + P + M PV ARF G P
Sbjct: 7 LMRAVETLQYRATVGEVATQAGLELNVAQ----------NGLYNLAADAGG------------------HLQ---------VAETGDVVFEFPKNFRTILRNKYFKIRLQEWLDKTWRVVFFLIRISFGIALILSILLMTIAILALVTAASSQDNNNSSRRRSSSFNLP---------------------WLVWWGPNPF---------------------RVF-----------------SPNYYGPRRYGSSATL----KNTTSNTEKGG----------MNFLEAVFSFLFGDGDPNPNLEERRWQTIGQVIQNNDGAVIAEQLAPYFDELSPTEKNEESYMLPVLARFNGYP 252
BLAST of EWM28772.1 vs. NCBI_GenBank
Match: gi|1047321178|ref|WP_065717094.1| (hypothetical protein [Synechococcus sp. PCC 8807] >gi|1046573100|gb|ANV91530.1| hypothetical protein AWQ24_13315 [Synechococcus sp. PCC 8807]) HSP 1 Score: 94.3597 bits (233), Expect = 7.704e-17 Identity = 91/384 (23.70%), Postives = 150/384 (39.06%), Query Frame = 0
Query: 39 VLQAIEYLGHTCSVHDVVARCGLPQDLVEAEMAAFLRVSNGFFEVLASPSANDDVFEVKNSDDQQANAQHLQRRDVEYVANVFSTDNVRYVYPSGLRSLLRRRFVLMRLREAGVRVLHVAFKVVRISFGILLMLSLLIVVIVIVVVVARSGGGEHRHGQLDMLRVMHRPRRHYLGGGGMGGGDWRDMYYMWW--WWNYNPFLFGRDPQMQAQRWREQQTRRRRVLGAMDEEGGRAREAGEGGDPSPGSRRRTASSASLYRLPRAPLEGTEGGGEGDGQDVDVDMTFVESVFSLLFGDGPPGPS-QSRQWQTLAKLIHERGGIVLPEEIALWLRGVDPN--GLDRSMFPVCARFGGQPVRCIDGETRRDCGYIYDFAGMRDKGRH 417
+++A+E L + +V +V + GL ++ + NG + + A HLQ V T +V + +P R++LR ++ +RL+E + V F ++RISFGI L+LS+L++ I I+ +V + ++ + + P W WW NPF RV P+ RR S+ SL + TE GG M F+E+VFS LFGDG P P+ + R+WQT+ ++I G V+ E+++ + + P + M PV ARF G P G+ +Y F ++ K +
Sbjct: 7 LMRAVETLQYRATVGEVATQAGLELNVAQ----------NGLYNLAADAGG------------------HLQ---------VAETGDVVFEFPKNFRTILRNKYFKIRLQEWLDKTWRVVFFLIRISFGIALILSILLMTIAILALVTAASSQDNNNSSRRRSSSFNLP----------------------WLVWWGPNPF---------------------RVF-----------------SPNYYGPRRYGSATSL----KNTTSNTEKGG----------MNFLEAVFSFLFGDGDPNPNLEERRWQTIGQVIQNNDGAVIAEQLSPYFDKLSPTEQTEESYMLPVLARFNGYPEVSPTGDL------VYYFPELQVKAQE 273
BLAST of EWM28772.1 vs. NCBI_GenBank
Match: gi|504945481|ref|WP_015132583.1| (hypothetical protein [Leptolyngbya sp. PCC 7376] >gi|427354074|gb|AFY36797.1| hypothetical protein Lepto7376_0358 [Leptolyngbya sp. PCC 7376]) HSP 1 Score: 88.9669 bits (219), Expect = 3.923e-15 Identity = 90/381 (23.62%), Postives = 152/381 (39.90%), Query Frame = 0
Query: 39 VLQAIEYLGHTCSVHDVVARCGLPQDLVEAEMAAFLRVSNGFFEVLASPSANDDVFEVKNSDDQQANAQHLQRRDVEYVANVFSTDNVRYVYPSGLRSLLRRRFVLMRLREAGVRVLHVAFKVVRISFGILLMLSLLIVVI-VIVVVVARSGGGEHRHGQLDMLRVMHRPRRHYLGGGGMGGGDWRDMYYMWWWWNYNPFLFGRDPQMQAQRWREQQTRRRRVLGAMDEEGGRAREAGEGGDPSPGSRRRTASSASLYRLPRAPLEGTEGGGEGDGQDVDVDMTFVESVFSLLFGDGPPGPS-QSRQWQTLAKLIHERGGIVLPEEIALWLRGVDPNGLDRSMFPVCARFGGQPVRCIDGETRRDCGYIYDFAGMRDKGRH 417
+++A+E L + +V +V ++ GL L + ++A+ + G +LQ V T ++ Y +PS RS+L + +RL+ +V F ++RISFG+ L+ S+ I+ I ++ ++ A + ++ + R R GGG+ + +WW P LF R+ +PG RR + R+ A G D +M F+ESVFS LFGDG P P+ + R+WQ++ ++I G V+ E+IA + +D + M V ARF G P +GE IY F ++ K +
Sbjct: 7 LMKAVETLQYRATVGEVASQAGLSVQLAQNQLASLASEAGG----------------------------NLQ---------VAETGDIIYEFPSNFRSILSSKSFKLRLKAPLDKVWQAVFYIIRISFGVALVASIAIMTIAILALIFAANSRDDNNNS---------RSR-----GGGIP-----TTWLIWW----GPDLF-------------------RMF-------------------TPGYYRRGYGRSPQLRVQTA------------GNSQDSEMNFLESVFSFLFGDGDPNPNLEDRRWQSIGQVIQNNDGAVIAEQIAPYFDDLDSIAEENHMMAVMARFNGYPEVSPEGEL------IYYFPELQVKAKE 271
BLAST of EWM28772.1 vs. NCBI_GenBank
Match: gi|550281711|ref|WP_022608079.1| (hypothetical protein [Rubidibacter lacunae] >gi|549081380|gb|ERN40674.1| hypothetical protein KR51_00026580 [Rubidibacter lacunae KORDI 51-2]) HSP 1 Score: 87.4261 bits (215), Expect = 1.328e-14 Identity = 92/359 (25.63%), Postives = 149/359 (41.50%), Query Frame = 0
Query: 35 PNEGVLQAIEYLGHTCSVHDVVARCGLPQDLVEAEMAAFLRVSNGFFEVLASPSANDDVFEVKNSDDQQANAQHLQRRDVEYVANVFSTDNVRYVYPSGLRSLLRRRFVLMRLREAGVRVLHVAFKVVRISFGILLMLSLLIVVIVIVVVVARSGGGEHRHGQLDMLRVMHRPRRHYLGGGGMGGGDWRDMYYM--WWWWNYNPFLFGRDPQMQAQRWREQQTRRRRVLGAMDEEGGRAREAGEGGDPSPGSRRRTASSASLYRLPRAPLEGTEGGGEGDGQDVDVDMTFVESVFSLLFGDGPPGPS-QSRQWQTLAKLIHERGGIVLPEEIALWLRGVDPNGLDRSMFPVCARFGGQP 390
PN V++AI L + +V D+ + GL +L EA G V A HLQ V + ++ Y +P R+LLR ++ +RL+++ RV + F +VRISFGILL+ +++++V+ I V+ + R G +R + G G+ +++M + W+ +PF F + G AR RRR S+A P A D D+ F+E++FS LFGDG P P + R+WQ + I ++GG + E +A ++ VD + + + PV RF G+P
Sbjct: 3 PNPAVVKAIAQLNYRATVGDLASEAGL--ELNEAR--------QGLLAVAADAGG------------------HLQ---------VAESGDIAYEFPQNFRTLLRNKYWRLRLQDSWQRVWGILFYLVRISFGILLIATIVLMVVAIAVIAIAASSQRSRDG--------NRSSSNESSGVGIP------IFFMPRFIWFGPDPFWF------------------------FYYDYGAAR------------RRRDLSAAQAESSPSA--------------DYTSDLNFLEAIFSFLFGDGNPNPDREERRWQAIGSAIRQQGGAIAAEHVAPYVDEVDED--EDFLLPVLVRFDGRP 258
BLAST of EWM28772.1 vs. NCBI_GenBank
Match: gi|1172437995|ref|WP_080813789.1| (hypothetical protein [Halomicronema hongdechloris] >gi|1209462743|gb|ASC71082.1| uncharacterized protein XM38_020320 [Halomicronema hongdechloris C2206]) HSP 1 Score: 72.4034 bits (176), Expect = 1.032e-9 Identity = 52/151 (34.44%), Postives = 76/151 (50.33%), Query Frame = 0
Query: 35 PNEGVLQAIEYLGHTCSVHDVVARCGLPQDLVEAEMAAFLRVSNGFFEVLASPSANDDVFEVKNSDDQQANAQHLQRRDVEYVANVFSTDNVRYVYPSGLRSLLRRRFVLMRLREAGVRVLHVAFKVVRISFGILLMLSLLIVVIVIVVVV 185
PN V+QA+E L + +V DV A+ GL DL +A LAS D QA HLQ V + + Y +P R++LR +F +RLRE RV HV F ++RISFGILL++S++++ + I ++V
Sbjct: 3 PNPTVMQAVESLDYRVTVGDVAAQAGL--DLNQARQGLL---------ALAS--------------DTQA---HLQ---------VSESGEIAYEFPRNFRAVLRNKFWRLRLRETWERVWHVLFYLIRISFGILLIVSIVLIFVTIAILV 116
BLAST of EWM28772.1 vs. NCBI_GenBank
Match: gi|504996226|ref|WP_015183328.1| (hypothetical protein [Microcoleus sp. PCC 7113] >gi|428253227|gb|AFZ19186.1| hypothetical protein Mic7113_3457 [Microcoleus sp. PCC 7113]) HSP 1 Score: 72.4034 bits (176), Expect = 1.039e-9 Identity = 57/217 (26.27%), Postives = 95/217 (43.78%), Query Frame = 0
Query: 39 VLQAIEYLGHTCSVHDVVARCGLPQDLVEAEMAAFLRVSNGFFEVLASPSANDDVFEVKNSDDQQANAQHLQRRDVEYVANVFSTDNVRYVYPSGLRSLLRRRFVLMRLREAGVRVLHVAFKVVRISFGILLMLSLLIVVIVIVVVVAR---------SGGGEHRHGQLDMLRVMHRPRRHYLGGGGMGGGD---WRDMYYMWWWWNYNPFLFGRDP 243
+++A+E LG+ +V DV A+ GL +L E + A + G HLQ V + + Y++P R++LR +F+ +RL+E ++ V F ++RISFG++L+LS++++ + I V++ SGGG+ RH GGG + W DM WW ++P G DP
Sbjct: 7 IMKAVEQLGYRVTVGDVAAQVGLNINLAEQGLLALASEAGG----------------------------HLQ---------VAESGEIAYLFPKHFRAILRNKFLRVRLQEWWQKIWRVLFYLIRISFGVILILSIVLIFVAIAVILIAISASNSDNDSGGGDSRHSS---------------GGGIFFMPNFWLWSDM-----WWFFSP---GYDP 163
BLAST of EWM28772.1 vs. NCBI_GenBank
Match: gi|1049322140|gb|OCR00310.1| (hypothetical protein BCD67_25250 [Oscillatoriales cyanobacterium USR001]) HSP 1 Score: 71.2478 bits (173), Expect = 2.058e-9 Identity = 44/152 (28.95%), Postives = 75/152 (49.34%), Query Frame = 0
Query: 35 PNEGVLQAIEYLGHTCSVHDVVARCGLPQDLVEAEMAAFLRVSNGFFEVLASPSANDDVFEVKNSDDQQANAQHLQRRDVEYVANVFSTDNVRYVYPSGLRSLLRRRFVLMRLREAGVRVLHVAFKVVRISFGILLMLSLLIVVIVIVVVVA 186
PN ++QA+E LG+ +V DVVA+ GL + + E+ A LAS D N Q V + + Y +P R +LR +F+ ++L+E ++ V F ++RISFGI+L+ S+L++++ I V++
Sbjct: 3 PNPNIMQAVEQLGYRVTVGDVVAKAGLDVNFAQRELLA-----------LAS--------------DVGGNLQ------------VAESGEIAYSFPQNFRDILRNKFLWLQLQEWWAKIWRVLFYLIRISFGIVLLASILLIIVSITVILT 117
BLAST of EWM28772.1 vs. NCBI_GenBank
Match: gi|1132225179|ref|WP_075893497.1| (hypothetical protein [Limnothrix rosea] >gi|1115250625|gb|OKH15149.1| hypothetical protein NIES208_13225 [Limnothrix rosea IAM M-220]) HSP 1 Score: 70.8626 bits (172), Expect = 2.612e-9 Identity = 38/100 (38.00%), Postives = 54/100 (54.00%), Query Frame = 0
Query: 319 DMTFVESVFSLLFGDGPPGPS-QSRQWQTLAKLIHERGGIVLPEEIALWLRGVDPNGLDRSMFPVCARFGGQPVRCIDGETRRDCGYIYDFAGMRDKGRH 417
DM F+ESVFS LFGDG P P+ + R+WQ + ++I G V+ E+IA + +D + M V ARF G P +GE IY F ++ K +
Sbjct: 179 DMNFLESVFSFLFGDGNPNPNLEERRWQNIGQIIQNNDGAVVAEQIAPYFDDLDAIAEENHMMAVMARFNGYPEVSPEGEL------IYYFPELQVKAQE 272
BLAST of EWM28772.1 vs. NCBI_GenBank
Match: gi|516254732|ref|WP_017658695.1| (hypothetical protein [Geitlerinema sp. PCC 7105]) HSP 1 Score: 70.0922 bits (170), Expect = 4.952e-9 Identity = 79/368 (21.47%), Postives = 134/368 (36.41%), Query Frame = 0
Query: 35 PNEGVLQAIEYLGHTCSVHDVVARCGLPQDLVEAEMAAFLRVSNGFFEVLASPSANDDVFEVKNSDDQQANAQHLQRRDVEYVANVFSTDNVRYVYPSGLRSLLRRRFVLMRLREAGVRVLHVAFKVVRISFGILLMLSLLIVVIVIVVVVARSGGGEHRHGQLDMLRVMHRPRRHYLGGGGMGGGDWRDMYYMW-WWWNYNPFLFGRDPQMQAQRWREQQTRRRRVLGAMDEEGGRAREAGEGGDPSPGSRRRTASSASLYRLPRAPLEGTEGGGEGDGQDVDVDMTFVESVFSLLFGDGPPGPSQSRQWQTLAKLIHERGGIVLPEEIALWLRGVDPNGLDRS----MFPVCARFGGQPVRCIDGE 397
PN ++ A+E L + +V DV ++ GL + + + A G HLQ V T ++ Y +P LR++LR +F +RL+ ++ V F ++RISFG LL+LS++++ + I V+ + G +L + +++W W+W Y+P +R Q+T +R P R S + LE GDG P + R+WQ +A ++ G+V+ E+IA +L + + DR M PV A+F G P +G+
Sbjct: 3 PNPQIIDAVEQLNYRATVGDVASQAGLEVNFAQQGLLALASDVGG----------------------------HLQ---------VAETGDIVYQFPKNLRAVLRNKFFRLRLQAWWEKIWRVLFYLIRISFGTLLILSIVLIFVTIAVLAFAASSSRDGDGGGGGSSDRGGGGGGWL---------FVPRFWIWDWFWFYDP-----------AAYRSQRTTQR---------------------TKPSKRSEKDSDLNF-------LEAVFSFLFGDG--------------------NPNADLEERRWQDIATVVRNHRGVVVAEQIAPYLDDLG-SQFDRETEDYMLPVLAKFDGYPEVSPEGQ 264 The following BLAST results are available for this feature:
BLAST of EWM28772.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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