EWM28664.1, cds1864 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28664.1 vs. NCBI_GenBank
Match: gi|585111087|gb|EWM28664.1| (nuclear autoantigenic sperm protein [Nannochloropsis gaditana]) HSP 1 Score: 1053.51 bits (2723), Expect = 0.000e+0 Identity = 523/523 (100.00%), Postives = 523/523 (100.00%), Query Frame = 0
Query: 1 MASSSTTAHAASSAVGDKKDTPQERLAAMLEDPRYKQGVALCKRGQFDEALEFLGSCVALAASEDDVSLAAAPVYFAYGDALLSKAEESVDLFGAAMTAAKEKVGEEEEGEEEAEEECEGHGSTSDAAAASSSNEANSSNNGVAMAGGESCTKAPATASSKAIGETAYEEGDTGGEITKVGIPEDVQDDLEVAWENLEASRVIYHKHEDMVDPMKLGEVYLRLGDLQKANGNFTQAVDDYLRSLEIYAKVCDEDSRVIADLHYQLAMMYIYASVEEEHAVTFKSKALEHYIQCARVFEILVEKARKAAATAGKVGDGEEDGSSFPKEGRKEGEDAVKSPPPPPKSTPAEDLKEFEEILAELRETIEATRQELSAAGSVAKAPGPVTTIGFGQPLASSLGPPAAHGEAEGISRNGSGGGAAHLKGQSEKMGPRTLDGGQASVATTAAVNVMAVKKKTKSLIPTASSSPREPSAGLSAAAAGKMEAKKDDLEPQSEEKMSPKKRLVTEQTEGPAELPISKEARFE 523
MASSSTTAHAASSAVGDKKDTPQERLAAMLEDPRYKQGVALCKRGQFDEALEFLGSCVALAASEDDVSLAAAPVYFAYGDALLSKAEESVDLFGAAMTAAKEKVGEEEEGEEEAEEECEGHGSTSDAAAASSSNEANSSNNGVAMAGGESCTKAPATASSKAIGETAYEEGDTGGEITKVGIPEDVQDDLEVAWENLEASRVIYHKHEDMVDPMKLGEVYLRLGDLQKANGNFTQAVDDYLRSLEIYAKVCDEDSRVIADLHYQLAMMYIYASVEEEHAVTFKSKALEHYIQCARVFEILVEKARKAAATAGKVGDGEEDGSSFPKEGRKEGEDAVKSPPPPPKSTPAEDLKEFEEILAELRETIEATRQELSAAGSVAKAPGPVTTIGFGQPLASSLGPPAAHGEAEGISRNGSGGGAAHLKGQSEKMGPRTLDGGQASVATTAAVNVMAVKKKTKSLIPTASSSPREPSAGLSAAAAGKMEAKKDDLEPQSEEKMSPKKRLVTEQTEGPAELPISKEARFE
Sbjct: 1 MASSSTTAHAASSAVGDKKDTPQERLAAMLEDPRYKQGVALCKRGQFDEALEFLGSCVALAASEDDVSLAAAPVYFAYGDALLSKAEESVDLFGAAMTAAKEKVGEEEEGEEEAEEECEGHGSTSDAAAASSSNEANSSNNGVAMAGGESCTKAPATASSKAIGETAYEEGDTGGEITKVGIPEDVQDDLEVAWENLEASRVIYHKHEDMVDPMKLGEVYLRLGDLQKANGNFTQAVDDYLRSLEIYAKVCDEDSRVIADLHYQLAMMYIYASVEEEHAVTFKSKALEHYIQCARVFEILVEKARKAAATAGKVGDGEEDGSSFPKEGRKEGEDAVKSPPPPPKSTPAEDLKEFEEILAELRETIEATRQELSAAGSVAKAPGPVTTIGFGQPLASSLGPPAAHGEAEGISRNGSGGGAAHLKGQSEKMGPRTLDGGQASVATTAAVNVMAVKKKTKSLIPTASSSPREPSAGLSAAAAGKMEAKKDDLEPQSEEKMSPKKRLVTEQTEGPAELPISKEARFE 523
BLAST of EWM28664.1 vs. NCBI_GenBank
Match: gi|553192873|ref|XP_005855661.1| (nuclear autoantigenic sperm protein, partial [Nannochloropsis gaditana CCMP526] >gi|422293398|gb|EKU20698.1| nuclear autoantigenic sperm protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 759.985 bits (1961), Expect = 0.000e+0 Identity = 374/378 (98.94%), Postives = 376/378 (99.47%), Query Frame = 0
Query: 146 AGGESCTKAPATASSKAIGETAYEEGDTGGEITKVGIPEDVQDDLEVAWENLEASRVIYHKHEDMVDPMKLGEVYLRLGDLQKANGNFTQAVDDYLRSLEIYAKVCDEDSRVIADLHYQLAMMYIYASVEEEHAVTFKSKALEHYIQCARVFEILVEKARKAAATAGKVGDGEEDGSSFPKEGRKEGEDAVKSPPPPPKSTPAEDLKEFEEILAELRETIEATRQELSAAGSVAKAPGPVTTIGFGQPLASSLGPPAAHGEAEGISRNGSGGGAAHLKGQSEKMGPRTLDGGQASVATTAAVNVMAVKKKTKSLIPTASSSPREPSAGLSAAAAGKMEAKKDDLEPQSEEKMSPKKRLVTEQTEGPAELPISKEARFE 523
AGGESCTKAPATASSKAIGET YEEGDTGGEITKVGIPEDVQDDLEVAWENLEASRVIYHKHEDMVDPMKLGEVYLRLGDLQKANGNFTQAVDDYLRSLEIYAKVCDEDSRVIADLHYQLAMMYIYASVEEEHAVTFKSKALEHYIQCARVFEILVEKARKAAATAGKVGDGEEDGSSFP+E RKEGEDAVKSPPPPPKSTPAEDLKEFEEILAELRETIEATRQELSAAGSVAKAPGPVTTIGFGQPLASSLGPPAAHGEA+GISRNGSGGGAAHLKGQSEKMGPRTLDGGQASVATTAAVNVMAVKKKTKSLIPTASSSPREPSAGLSAAAAGKMEAKKDDLEPQSEEKMSPKKRLVTEQTEGPAELPISKEARFE
Sbjct: 1 AGGESCTKAPATASSKAIGETVYEEGDTGGEITKVGIPEDVQDDLEVAWENLEASRVIYHKHEDMVDPMKLGEVYLRLGDLQKANGNFTQAVDDYLRSLEIYAKVCDEDSRVIADLHYQLAMMYIYASVEEEHAVTFKSKALEHYIQCARVFEILVEKARKAAATAGKVGDGEEDGSSFPEERRKEGEDAVKSPPPPPKSTPAEDLKEFEEILAELRETIEATRQELSAAGSVAKAPGPVTTIGFGQPLASSLGPPAAHGEAKGISRNGSGGGAAHLKGQSEKMGPRTLDGGQASVATTAAVNVMAVKKKTKSLIPTASSSPREPSAGLSAAAAGKMEAKKDDLEPQSEEKMSPKKRLVTEQTEGPAELPISKEARFE 378
BLAST of EWM28664.1 vs. NCBI_GenBank
Match: gi|575475108|ref|XP_006676848.1| (hypothetical protein BATDEDRAFT_36621 [Batrachochytrium dendrobatidis JAM81] >gi|328772735|gb|EGF82773.1| hypothetical protein BATDEDRAFT_36621 [Batrachochytrium dendrobatidis JAM81]) HSP 1 Score: 90.8929 bits (224), Expect = 4.120e-16 Identity = 85/293 (29.01%), Postives = 128/293 (43.69%), Query Frame = 0
Query: 71 AAPVYFAYGDALLSKAEESVDLFGAAMTAAKEKVGEEEEGEEEAEEECEGHGSTSDAAAASSS--NEANSSNNGVAMAGGESCTKAPATASSKAIGETAYEEGDTGGEITKVGIPEDVQDDLEVAWENLEASRVIYHKHEDMVDPMKLGEVYLRLGDLQKANGNFTQAVDDYLRSLEIYAKVCDEDSRVIADLHYQLAMMYIYASVEEEHAVTFKSKALEHYIQCARVFEILVEKARKAAATAGKVGDGEEDGSSFPKEGRKEGEDAVKSPPPPPKSTPAEDLKEFEEILAEL 361
+A + F YG ALL+ A + L G E VGE G S S++ A S+ + NG + A + E ++G G+I E+ +DLE+AWE + R+IY + E D KLGEVY+ LGD+ +GNF QA+ D+L +L I + D D R +A+ HY+LA+ Y+ E+ A+ Q V E + K A E+G +G+ K+ P P++ E +KE E +LAE+
Sbjct: 65 SAEILFHYGRALLANAVQKNSLLG-------ENVGEA------------GAASFSESVATGSTPGKAGHFVFNGDEENSEDDDECAEEQVERADVDENGGDDGVALGDI-----DEEDPEDLEIAWETFDLVRIIYTESEVPEDKKKLGEVYMALGDVSLESGNFEQAITDFLTALRIKEETLDSDDRELAEAHYKLALALEYSEQIED--------AIVQVTQTTTVLEKHLHKLTNRDAVT-------ENGDGADIKGK-------KAADPVPEAVSKE-IKEVESLLAEM 310
BLAST of EWM28664.1 vs. NCBI_GenBank
Match: gi|1149596950|gb|OON04912.1| (hypothetical protein BSLG_05082 [Batrachochytrium salamandrivorans]) HSP 1 Score: 91.2781 bits (225), Expect = 4.629e-16 Identity = 84/318 (26.42%), Postives = 132/318 (41.51%), Query Frame = 0
Query: 68 SLAAAPVYFAYGDALLSKAEESVDLFGAAM-----TAAKEKVGEEE-------------EGEEEAEEECEGHGSTSDAAA--ASSSNEANSSNNGVAMAGGESCTKAPATASSKAIGETAYEEGDTGGEITKVGIPEDVQDDLEVAWENLEASRVIYHKHEDMVDPMKLGEVYLRLGDLQKANGNFTQAVDDYLRSLEIYAKVCDEDSRVIADLHYQLAMMYIYASVEEEHAVTFKSKALEHYIQCARVFEILVEKARKAAATAGKVGDGEEDGSSFPKEGRKEGEDAVKSPPPPPKSTPAEDLKEFEEILAELRETI 365
SL +A F YG ALL+ + L G M +A + V +G++E + E +DA A A S+ N +GVA+A I E+ DDLE+AWE + R+IY + ++ + KLGEVY+ LGD+ +GNF QA+ D+L +L I + D R +A+ HY+LA+ Y+ E+ A+E Q V + + K+ +G +G + G+ +G P A+++KE E +LAE+ I
Sbjct: 101 SLESAETLFLYGRALLANVVQKNSLLGENMGESSAVSASDDVATSSTSLGKTGHFVFNGDGDDERVVDDEAQDGDNDAQAEEAEGSDRENEDEDGVALAD----------------------------------IDEEDPDDLEIAWETFDLVRIIYSESDEPANKQKLGEVYMALGDVSLESGNFEQAITDFLTALRIKEESLSGDDRELAEAHYKLALALEYSEQTED--------AIEQVTQTIDVLQKHL----------AKLCNGSANGDAASSTGKGKG------AAEPVSEAVAKEIKEVETLLAEMSAKI 360
BLAST of EWM28664.1 vs. NCBI_GenBank
Match: gi|551636570|ref|XP_005821109.1| (hypothetical protein GUITHDRAFT_119683 [Guillardia theta CCMP2712] >gi|428165126|gb|EKX34129.1| hypothetical protein GUITHDRAFT_119683 [Guillardia theta CCMP2712]) HSP 1 Score: 88.1965 bits (217), Expect = 3.016e-15 Identity = 110/449 (24.50%), Postives = 181/449 (40.31%), Query Frame = 0
Query: 18 KKDTPQERLAAMLEDPRYKQGVALCKRGQFDEALEFLGSCVA-LAASEDDVSLAAAPVYFAYGDALLSKAEES------VDLFGAAMTAAKEKVGEEEEGEEEAEEECEGHGSTSDAAAASSSNEANSSNNGVAMAGGESCTKAPATASSKAIGETAYEEGDTGGEITKVGIPEDVQDDLEVAWENLEASRVIYHKHEDMVDPMKLGEVYLRLGDLQKANGNFTQAVDDYLRSLEIYAKVCDEDSRVIADLHYQLAMMYIYASVEEEHAVTFKSKALEHYIQCARVFEILVEKARKAAATAGKVGDGEEDGSSFPKEGRKEGEDAVKSPPPPPKSTPAEDLKEFEEILAELRETIEATRQELSAAGSVAKAPGPVTTIGFGQPLASSLGPPAAHGEAEGISRNGSGGGAA-HLKGQSEKMGPRTLDGGQASVATTAAVNVMAVKKKTKS 458
+ D P++ ++LE + L ++ + EA++ L S + A D++L APVY YG ALL + E+ D+FGA++ +E C G AA E NS G G E + +G+ G + E ++D L++AWE L+ +R I+ KH+ D + L + Y LGD+ N F A D+ R L+I +VC D R+ +++Y L M + S + +A+E Y + + E+ + K K + G + +GSS R + E ++ E E I +LR+T+E+ ++ P AA G +G S++ GG A L GQ E+ + G A V + V V+ V K ++
Sbjct: 2 RMDQPEKPDNSLLE-----KAAGLLQQKKCSEAVDILSSLLQDFVAYYGDLALECAPVYLKYGTALLREVEDKEENAGGQDVFGASV----------------PKEVCTG--------AAKQDGEGNSLQEGAEGDGEEEEEGEDEAKGEEEGDAPETSKGEEGAQ-------EPLEDPLQLAWEVLDCARTIFEKHDG--DKLLLADTYSFLGDVNLRNEQFELAFSDFQRCLDIRKEVCLSDDRLFVEIYYNLGMCLMIQSTNN------RPQAMEFYRKAIDICELRI-KNMKTMSEGGSL-----EGSSVSSMTRSKLES---------------EINELEAIAEDLRQTVESEELQVE--------------------------PAAASG--QGSSKDMFGGDALKELSGQKEEQDAK----GFAKVESCEPVKVLGVFGKKRA 353
BLAST of EWM28664.1 vs. NCBI_GenBank
Match: gi|224010916|ref|XP_002294415.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220969910|gb|EED88249.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 87.4261 bits (215), Expect = 1.149e-14 Identity = 85/319 (26.65%), Postives = 129/319 (40.44%), Query Frame = 0
Query: 33 PRYKQGVALCKRGQFDEALEFLGSCV------------ALAASE------DDVSLAAAPVYFAYGDALLSKAEESVDLFGAAMTAAKEKVGEEEEGEEEAEEECEGHGSTSDAAAASSSNEANSSNNGVAMAGGESCTKAPATASSKAIGETAYEEGDTGGEITKVGIPEDVQDDLEVAWENLEASRVIYHKHEDMVDPMKLGEVYLRLGDLQKANGNFTQAVDDYLRSLEIYAKVCDEDSRVIADLHYQLAMMYI------------------------------YASVEEEHAVTFKSKALEHYIQCARVFEILVEK 303
P + GQF++ALE L + A A+SE DD+ A AP+Y+ YG LL EES M K ++ + ++ E H + + + + +A E+ + SK + E + EE D I VG E+V +D N E + Y K + + L +V+ RLGDLQKANGN T ++ DY+ SL I AK D +++AD H+ LA Y+ + + EE F+ K+ +HY+ C F L+ K
Sbjct: 45 PSHALAKQYLNTGQFNQALEVLEESLGEMHERLAELDGAAASSEGADKGGDDMHPALAPLYYLYGTTLLYLVEES-----DVMMNGKGEIQVNDNEDDNDESPPAAHSPQDEEEEEEEAPSDPAEDLQIAWENLETAR----SIMSKMVEEFSKEEED-AIVIKSVGKSEEVDEDNSNVNNNDEKKMMTYTKDQQTEILLDLAKVHSRLGDLQKANGNSTGSISDYIISLSIRAKCLDRYDKLVADAHFSLAQAYVEAPNSQARMEDEAAGIVAALGGGEESGSGGHRELTEEELAEFREKSCDHYLACGVSFAGLLAK 353
BLAST of EWM28664.1 vs. NCBI_GenBank
Match: gi|291190494|ref|NP_001167378.1| (HGV2 protein [Salmo salar] >gi|929240422|ref|XP_013996145.1| PREDICTED: HGV2 protein isoform X2 [Salmo salar] >gi|223672951|gb|ACN12657.1| HGV2 [Salmo salar]) HSP 1 Score: 83.9593 bits (206), Expect = 1.088e-13 Identity = 56/163 (34.36%), Postives = 83/163 (50.92%), Query Frame = 0
Query: 139 SNNGVAMAGGESCTKAPATASSKAIGETAYEEGDTGGEITKVGIPEDVQD----DLEVAWENLEASRVIYHKHEDMVDPMKLGEVYLRLGDLQKANGNFTQAVDDYLRSLEIYAKVCDEDSRVIADLHYQLAMMYIYASVEEEHAVTFKSKALEHYIQCARVF 297
+ NG GE KA SS E E+GD K IPED D +L++AWE LE ++VIY + E D + + +L LG++ +GN++QAVDD+ + L + K DSR++A+ HYQL + + S+A+EH+ ARV
Sbjct: 152 TTNGEEKVIGEKGDKAETKESSDNPEE---EDGDVEDGEEKEDIPEDSDDEEVGNLQLAWEMLEVAKVIYKRKEGKEDQLLAAQAHLNLGEVAAESGNYSQAVDDFQQCLSLQLKHLASDSRLLAETHYQLGLTLC--------SDCQYSQAIEHFNHSARVI 303
BLAST of EWM28664.1 vs. NCBI_GenBank
Match: gi|1158900652|ref|XP_020355061.1| (histone-binding protein N1/N2-like isoform X2 [Oncorhynchus kisutch]) HSP 1 Score: 83.5741 bits (205), Expect = 1.777e-13 Identity = 38/110 (34.55%), Postives = 63/110 (57.27%), Query Frame = 0
Query: 189 DLEVAWENLEASRVIYHKHEDMVDPMKLGEVYLRLGDLQKANGNFTQAVDDYLRSLEIYAKVCDEDSRVIADLHYQLAMMYIYASVEEEHAVTFKSKALEHYIQCARVFE 298
+L++AWE LE ++VIY + E+ D + + YL+LG++ +GN+ AV+D+ L + K SR++A+ HYQL M Y Y + S+A++HY +V E
Sbjct: 206 NLQLAWEMLEVAKVIYKRKENEADQLMAAQAYLKLGEVGAESGNYLAAVEDFQDCLALQLKHLPPHSRLLAETHYQLGMTYCY--------IGQYSQAIQHYSSSVKVIE 307
BLAST of EWM28664.1 vs. NCBI_GenBank
Match: gi|929240420|ref|XP_013996144.1| (PREDICTED: HGV2 protein isoform X1 [Salmo salar]) HSP 1 Score: 83.1889 bits (204), Expect = 2.272e-13 Identity = 78/248 (31.45%), Postives = 117/248 (47.18%), Query Frame = 0
Query: 139 SNNGVAMAGGESCTKAPATASSKAIGETAYEEGDTGGEITKVGIPEDVQD----DLEVAWENLEASRVIYHKHEDMVDPMKLGEVYLRLGDLQKANGNFTQAVDDYLRSLEIYAKVCDEDSRVIADLHYQLAMMYIYASVEEEHAVTFKSKALEHYIQCARVFEILVEKARKAAATAGKVGDGEEDGSSFPKEGRKEGEDAVKSPPPPPKSTPAEDLKEFEEILAELRETIEATRQELSAAGSVAKAP 382
+ NG GE KA SS E E+GD K IPED D +L++AWE LE ++VIY + E D + + +L LG++ +GN++QAVDD+ + L + K DSR++A+ HYQL + + S+A+EH+ ARV + + K ++ A +G E RKE E+ +K+ P + ED ++I A + EA QE A GS P
Sbjct: 186 TTNGEEKVIGEKGDKAETKESSDNPEE---EDGDVEDGEEKEDIPEDSDDEEVGNLQLAWEMLEVAKVIYKRKEGKEDQLLAAQAHLNLGEVAAESGNYSQAVDDFQQCLSLQLKHLASDSRLLAETHYQLGLTLC--------SDCQYSQAIEHFNHSARVIKSRLAKLQEVLEKA--------EGPEVAPEERKEMEE-LKALLPEIQE-KVEDATVGQKITAAV--AAEAVMQETLAGGSAFPTP 410
BLAST of EWM28664.1 vs. NCBI_GenBank
Match: gi|1158900650|ref|XP_020355060.1| (histone-binding protein N1/N2-like isoform X1 [Oncorhynchus kisutch]) HSP 1 Score: 83.1889 bits (204), Expect = 2.959e-13 Identity = 38/110 (34.55%), Postives = 63/110 (57.27%), Query Frame = 0
Query: 189 DLEVAWENLEASRVIYHKHEDMVDPMKLGEVYLRLGDLQKANGNFTQAVDDYLRSLEIYAKVCDEDSRVIADLHYQLAMMYIYASVEEEHAVTFKSKALEHYIQCARVFE 298
+L++AWE LE ++VIY + E+ D + + YL+LG++ +GN+ AV+D+ L + K SR++A+ HYQL M Y Y + S+A++HY +V E
Sbjct: 244 NLQLAWEMLEVAKVIYKRKENEADQLMAAQAYLKLGEVGAESGNYLAAVEDFQDCLALQLKHLPPHSRLLAETHYQLGMTYCY--------IGQYSQAIQHYSSSVKVIE 345 The following BLAST results are available for this feature:
BLAST of EWM28664.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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