EWM28807.1, cds1862 (CDS) Nannochloropsis gaditana

Overview
NameEWM28807.1
Unique Namecds1862
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:330903..331095 -
Alignment locationCM002458.1:329505..330646 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28807.1
Productriboflavin biosynthesis protein
Orig transcript idgnl|cribi|Naga_100002g158.4926.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:330903..331095 -
CM002458.1supercontigCM002458.1:329505..330646 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0055114oxidation-reduction process
GO:0009231riboflavin biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0003824catalytic activity
GO:0008835diaminohydroxyphosphoribosylaminopyrimidine deaminase activity
GO:0016787hydrolase activity
GO:0008270zinc ion binding
Vocabulary: INTERPRO
TermDefinition
IPR016193Cytidine_deaminase-like
IPR016192APOBEC/CMP_deaminase_Zn-bd
IPR024072DHFR-like_dom
IPR004794Eubact_RibD
IPR002125CMP_dCMP_Zn-bd
Homology
BLAST of EWM28807.1 vs. NCBI_GenBank
Match: gi|585111230|gb|EWM28807.1| (riboflavin biosynthesis protein [Nannochloropsis gaditana])

HSP 1 Score: 902.508 bits (2331), Expect = 0.000e+0
Identity = 444/444 (100.00%), Postives = 444/444 (100.00%), Query Frame = 0
Query:    1 MKQFLVDNRVPIFALVFLLPAATSFILSSHALCQRVGPIKYTERPFQGGRICHPLRPFLALAASTFTMEVDEESMAEIQEPSYSESDRKHMRRALHLAAQALGKTRPNPVVGCVILDQEGVVVGEGFHPKAGQPHAEVFALKEAGDRARGGTVYVTLEPCNHHGKTPPCVDALLEAGIKKVVAGMVDPFPLVGGKGLARLADNGVEVVVGCEEGKCQALNRPFVHRVQHGTPLGFLPLTYSRQDFVRPAPATVQLGDGGKALEMIDAIVVDFNVKGEGLQTVAALQTAGLLQDEVVRIVLANDLSALPVEWAKHKKASVRKVVLTTSIAGQEAAVEVLEGRGVEVIAMPTDPLAVGKYMHGLGLLSALWLLCPEGAKRAVKAGVVQDLWIHATLQEADDLDGVDDPDFLGRQFGRPMKMSVMSCDAVGTKACLLSLTIDDTATL 444
            MKQFLVDNRVPIFALVFLLPAATSFILSSHALCQRVGPIKYTERPFQGGRICHPLRPFLALAASTFTMEVDEESMAEIQEPSYSESDRKHMRRALHLAAQALGKTRPNPVVGCVILDQEGVVVGEGFHPKAGQPHAEVFALKEAGDRARGGTVYVTLEPCNHHGKTPPCVDALLEAGIKKVVAGMVDPFPLVGGKGLARLADNGVEVVVGCEEGKCQALNRPFVHRVQHGTPLGFLPLTYSRQDFVRPAPATVQLGDGGKALEMIDAIVVDFNVKGEGLQTVAALQTAGLLQDEVVRIVLANDLSALPVEWAKHKKASVRKVVLTTSIAGQEAAVEVLEGRGVEVIAMPTDPLAVGKYMHGLGLLSALWLLCPEGAKRAVKAGVVQDLWIHATLQEADDLDGVDDPDFLGRQFGRPMKMSVMSCDAVGTKACLLSLTIDDTATL
Sbjct:    1 MKQFLVDNRVPIFALVFLLPAATSFILSSHALCQRVGPIKYTERPFQGGRICHPLRPFLALAASTFTMEVDEESMAEIQEPSYSESDRKHMRRALHLAAQALGKTRPNPVVGCVILDQEGVVVGEGFHPKAGQPHAEVFALKEAGDRARGGTVYVTLEPCNHHGKTPPCVDALLEAGIKKVVAGMVDPFPLVGGKGLARLADNGVEVVVGCEEGKCQALNRPFVHRVQHGTPLGFLPLTYSRQDFVRPAPATVQLGDGGKALEMIDAIVVDFNVKGEGLQTVAALQTAGLLQDEVVRIVLANDLSALPVEWAKHKKASVRKVVLTTSIAGQEAAVEVLEGRGVEVIAMPTDPLAVGKYMHGLGLLSALWLLCPEGAKRAVKAGVVQDLWIHATLQEADDLDGVDDPDFLGRQFGRPMKMSVMSCDAVGTKACLLSLTIDDTATL 444          
BLAST of EWM28807.1 vs. NCBI_GenBank
Match: gi|808797791|ref|WP_046280111.1| (bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Limnoraphis robusta] >gi|807214250|gb|KKD36621.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Limnoraphis robusta CS-951])

HSP 1 Score: 230.335 bits (586), Expect = 4.345e-68
Identity = 135/321 (42.06%), Postives = 188/321 (58.57%), Query Frame = 0
Query:   75 MAEIQEPSY-SESDRKHMRRALHLAAQALGKTRPNPVVGCVILDQEGVVVGEGFHPKAGQPHAEVFALKEAGDRARGGTVYVTLEPCNHHGKTPPCVDALLEAGIKKVVAGMVDPFPLVGGKGLARLADNGVEVVVGCEEGKCQALNRPFVHRVQHGTPLGFLPLTYSRQDFVRPAPATVQLGDGGKALEMIDAIVVDFNVKGEGLQTV----AALQTAGLLQDEVVRIVLANDLSALPVEWAKHKKASVRKVVLTTSIAGQEAAVEVLEGRGVEVIAM-PTDPLAVGKYMHGLGLLSALWLLCPEGAKRAVKAGVVQDLW 389
            M  + +P   +E DR+ M R L LA +ALGKT PNP+VGCVI+ Q+ ++VGEGFHP AGQPHAEVFAL++AG+RA G TVYV LEPCNH+G+TPPC +AL++A + KVV GM+DP PLV G+G+ RL   G+EV+VG E+  CQ LN  FVHR+ H  PLG L    +    +              A + +  + V  +    G  TV      L T    +   +R+V++  L  LP+E       +   +VLTT  A  +   E L+ +GVEV+A+ P  P  V  +++    L+ LW      A +A+  GV+Q +W
Sbjct:    1 MIPLNDPERPAEFDRQMMLRCLELARRALGKTAPNPLVGCVIV-QDNMIVGEGFHPGAGQPHAEVFALRDAGERAVGATVYVNLEPCNHYGRTPPCTEALIQAKVAKVVVGMIDPNPLVAGQGIERLKQAGIEVIVGVEQDACQLLNEGFVHRILHHQPLGILKYAMTLDGKIATTTGHSAWITSPTARQQVHQLRVACDAVIVGGNTVRRDNPHLTTHHAGEPNPLRVVMSRKLD-LPLEANLWDITAANTLVLTTKDADPDCQ-EQLQKKGVEVVALSPLTPATVMNHLYDRQFLNVLWECGGTLAAQAIAEGVIQKIW 318          
BLAST of EWM28807.1 vs. NCBI_GenBank
Match: gi|501590381|ref|WP_012594570.1| (bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Cyanothece sp. PCC 8801] >gi|218166559|gb|ACK65296.1| riboflavin biosynthesis protein RibD [Cyanothece sp. PCC 8801])

HSP 1 Score: 228.024 bits (580), Expect = 2.536e-67
Identity = 129/310 (41.61%), Postives = 185/310 (59.68%), Query Frame = 0
Query:   87 DRKHMRRALHLAAQALGKTRPNPVVGCVILDQEGVVVGEGFHPKAGQPHAEVFALKEAGDRARGGTVYVTLEPCNHHGKTPPCVDALLEAGIKKVVAGMVDPFPLVGGKGLARLADNGVEVVVGCEEGKCQALNRPFVHRVQHGTPLGFLPLTYSRQDFVRPAPATVQLGDGGKALEMI-------DAIVVDFNVKGEGLQTVAALQTAGLLQDEVVRIVLANDLSALPVEWAKHKKASVRKVVLTTSIAGQEAAVEVLEGRGVEVIAMPT-DPLAVGKYMHGLGLLSALWLLCPEGAKRAVKAGVVQDL 388
            D++ M+R L LA QALG+T PNP+VG VI+ Q G +VGEGFHPKAG+PHAE+FAL++A +RA+G TVYV+LEPCNH+G+TPPC DAL+ AG+ KVV GMVDP PLV GKG+ +L ++G+EVVVG EE  C+ LN  F+HR+ H  PLG L    +    +           G  + +++       DA++V  N   +    +   + AG+     +R+V++  L  LP E    +      +V+T      +   + L  RGVEVI + +  P  V + ++  GL S LW      A +A+  GV+Q +
Sbjct:    7 DQQMMQRCLQLARQALGQTSPNPLVGSVIV-QNGEIVGEGFHPKAGEPHAEIFALRQAQERAKGATVYVSLEPCNHYGRTPPCTDALIAAGVSKVVVGMVDPNPLVSGKGVEKLQESGIEVVVGVEESACRQLNEAFIHRILHHQPLGILKYAMTLDGKIAATTGHSAWITGTASRQLVHQVRAACDAVIVGGNTLRKDNPNLTTHEVAGV---NPLRVVMSKTLD-LPSEANLWQTDIASTLVITERTRNSKLQAQ-LRNRGVEVIELASVTPSGVMQLLYERGLSSVLWECGGTLAAQAIADGVIQKI 310          
BLAST of EWM28807.1 vs. NCBI_GenBank
Match: gi|506263771|ref|WP_015783546.1| (bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Cyanothece sp. PCC 8802] >gi|256589296|gb|ACV00183.1| riboflavin biosynthesis protein RibD [Cyanothece sp. PCC 8802])

HSP 1 Score: 226.098 bits (575), Expect = 1.682e-66
Identity = 129/310 (41.61%), Postives = 184/310 (59.35%), Query Frame = 0
Query:   87 DRKHMRRALHLAAQALGKTRPNPVVGCVILDQEGVVVGEGFHPKAGQPHAEVFALKEAGDRARGGTVYVTLEPCNHHGKTPPCVDALLEAGIKKVVAGMVDPFPLVGGKGLARLADNGVEVVVGCEEGKCQALNRPFVHRVQHGTPLGFLPLTYSRQDFVRPAPATVQLGDGGKALEMI-------DAIVVDFNVKGEGLQTVAALQTAGLLQDEVVRIVLANDLSALPVEWAKHKKASVRKVVLTTSIAGQEAAVEVLEGRGVEVIAMPT-DPLAVGKYMHGLGLLSALWLLCPEGAKRAVKAGVVQDL 388
            D++ M+R L LA QALG+T PNP+VG VI+ Q G +VGEGFHPKAG+PHAE+FAL++A +RA+G TVYV+LEPCNH+G+TPPC DAL+ AG+ KVV GMVDP PLV GKG+ +L ++G+EVVVG EE  C+ LN  F+HR+ H  PLG L    +    +           G  + +++       DA++V  N   +    +   + AG+     +R+V++  L  LP E A   +  +   ++ T           L  RGVEVI + +  P  V + ++  GL S LW      A +A+  GV+Q +
Sbjct:    7 DQQMMQRCLQLARQALGQTSPNPLVGSVIV-QNGEIVGEGFHPKAGEPHAEIFALRQAQERAKGATVYVSLEPCNHYGRTPPCTDALIAAGVSKVVVGMVDPNPLVSGKGVEKLQESGIEVVVGVEESACRQLNEAFIHRILHHQPLGILKYAMTLDGKIAATTGHSAWITGTASRQLVHQVRAACDAVIVGGNTLRKDNPNLTTHEVAGV---NPLRVVMSKTLD-LPSE-ANLWQTDIAPTLVITERGRNSKLQAQLRDRGVEVIELASVTPSGVMQLLYERGLSSVLWECGGTLAAQAIADGVIQKI 310          
BLAST of EWM28807.1 vs. NCBI_GenBank
Match: gi|515855285|ref|WP_017285913.1| (bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase [Leptolyngbya boryana] >gi|932879235|dbj|BAS59287.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Leptolyngbya boryana IAM M-101] >gi|932885875|dbj|BAS65635.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Leptolyngbya boryana dg5] >gi|1210135266|dbj|BAY54371.1| riboflavin biosynthesis protein RibD [Leptolyngbya boryana NIES-2135])

HSP 1 Score: 223.016 bits (567), Expect = 2.413e-65
Identity = 129/314 (41.08%), Postives = 184/314 (58.60%), Query Frame = 0
Query:   85 ESDRKHMRRALHLAAQALGKTRPNPVVGCVILDQEGVVVGEGFHPKAGQPHAEVFALKEAGDRARGGTVYVTLEPCNHHGKTPPCVDALLEAGIKKVVAGMVDPFPLVGGKGLARLADNGVEVVVGCEEGKCQALNRPFVHRVQHGTPLGFLPLTYSRQDFVRPAPATVQLGDGGKALEMI-------DAIVVDFN-VKGEGLQTVAALQTAGLLQDEVVRIVLANDLSALPVEWAKHKKASVRKVVLTTSIAGQEAAVEVLEGRGVEVIAM-PTDPLAVGKYMHGLGLLSALWLLCPEGAKRAVKAGVVQDLW 389
            E DR  M+R L LA +A+G+T PNP+VGCVI+  +G +VGEGFHPK G+PHAEVFAL++AG R+R  T+YV LEPCNH G+TPPC  A+++AG+K+VV GMVDP P V GKG+A L + G+EV VG EE  CQ LN  FVHR+ +  P G L    +    +           G  +   +       DAIV+  N V+ +  +    L T GL + + +R+V++ +L  LP   A   K  + + V+ T +       E L  +GVEV+ +  T P AV + ++  G+ + LW      A +A++   VQ +W
Sbjct:    6 EFDRAMMQRCLELARRAIGRTAPNPMVGCVIV-ADGEIVGEGFHPKTGEPHAEVFALQQAGARSRNATLYVNLEPCNHFGRTPPCSQAVVKAGLKRVVVGMVDPNPQVAGKGIATLENAGIEVTVGVEEEACQTLNEAFVHRILNRRPFGILKYAMTLDGKIAATSGHSSWVTGQMSRRRVHQLRTQCDAIVIGGNTVRKDNPE----LTTHGLSEWQPLRVVMSRNLD-LPT-LANLWKTEIARTVVFTGLNANSDIQEKLSQQGVEVVNLETTTPAAVMENLYDRGMNTVLWECGGNLAAQAIRQSCVQKVW 312          
BLAST of EWM28807.1 vs. NCBI_GenBank
Match: gi|299115418|emb|CBN75583.1| (riboflavin biosynthesis protein [Ectocarpus siliculosus])

HSP 1 Score: 228.024 bits (580), Expect = 2.859e-65
Identity = 154/363 (42.42%), Postives = 192/363 (52.89%), Query Frame = 0
Query:   85 ESDRKHMRRALHLAAQALGKTRPNPVVGCVILDQEGVVVGEGFHPKAGQPHAEVFALKEAGDRARGGTVYVTLEPCNHHGKTPPCVDALLEAGIKKVVAGMVDPFPLVGGKGLARLADNGVEVVVGCEEGKCQALNRPFVHRVQHGTPLGFL------------PLTYSR------QDFVRPAPATVQLGDGGKALEMIDAIVVDFNVKGEGLQTVAALQTAG-LLQDEVVRIVL--ANDLSALPVEWAK------HKKASVRKVVLTTSIAGQEAAVEV-------LEGRGVEVIAM-----PTDPLA----------------------VGKYMHGLGLLSALWLLCPEGAKRAVKAGVVQ 386
            E D  HMRRAL LAA+ LG TRPNP VGCVILD+EG VVGEGFHP+AG+PHAEV+A+++AG+RARGGT YV+LEPCNH G+TPPC  ALLE G+ +VVAGMVDP P   G GL RLAD G++V VG E   C ALN  FVHRV H +  G L            P + SR      QD  R     V    GG+  E  DAIVV      EG   VA L+     L    +R+V+  A     L +E A        +++  R VV   + AGQ+    +       L  RG+ V+       PT P +                      V + +   G+LSA W + P  A   ++AG VQ
Sbjct:   68 EVDGAHMRRALELAAKGLGHTRPNPAVGCVILDKEGSVVGEGFHPRAGEPHAEVWAIRQAGERARGGTAYVSLEPCNHFGRTPPCTTALLECGVARVVAGMVDPDPRTAGSGLRRLADAGIDVSVGVEGAACHALNSAFVHRVSHKSCYGVLHCCLDGACSRSIPQSGSRAGVGGLQDTARENDLAVP--PGGRNFEEYDAIVV------EGRSGVAKLEACNSALPPTALRVVIVGAGSDEGLEIELAGVLESRLLEESPERTVVFMPATAGQDGDGSLTGSVRASLMSRGIAVVDFRTPDTPTPPASSLDEERPETATAAATMAAAAGAVSRELFRRGMLSAAWEVGPAMAAVVLRAGHVQ 422          
BLAST of EWM28807.1 vs. NCBI_GenBank
Match: gi|1121220266|ref|WP_073547706.1| (riboflavin biosynthesis protein RibD [Chroogloeocystis siderophila] >gi|1115265576|gb|OKH29223.1| riboflavin biosynthesis protein RibD [Chroogloeocystis siderophila 5.2 s.c.1])

HSP 1 Score: 222.631 bits (566), Expect = 6.813e-65
Identity = 131/318 (41.19%), Postives = 177/318 (55.66%), Query Frame = 0
Query:   79 QEPSYSESDRKHMRRALHLAAQALGKTRPNPVVGCVILDQEGVVVGEGFHPKAGQPHAEVFALKEAGDRARGGTVYVTLEPCNHHGKTPPCVDALLEAGIKKVVAGMVDPFPLVGGKGLARLADNGVEVVVGCEEGKCQALNRPFVHRVQHGTPLGFLPLTYSRQDFVRPAPATVQLGDGGKALEMI-------DAIVVDFNVKGEGLQTVAALQTAGLLQDEVVRIVLANDLSALPVEWAKHKKASVRKVVLTTSIAGQEAAVEVLEGRGVEVIAMPT-DPLAVGKYMHGLGLLSALWLLCPEGAKRAVKAGVVQDL 388
            +E   ++ DR  M+R L LA +ALG+T PNP+VG VI+ Q G +VGEGFHP AGQPHAEVFAL+ AGDRARG TVYV LEPCNH+G+TPPC +AL+ AG+ KVV GMVDP PLV G+G+ARL   G++VVVG EE  C+ LN  FVHR+ H  P G L    +    +  +           A  ++       DA++V  N        + + Q         +R+V++  L  LP E    + A    +VL T I       + L  + VEV+ +P+  P      ++  G  + LW      A RA+  G VQ +
Sbjct:    9 EETEVTDFDRAMMQRCLQLARRALGRTAPNPLVGSVIV-QAGEIVGEGFHPGAGQPHAEVFALRAAGDRARGATVYVNLEPCNHYGRTPPCSEALIAAGVAKVVVGMVDPNPLVAGRGIARLRSAGIKVVVGVEEDNCRQLNEGFVHRILHQRPFGILKYAMTLDGKIATSSGHSAWVSNQSARNLVHQLRAACDAVIVGGNTVRNDNPRLTSRQAEA---HNPLRVVMSRTLD-LPTEAYLWQTAEFPTLVL-TEINANPQFQQFLRQKNVEVVELPSLTPTQAMANLYARGFSAVLWECGGRLAARAIAEGSVQKI 320          
BLAST of EWM28807.1 vs. NCBI_GenBank
Match: gi|1111735524|gb|OJJ21982.1| (riboflavin biosynthesis protein RibD [Roseofilum reptotaenium AO1-A])

HSP 1 Score: 221.861 bits (564), Expect = 9.324e-65
Identity = 135/328 (41.16%), Postives = 185/328 (56.40%), Query Frame = 0
Query:   75 MAEIQEPSYSESDRKHMRRALHLAAQALGKTRPNPVVGCVILDQEGVVVGEGFHPKAGQPHAEVFALKEAGDRARGGTVYVTLEPCNHHGKTPPCVDALLEAGIKKVVAGMVDPFPLVGGKGLARLADNGVEVVVGCEEGKCQALNRPFVHRVQHGTPLGFLPLTYSRQDFVRPAPATVQLGDGGKALEMI-------DAIVVDFN-VKGEGLQTVAALQTAGLLQDEVVRIVLANDL----SALPVEWAKHKKASVRKVVLTTSIAGQEAAVEVLEGRGVEVIAMPT-DPLAVGKYMHGLGLLSALWLLCPEGAKRAVKAGVVQDLW 389
            M +    S+SE D  ++ R + LA QALG+T PNP+VG +++  +  +VGEGFHP+AG  HAEVFAL+EAGDRA G TVYV LEPCNH+G+TPPC +AL+ AG+K+VV GMVDP P V G G+ RL + G+EV VG EE  CQ LN  F+HR++H  P G      +    +       Q   G  +   +       DA++V  N V+ +  Q    L T G++    VR+V++  L    SA   EW          VVLT   A  +   E L   GVEV+  P   P AV +Y +  G LS LW    +   +A+ +G+VQ ++
Sbjct:    1 MIDSSTESHSEVDSPYIHRCIELARQALGRTAPNPLVGAIVV-ADNQIVGEGFHPRAGASHAEVFALQEAGDRAWGATVYVNLEPCNHYGRTPPCTEALIAAGVKRVVVGMVDPDPRVSGGGIQRLREAGIEVKVGVEEKACQQLNEAFIHRIRHQLPWGIFKYAMTLDGKIATTTGHSQWVTGEASRRWVHQLRGTCDAVIVGGNTVRKDNPQ----LTTHGVVDRNPVRMVMSRSLNLPRSAQLWEWV------APTVVLTEQGANPQLQTE-LGNWGVEVVEFPQLTPRAVMEYGYQRGFLSVLWECGGQLGAQAIASGMVQKVY 316          
BLAST of EWM28807.1 vs. NCBI_GenBank
Match: gi|1210195333|dbj|BAZ14387.1| (riboflavin biosynthesis protein RibD [Calothrix sp. NIES-4071] >gi|1210241515|dbj|BAZ60534.1| riboflavin biosynthesis protein RibD [Calothrix sp. NIES-4105])

HSP 1 Score: 221.476 bits (563), Expect = 2.327e-64
Identity = 138/334 (41.32%), Postives = 191/334 (57.19%), Query Frame = 0
Query:   71 DEESMAEIQEPSYSES-------DRKHMRRALHLAAQALGKTRPNPVVGCVILDQEGVVVGEGFHPKAGQPHAEVFALKEAGDRARGGTVYVTLEPCNHHGKTPPCVDALLEAGIKKVVAGMVDPFPLVGGKGLARLADNGVEVVVGCEEGKCQALNRPFVHRVQHGTPLGFLPLTYSRQDFVRPA---PATVQLGDGGKALEMI----DAIVVDFN-VKGEGLQTVAALQTAGLLQDEVVRIVLANDLSALPVEWAKHKKASVRKVVLTTSIAGQEAAVEVLEGRGVEVIAMP-TDPLAVGKYMHGLGLLSALWLLCPEGAKRAVKAGVVQDL 388
             +E+        YS+S       D + M+R L LA +ALG T PNP+VG VI+ ++G ++GEGFHPKAG+PHAEVFAL+EAG+ ARG T+YV+LEPCNH+G+TPPC +A+++AG+ KVV GMVDP PLV G G+A+L   G+EV+VG EE  CQ LN  F+HR+ H  PLG L    +    +       A V   D   A+  +    DA+V+  N V+ +     +  Q+A       +R+V++  L  LPVE    +      +VLT++ A  +     L  RGVEVI M    P     Y +  G  + LW      A  A+KAG VQ +
Sbjct:   17 SQENAINTSTLGYSQSSEVGTDFDARMMQRCLELARRALGCTSPNPMVGAVIV-KDGKIIGEGFHPKAGEPHAEVFALREAGENARGATIYVSLEPCNHYGRTPPCSEAVIKAGLAKVVVGMVDPNPLVAGGGIAKLRSGGIEVIVGVEEAACQKLNEGFIHRILHRRPLGILKYAMTLDGKIATTTGHSAWVTSRDSRNAVYQVRVASDAVVIGGNTVRKDNPYLTSHDQSA----RNPLRVVMSRTLD-LPVEAHLWQTEEAPTLVLTSTGANPDFQAS-LRRRGVEVIEMDLLTPDKAMAYFYERGFCNVLWECGGTLAASAIKAGAVQKV 343          
BLAST of EWM28807.1 vs. NCBI_GenBank
Match: gi|550813629|gb|ERT05081.1| (riboflavin biosynthesis protein RibD [Lyngbya aestuarii BL J])

HSP 1 Score: 219.935 bits (559), Expect = 3.783e-64
Identity = 127/314 (40.45%), Postives = 176/314 (56.05%), Query Frame = 0
Query:   81 PSYSESDRKHMRRALHLAAQALGKTRPNPVVGCVILDQEGVVVGEGFHPKAGQPHAEVFALKEAGDRARGGTVYVTLEPCNHHGKTPPCVDALLEAGIKKVVAGMVDPFPLVGGKGLARLADNGVEVVVGCEEGKCQALNRPFVHRVQHGTPLGFLPLTYSRQDFVRPAPATVQLGDGGKALEMIDAIVVDFNVKGEGLQTVAA----LQTAGLLQDEVVRIVLANDLSALPVEWAKHKKASVRKVVLTTSIAGQEAAVEVLEGRGVEVIAM-PTDPLAVGKYMHGLGLLSALWLLCPEGAKRAVKAGVVQDLW 389
            P   E DR+ M R L LA QALGKT PNP+VG V++  +  +VGEGFHP AGQPHAEVFAL++AG++A+G TVYV LEPCNH+G+TPPC +AL++A + KVV GM+DP PLV G+G+ RL   G+EV+VG E+  CQ LN  F+HR+ H  PLG      +    +              A + +  + V  +    G  TV      L T    +   +R+V++  L  LP+E           +V TT  A  +   E L+ +GVEV+ + P  P  V  +++    LS LW      A  A+  G +Q +W
Sbjct:    5 PIPPEFDRQMMLRCLELARQALGKTAPNPLVGSVVVQDDYNIVGEGFHPGAGQPHAEVFALRDAGEQAKGATVYVNLEPCNHYGRTPPCTEALIKAKVAKVVVGMIDPNPLVAGQGVERLKQAGIEVIVGVEQEACQQLNEGFIHRILHHQPLGIFKYAMTLDGKIATTTGHSAWITSPTARQQVHQLRVACDAVIVGGNTVRRDNPHLTTHNQGKPNPLRVVMSRKLD-LPLEANLWDIKEANTLVFTTKDADPDCQ-EQLQKKGVEVVVLSPLTPKTVMTHLYERQFLSVLWECGGTLAASAIAEGAIQKIW 316          
The following BLAST results are available for this feature:
BLAST of EWM28807.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111230|gb|EWM28807.1|0.000e+0100.00riboflavin biosynthesis protein [Nannochloropsis g... [more]
gi|808797791|ref|WP_046280111.1|4.345e-6842.06bifunctional diaminohydroxyphosphoribosylaminopyri... [more]
gi|501590381|ref|WP_012594570.1|2.536e-6741.61bifunctional diaminohydroxyphosphoribosylaminopyri... [more]
gi|506263771|ref|WP_015783546.1|1.682e-6641.61bifunctional diaminohydroxyphosphoribosylaminopyri... [more]
gi|515855285|ref|WP_017285913.1|2.413e-6541.08bifunctional diaminohydroxyphosphoribosylaminopyri... [more]
gi|299115418|emb|CBN75583.1|2.859e-6542.42riboflavin biosynthesis protein [Ectocarpus silicu... [more]
gi|1121220266|ref|WP_073547706.1|6.813e-6541.19riboflavin biosynthesis protein RibD [Chroogloeocy... [more]
gi|1111735524|gb|OJJ21982.1|9.324e-6541.16riboflavin biosynthesis protein RibD [Roseofilum r... [more]
gi|1210195333|dbj|BAZ14387.1|2.327e-6441.32riboflavin biosynthesis protein RibD [Calothrix sp... [more]
gi|550813629|gb|ERT05081.1|3.783e-6440.45riboflavin biosynthesis protein RibD [Lyngbya aest... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1867rna1867Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications