EWM30533.1, cds186 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30533.1 vs. NCBI_GenBank
Match: gi|585113197|gb|EWM30533.1| (transcription initiation factor tfiid subunit 5 [Nannochloropsis gaditana]) HSP 1 Score: 1271.53 bits (3289), Expect = 0.000e+0 Identity = 613/613 (100.00%), Postives = 613/613 (100.00%), Query Frame = 0 Query: 1 MEDAQQEERVLHWLKKRGYTEVAKHYEEDQAHAAVGSAEEGNESEDSSVPSGAFTDERLLCKRIGEANQSALLFRSLRMSDPMLYHRNYNELQTWTCNALEAYKPELLTVAFPVFVHSYLKLVERGMIEAARAFLQTWGPDHAETYQLELRSLTAVQRPDHLTAGNGFVKRALTDKFVLRLCSISYRLLQSFLSDHNLLLIMEILNEQVHVVVEERPPMPRFQVVTGGRGQISHAFTVRWRATGLGGSDVKDDSSRPPYNAPLFQKLEALAAKTRQEIAMGVADPGNPTVLMASLTNTYDGCTVARMTTDATQLAAGFHDRAVRVFRLAGEGPVGMENGNGSKLHSDGGEQAPEGPLIMRGHSQPVHGVSWAPEQQHLLSASSDGTVRLWDVAASRNVCVYRSPTDVPVWDVSFAPVGHYFASGSYDRVGRVWCTNRTQPVRLLVGHYSDVSCVAWHPNCSYLVTGSWDKTVRLWDLGSGRCFRLYSGHFGPVTALTVSPDGQFLAGAGLGGGQGNEDGVIRIWQVASGREVAVLRGHEGPVHRLNYSADGTVLASGGADMTVRTWDMNGDFASLMSSVSLAPHSTFHTKATPVLDVTFTKRNLLLASGPIMS 613 MEDAQQEERVLHWLKKRGYTEVAKHYEEDQAHAAVGSAEEGNESEDSSVPSGAFTDERLLCKRIGEANQSALLFRSLRMSDPMLYHRNYNELQTWTCNALEAYKPELLTVAFPVFVHSYLKLVERGMIEAARAFLQTWGPDHAETYQLELRSLTAVQRPDHLTAGNGFVKRALTDKFVLRLCSISYRLLQSFLSDHNLLLIMEILNEQVHVVVEERPPMPRFQVVTGGRGQISHAFTVRWRATGLGGSDVKDDSSRPPYNAPLFQKLEALAAKTRQEIAMGVADPGNPTVLMASLTNTYDGCTVARMTTDATQLAAGFHDRAVRVFRLAGEGPVGMENGNGSKLHSDGGEQAPEGPLIMRGHSQPVHGVSWAPEQQHLLSASSDGTVRLWDVAASRNVCVYRSPTDVPVWDVSFAPVGHYFASGSYDRVGRVWCTNRTQPVRLLVGHYSDVSCVAWHPNCSYLVTGSWDKTVRLWDLGSGRCFRLYSGHFGPVTALTVSPDGQFLAGAGLGGGQGNEDGVIRIWQVASGREVAVLRGHEGPVHRLNYSADGTVLASGGADMTVRTWDMNGDFASLMSSVSLAPHSTFHTKATPVLDVTFTKRNLLLASGPIMS Sbjct: 1 MEDAQQEERVLHWLKKRGYTEVAKHYEEDQAHAAVGSAEEGNESEDSSVPSGAFTDERLLCKRIGEANQSALLFRSLRMSDPMLYHRNYNELQTWTCNALEAYKPELLTVAFPVFVHSYLKLVERGMIEAARAFLQTWGPDHAETYQLELRSLTAVQRPDHLTAGNGFVKRALTDKFVLRLCSISYRLLQSFLSDHNLLLIMEILNEQVHVVVEERPPMPRFQVVTGGRGQISHAFTVRWRATGLGGSDVKDDSSRPPYNAPLFQKLEALAAKTRQEIAMGVADPGNPTVLMASLTNTYDGCTVARMTTDATQLAAGFHDRAVRVFRLAGEGPVGMENGNGSKLHSDGGEQAPEGPLIMRGHSQPVHGVSWAPEQQHLLSASSDGTVRLWDVAASRNVCVYRSPTDVPVWDVSFAPVGHYFASGSYDRVGRVWCTNRTQPVRLLVGHYSDVSCVAWHPNCSYLVTGSWDKTVRLWDLGSGRCFRLYSGHFGPVTALTVSPDGQFLAGAGLGGGQGNEDGVIRIWQVASGREVAVLRGHEGPVHRLNYSADGTVLASGGADMTVRTWDMNGDFASLMSSVSLAPHSTFHTKATPVLDVTFTKRNLLLASGPIMS 613
BLAST of EWM30533.1 vs. NCBI_GenBank
Match: gi|553180019|ref|XP_005852804.1| (transcription initiation factor tfiid subunit, partial [Nannochloropsis gaditana CCMP526] >gi|553195757|ref|XP_005856200.1| transcription initiation factor tfiid subunit, partial [Nannochloropsis gaditana CCMP526] >gi|422292848|gb|EKU20150.1| transcription initiation factor tfiid subunit, partial [Nannochloropsis gaditana CCMP526] >gi|422295729|gb|EKU23028.1| transcription initiation factor tfiid subunit, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 470.7 bits (1210), Expect = 1.317e-161 Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0 Query: 1 MEDAQQEERVLHWLKKRGYTEVAKHYEEDQAHAAVGSAEEGNESEDSSVPSGAFTDERLLCKRIGEANQSALLFRSLRMSDPMLYHRNYNELQTWTCNALEAYKPELLTVAFPVFVHSYLKLVERGMIEAARAFLQTWGPDHAETYQLELRSLTAVQRPDHLTAGNGFVKRALTDKFVLRLCSISYRLLQSFLSDHNLLLIMEILNEQVHVVVEERPPMPRFQVVT 226 MEDAQQEERVLHWLKKRGYTEVAKHYEEDQAHAAVGSAEEGNESEDSSVPSGAFTDERLLCKRIGEANQSALLFRSLRMSDPMLYHRNYNELQTWTCNALEAYKPELLTVAFPVFVHSYLKLVERGMIEAARAFLQTWGPDHAETYQLELRSLTAVQRPDHLTAGNGFVKRALTDKFVLRLCSISYRLLQSFLSDHNLLLIMEILNEQVHVVVEERPPMPRFQVVT Sbjct: 1 MEDAQQEERVLHWLKKRGYTEVAKHYEEDQAHAAVGSAEEGNESEDSSVPSGAFTDERLLCKRIGEANQSALLFRSLRMSDPMLYHRNYNELQTWTCNALEAYKPELLTVAFPVFVHSYLKLVERGMIEAARAFLQTWGPDHAETYQLELRSLTAVQRPDHLTAGNGFVKRALTDKFVLRLCSISYRLLQSFLSDHNLLLIMEILNEQVHVVVEERPPMPRFQVVT 226
BLAST of EWM30533.1 vs. NCBI_GenBank
Match: gi|674235008|gb|KFK27773.1| (hypothetical protein AALP_AA8G427000 [Arabis alpina]) HSP 1 Score: 348.206 bits (892), Expect = 9.565e-108 Identity = 220/687 (32.02%), Postives = 340/687 (49.49%), Query Frame = 0 Query: 7 EERVLHWLKKRGYTEVAKHYEEDQAHAAVGSAEEGNESEDSSVPSGAFTDERLLCKRIGEANQSALLFRSLRMSDPMLYHRNYNELQTWTCNALEAYKPELLTVAFPVFVHSYLKLVERGMIEAARAFLQTWGPDHAETYQLELRSLTAVQRPDHLTAGNGFVKRALTDKFVLRLCSISYRLLQSFLSDHNLLLIMEILNEQVHVVVEERPP------MPRFQVVTGGRGQISH-------------AFTVRWRATGLGGSDVK----------DDSSRPPYNA----PLFQKLE-------------------ALAAKTRQEIAMGV-------------------ADPGNPTVLMASLTNTYDGCTVARMTTDATQLAAGFHDRAVRVFRLA-----GEGPVGMENGNGSKLHSDGGEQAPEGPLIMRGHSQPVHGVSWAPEQQHLLSASSDGTVRLWDVAASRNVCVYRSPTDVPVWDVSFAPVGHYFASGSYDRVGRVWCTNRTQPVRLLVGHYSDVSCVAWHPNCSYLVTGSWDKTVRLWDLGSGRCFRLYSGHFGPVTALTVSPDGQFLAGAGLGGGQGNEDGVIRIWQVASGREVAVLRGHEGPVHRLNYSADGTVLASGGADMTVRTWDMNGDFASLMS------SVSLAPHSTFHTKATPVLDVTFTKRNLLLASGPI 611 +E V +LKK+G+ AK +EED H + SS S + ++ L K I +QS DP Y Y++L++W N+L+ YK ELL V +PVF+H Y+ LV +G + ARAF ++ DH + +L+ L V P HL F + K +++C SY LL +L L++ I+NE ++ V P + +V + Q +H + R TGL K DDS + + +KL+ +LA + + E+A+ V + P+V + NT++G A ++ D + +A+GF D +++V+ +A G G + EN ++ G ++ ++ GHS PV+ +++P LLS+S+D T+RLW + N+ Y+ + PVWDV F+P GHYFAS S+DR R+W +R QP+R++ GH SDV CV WHPNC+Y+ TGS DKTVRLWD+ +G+C R++ GH V +L +SPDG+++A G+EDG I +W +++ R + L GH V L YS +G++LASG AD TV+ WD+ + S L TF TK+TPV + F++RNLL A+G + Sbjct: 7 DEFVRGYLKKKGFKSSAKAFEEDLHH-----------NNGSSFSSIDYHNDPELTKLIRSFSQSK--------DDPSQYSECYSKLRSWAYNSLDLYKHELLRVMYPVFIHCYMDLVGKGHTQEARAFFNSFRKDHEMIHLRDLQKLEGVLAPSHLEEME-FARSLRQSKVNIKICQYSYDLLLQYLHKIESTLMLGIINEHINFQVHSGHPNSASEDIEAVTIVGSFQDQANHINQKEIQWGLLEDSLEDRLEKTGLLSDSEKGQGESKDGDMDDSKKRSIESGKQGSSIKKLKKDKAGNATAKVVRQETSIVSLAPRVKSELALPVMSTEVEQSILEDLRNRVQLSSVAMPSVSFYTFVNTHNGLNCASISHDGSLVASGFSDSSIKVWDMAKIGQTGSGALPGENDTNDQIVGPNGRRSYT---LLLGHSGPVYSATFSPPGDFLLSSSADTTIRLWSTKLNANLVCYKG-HNYPVWDVQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGKCARIFVGHRSMVLSLAMSPDGRYMAS-------GDEDGTIMMWDLSTARCITPLMGHNSCVWSLTYSGEGSLLASGSADCTVKLWDVTSSTKLTKAEEKNGNSNRLRSLRTFPTKSTPVHALRFSRRNLLFAAGAL 662
BLAST of EWM30533.1 vs. NCBI_GenBank
Match: gi|567139369|ref|XP_006394764.1| (hypothetical protein EUTSA_v10003767mg [Eutrema salsugineum] >gi|557091403|gb|ESQ32050.1| hypothetical protein EUTSA_v10003767mg [Eutrema salsugineum]) HSP 1 Score: 332.798 bits (852), Expect = 8.506e-102 Identity = 219/692 (31.65%), Postives = 330/692 (47.69%), Query Frame = 0 Query: 1 MEDAQQEERVLHWLKKRGYTEVAKHYEEDQAHAAVGSAEEGNESEDSSVPSGAFTDERLLCKRIGEANQSALLFRSLRMSDPMLYHRNYNELQTWTCNALEAYKPELLTVAFPVFVHSYLKLVERGMIEAARAFLQTWGPDHAETYQLELRSLTAVQRPDHLTAGNGFVKRALTDKFVLRLCSISYRLLQSFLSDHNLLLIMEILNEQVHVVVEERPP------------MPRFQVV------------------------TGG-------------RGQISHAFTVRWRATGLGGSDVKDDSSRPPYNAPLF-----QKLEALAAKTRQEIAMGVADPGNPTVLMASLTNTYDGCTVA-------------------RMTTDATQLAAGFHDRAVRVFRLAGEGPVGMENGNGSKLHSDG--GEQAPEGPLIMRGHSQPVHGVSWAPEQQHLLSASSDGTVRLWDVAASRNVCVYRSPTDVPVWDVSFAPVGHYFASGSYDRVGRVWCTNRTQPVRLLVGHYSDVSCVAWHPNCSYLVTGSWDKTVRLWDLGSGRCFRLYSGHFGPVTALTVSPDGQFLAGAGLGGGQGNEDGVIRIWQVASGREVAVLRGHEGPVHRLNYSADGTVLASGGADMTVRTWDMNGDFASLMS------SVSLAPHSTFHTKATPVLDVTFTKRNLLLASGPI 611 M+ Q +E V+ +LKK+G+ AK EE + N S SS+ + ++ L K I +QS DP Y Y++L++W N+L+ YK ELL V +PVF+H Y+ LV +G + ARAF ++ DH + +L+ L V P HL F + K +++C SY LL +L L++ I+NE ++ V P + FQ TGG G + + R G GS +K NA + +LA + + E+A+ V ++ L N +VA ++ D + +A GF D +V+V+ +A G G G +D G ++ GHS PV+ +++P +LS+S+D T+RLW + N+ Y+ + PVWDV F+P GHYFAS S+DR R+W +R QP+R++ GH SDV CV WHPNC+Y+ TGS DKTVRLWD+ +G C R++ GH V +L +SPDG+++A G+EDG I +W +++ R + L GH V L+YS +G++LASG AD TV+ WD+ + S L TF TK+TPV + F++RNLL A+G + Sbjct: 1 MDPEQVDEFVMCYLKKKGFNSAAKRLEE--------VLHQNNGSSFSSID---YHNDPELTKLIRSFSQSE--------DDPTRYREGYSKLRSWAYNSLDLYKHELLRVMYPVFIHCYMDLVGKGHTQEARAFFNSFRKDHEMIHIRDLQKLEGVLAPSHLEEME-FARSLRQSKVNIKICQYSYDLLLQYLHRTESTLMLGIINEHINFQVYSGQPNSASDDIEAVTIVGSFQDTANHINQKEIQWGLLEDSLEDRLEKTGGLLSDSEKGQGESKDGDMDDSSKKRSTEIGKQGSSIKKLKKDKAGNATAKVARQETSMVSLAPRVKPELALPVMSTDVEQSILEDLRNRVQLSSVAMPSVSFYTFLNTHNGLNCASISHDGSLVAGGFSDSSVKVWDMAKIGQAGSCALQGENDTNDQIVGPNGRRNYTLLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKG-HNYPVWDVQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGKYMAS-------GDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLTKAEEKNGNSNRLRSLRTFPTKSTPVHALRFSRRNLLFAAGAL 664
BLAST of EWM30533.1 vs. NCBI_GenBank
Match: gi|909137542|gb|KNE63228.1| (hypothetical protein AMAG_08377 [Allomyces macrogynus ATCC 38327]) HSP 1 Score: 326.635 bits (836), Expect = 4.190e-100 Identity = 196/573 (34.21%), Postives = 293/573 (51.13%), Query Frame = 0 Query: 85 YHRNYNELQTWTCNALEAYKPELLTVAFPVFVHSYLKLVERGMIEAARAFLQTWGPDHAETYQLELRSLTAVQRPDHLTAGNGFVKRALTDKFVLRLCSISYRLLQSFLSDHNLLLIMEILNEQVHVVVEERPPMPRFQVVTGGRGQISHAFTVRWRA---TGLGGSDVKDDSSRPPYNAP------LFQKLEALAAKTRQEIAMGVADPGN---------PTVLMASLTNTYDGCTVARMTTDATQLAAGFHDRAVRVFRLA-----------GEGPVGMENGNGSKLHSDGGEQAPEGP--LIMRGHSQPVHGVSWAPEQQHLLSASSDGTVRLWDVAASRNVCVYRSPTDVPVWDVSFAPVGHYFASGSYDRVGRVWCTNRTQPVRLLVGHYSDVSCVAWHPNCSYLVTGSWDKTVRLWDLGSGRCFRLYSGHFGPVTALTVSPDGQFLAGAGLGGGQGNEDGVIRIWQVASGREVAVLRGHEGPVHRLNYSADGTVLASGGADMTVRTWDMNGDFASLMSSVSLAPHS---------------TFHTKATPVLDVTFTKRNLLLASGPI 611 Y +Y++L+ W +L+ +K EL + FP+F HSYL ++ +GM+ AR F ++ DH + +L L + P + N + + +++F + + S +++LL SFL D++ + ++ ILN V + V + TG G S+ ++ TG+ DV+ S + P + + AK +E + D + P++ + NTYD T A MT DAT +AAGF D A+R+ L G P M + + + + PEG ++RGH+ V G S++P++++L+S S D TVRLW + NV YR + PVWDV F P GHYFA+ S+DR R+W + P+R+ GH SDV V +HPN SYL TGS DKT RLWD+ G C R++ GH G V A+ SP+G+ LA AG +D + +W +ASG + + GH G V + +S+DG +LAS G D TVR WD V + P + TF TK TP + V FT+RNLLLA+GP Sbjct: 48 YDSSYSKLRRWIEESLDVFKTELKDILFPLFEHSYLDMIAKGMVNEARQFFDSYKSDHVAFHSNDLHQLDMIHFPTQIQE-NEYARMHRSNRFTVSMTSTTFQLLISFLEDNDFVALLRILNTHVKIDVTNSKAKKKASGNTGVLGLTSNLGEFHAQSEVHTGMPPLDVRQLSLQHRAENPADPPPPKPVPVPPMKAKEVRETVELIKDVAHRASLSPTSLPSICFYTWHNTYDALTCATMTHDATLIAAGFSDSAIRIHSLTKDPLRAVIPRPGLTPDDMHHLGPADI---DAMREPEGSPSKLLRGHAGAVFGTSFSPDKRYLVSCSEDQTVRLWSLETFANVVCYRGHS-YPVWDVEFGPEGHYFATASHDRTARLWSCDHIYPLRIFAGHLSDVDTVRFHPNSSYLATGSSDKTARLWDVSRGACVRVFPGHSGAVQAVAFSPNGRLLATAG-------DDKYVHLWDIASGTRIKKMGGHRGLVTSVVFSSDGALLASAGLDGTVRLWDALKGEGEDEPVVVVDPATGKKKRKKVANNDLIETFRTKKTPAIGVQFTRRNLLLATGPF 608
BLAST of EWM30533.1 vs. NCBI_GenBank
Match: gi|1101630424|ref|XP_018978710.1| (PREDICTED: transcription initiation factor TFIID subunit 5 isoform X3 [Cyprinus carpio]) HSP 1 Score: 318.931 bits (816), Expect = 4.201e-97 Identity = 196/598 (32.78%), Postives = 310/598 (51.84%), Query Frame = 0 Query: 81 DPMLYHRNYNELQTWTCNALEAYKPELLTVAFPVFVHSYLKLVERGMIEAARAFLQTWGPDHAETYQLELRSLTAVQRPDHLTAGNGFVKRALTDKFVLRLCSISYRLLQSFLSDHNLLLIMEILNEQVHVVVEERPPMPRFQV--VTG-----GRGQISHAFTVR------------------------------WRATGLGGSDVKDDSSRPPYN-APLFQ-----KLEALA--AKTRQEIAMGVADPGN-PTVLMASLTNTYDGCTVARMTTDATQLAAGFHDRAVRVF--------RLAGEGPVGM-ENGNGSKLHSDGGEQAPEGPLIMRGHSQPVHGVSWAPEQQHLLSASSDGTVRLWDVAASRNVCVYRSPTDVPVWDVSFAPVGHYFASGSYDRVGRVWCTNRTQPVRLLVGHYSDVSCVAWHPNCSYLVTGSWDKTVRLWDLGSGRCFRLYSGHFGPVTALTVSPDGQFLAGAGLGGGQGNEDGVIRIWQVASGREVAVLRGHEGPVHRLNYSADGTVLASGGADMTVRTWDM--------NGDFASLMSSVSLAPHS------TFHTKATPVLDVTFTKRNLLLASG 609 DP LY Y+ L+ + + L+ ++ EL + +P+FVH YL+LV A+AF + + D YQ +LR L + + +HL GN + T +FVLR+ SY+LL+ L + + I I+ E +++ + + P + Q+ ++G GR +++ A + LG K D + P N PL + KL+ + ++ + I +G P N P++ +L N Y G T T D++ LA GF D VRV+ ++ + M + + L E+ I+ GHS PV+GVS++P++ +LLS+S DGTVRLW + + Y+ + PVWD F+P G+YF SG +DRV R+W T+ QP+R+ GH +DV+C +HPN +Y+ TGS D+T+RLWD+ +G C R+++GH GP+ +L SP+G+FLA G+ DG + +W + G + L+GH ++ L +S DG +LASG D TVR W+ DF + + L +S T+H+K+TPV + FT+RNLLLA+G Sbjct: 24 DPSLYQVYYSGLKNFIESVLDCHRAELSQLFYPLFVHMYLELVYNNHENEAKAFFEKFSGDQECYYQDDLRVLCGLTKKEHL-KGNEVLLDFRTSRFVLRISRDSYQLLKRHLQERHNNQIWNIIQEHLYIDIFDGMPRSKSQIDSMSGSLAGEGRRELNKAKVFHGLLKEPEIEVPLDDEDDEAENEEGKPKKKKTKKDSLGSKSKKQDPNAPQQNRIPLPELKDSDKLDKIMYMKESTKRIRLG---PENLPSICFYTLLNAYQGLTAVDFTDDSSLLAGGFADSTVRVWSVTPKKLRKVKSAADLNMIDKESDDVLERIMDEKTASESKILYGHSGPVYGVSFSPDRNYLLSSSEDGTVRLWSLLTFTCLVGYKG-HNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSTDRTIRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLAS-------GSTDGRVLLWDIGHGLMIGELKGHTDTIYSLKFSRDGEILASGSMDNTVRLWNSMKAFDEVETDDFTATTGHIHLPDNSQELLLGTYHSKSTPVTHLHFTRRNLLLAAG 609
BLAST of EWM30533.1 vs. NCBI_GenBank
Match: gi|1126221583|ref|XP_019645033.1| (PREDICTED: transcription initiation factor TFIID subunit 5-like [Branchiostoma belcheri]) HSP 1 Score: 307.76 bits (787), Expect = 4.346e-92 Identity = 187/574 (32.58%), Postives = 297/574 (51.74%), Query Frame = 0 Query: 100 LEAYKPELLTVAFPVFVHSYLKLVERGMIEAARAFLQTWGPDHAETYQLELRSLTAVQRPDHLTAGNGFVKRALTDKFVLRLCSISYRLLQSFLSDHNLLLIMEILNEQVHVVVEERPPMPRFQVVTGGRGQISHAFTVRWRATGLGG-------------------------------------SDVKDDSSRPPYNAPLFQ-----KLEALAAKTRQEIAMGVADPGNPTVLMASLTNTYDGCTVARMTTDATQLAAGFHDRAVRVFRLAGEGPVGMENGNG-SKLHSDGG--------EQAPEGPLIMRGHSQPVHGVSWAPEQQHLLSASSDGTVRLWDVAASRNVCVYRSPTDVPVWDVSFAPVGHYFASGSYDRVGRVWCTNRTQPVRLLVGHYSDVSCVAWHPNCSYLVTGSWDKTVRLWDLGSGRCFRLYSGHFGPVTALTVSPDGQFLAGAGLGGGQGNEDGVIRIWQVASGREVAVLRGHEGPVHRLNYSADGTVLASGGADMTVRTWDMNGDFASLMSS-----------VSLAP--HSTFHTKATPVLDVTFTKRNLLLASG 609 L+A+K EL + +PVF+H YL+LV + A+ F + + + +Q +LR+L+ V+ + + N + + KFVLR+ SY+ L+ +L H+ ++ IL + + + V + P R QV + A + L G + D ++ PP PL + KLE + + + + P++ +L N + + ++ D++ LAAGF D VRV+ L+ + M + +L + E++ ++ GH+ PV+ S++P+++ LL++S DGTVRLW + N+ VY+ + PVWDV F+P G+YF SG +DRV R+W T++ QP+R+ VGHYSDV+C+ +HPN +Y+ TGS D+TVRLWD+ +G C R+ +GH V L SPDG++LA AG+ D + +W +A GR +A ++GH PV+ L +S +GT+LASGG D TV+ WD+ F + S V + P +F TKATPVL + FT RNLLL G Sbjct: 124 LDAHKHELGCLLYPVFIHMYLQLVYNKHEKEAQKFFNRFSVEQEDWHQEDLRTLSTVKTREQMEV-NDLMDTFRSSKFVLRMSRDSYQSLRRYLKQHDHRELLSILQDHLFIDVFDGVPRNREQVQATSGAMMGEARRDANKVKVLYGLPKEPDINVPLDDDDEGGDGEDKPKKKKQKKDLLLNKNKKADPNAPPPSRIPLPELKDADKLEKVLSWKEGLKRVPLGRDNLPSICFYTLANAFQNVSAVGISEDSSLLAAGFEDCNVRVWSLSPQRLRTMRGASELDQLDKEADDIVERMMDEKSAADSWLLHGHTGPVYATSFSPDREQLLTSSEDGTVRLWSLHTYSNLVVYKG-HNYPVWDVQFSPTGYYFVSGGHDRVARLWGTDQFQPIRMFVGHYSDVTCIQYHPNSNYVATGSSDRTVRLWDVLNGNCVRVMTGHKAAVHTLAWSPDGRYLASAGV-------DKNVLLWDIAYGRLLAEMKGHTDPVYSLCFSREGTILASGGIDNTVKIWDVQKVFEEIAGSDDLTSLDRASLVEVGPLLLGSFATKATPVLKLHFTHRNLLLGCG 688
BLAST of EWM30533.1 vs. NCBI_GenBank
Match: gi|1127415786|gb|OLL21698.1| (Transcription initiation factor TFIID subunit 5 [Neolecta irregularis DAH-3]) HSP 1 Score: 306.99 bits (785), Expect = 4.348e-92 Identity = 202/614 (32.90%), Postives = 304/614 (49.51%), Query Frame = 0 Query: 85 YHRNYNELQTWTCNALEAYKPELLTVAFPVFVHSYLKLVERGMIEAARAFLQTWGPDHAETYQLELRSLTAVQRPDHLTAGN-GFVKRALTDKFVLRLCSISYRLLQSFLSDH------------NLLLIMEIL---------------------------NE------QVHVVVEERPPMPRFQVVTGGRGQISHAFTVRWRATG----------LGGSDVKDDSSR-----PPYNAPLFQKLEALAAKTRQEIAMGVADPGN--PTVLMASLTNTYDGCTVARMTTDATQLAAGFHDRAVRVFRLAGE---GPVGMENGNGSKLHSDGGEQAPEGPLIMRGHSQPVHGVSWAPEQQHLLSASSDGTVRLWDVAASRNVCVYRSPTDVPVWDVSFAPVGHYFASGSYDRVGRVWCTNRTQPVRLLVGHYSDVSCVAWHPNCSYLVTGSWDKTVRLWDLGSGRCFRLYSGHFGPVTALTVSPDGQFLAGAGLGGGQGNEDGVIRIWQVASGREVAVLRGHE-GPVHRLNYSADGTVLASGGADMTVRTWDMNG----DFASLMSSVSLA----------PHST--------FHTKATPVLDVTFTKRNLLLASG 609 Y + Y +++W ++L+ Y+PEL + +P+FVHS+L LV +A+ F T+G +H + ++R L+ V H+ + RA +K+ LR ++ L+ FL +H N + ME+L NE ++ ++ E + + S A ++ +T L + D SR PP FQ R+ + + DP + P+V M +L NT+DG + DA+ LA GF + V+++ L G+ GP G +G+ + S M HS PV+GV ++P+ ++LLS S D TVRLW + + Y+ P+WDV+F P GHYFA+ S+D+ R+W P+R+ GH SDV CV +HPN +Y+ TGS DKT RLWD+ G+ R+++GH GPVT +T+SPDG++LA AG EDGVI IW + SG+ + +RGH G ++ L++S +GTVL SGG+DMTVR WD+ D A+L S A P +T FHTK TPV V FT+ NL+LA+G Sbjct: 64 YAQAYVLVRSWVESSLDLYRPELRRILYPLFVHSFLDLVAAAESASAKDFFDTYGKEHELHHPHDMRILSTVTSQSHIKENELAILYRA--NKYNLRFSRTTFDLMMHFLDEHHQAGGKIALRLINSYINMEVLAGARGAATSEDILAEGEGISGQHDKSLNEYNSQDVKLGILPPEESAEKEMEAILADEDAKSSATCAQFGSTDSSSLVEEYKKLRHASSSDGPSREAVPLPPMKGIDFQVELRTVKDYRRRLKL---DPQSALPSVCMYTLHNTHDGLNCIDFSKDASMLAGGFAESYVKIWSLKGDKLKGP-GRPEKDGAGMSSRR----------MISHSGPVYGVDFSPDNRYLLSCSEDTTVRLWSLDTFTAMVAYKGHAH-PIWDVAFGPFGHYFATASHDQTARLWSCEHITPLRIFAGHLSDVDCVQFHPNSAYVATGSSDKTCRLWDVQRGQSVRVFAGHNGPVTCITISPDGKWLASAG-------EDGVISIWDLGSGKRLKAMRGHAPGSIYSLSFSQEGTVLVSGGSDMTVRVWDVKKSPCIDTATLASITVAAARTQLAGKEKPENTQTDDHLKAFHTKRTPVYQVHFTRTNLVLAAG 653
BLAST of EWM30533.1 vs. NCBI_GenBank
Match: gi|1178057462|gb|ORE12402.1| (WD40 repeat-like protein [Rhizopus microsporus]) HSP 1 Score: 292.738 bits (748), Expect = 3.117e-87 Identity = 183/593 (30.86%), Postives = 294/593 (49.58%), Query Frame = 0 Query: 60 LCKRIGEANQSALLFRSLR---MSDPMLYHRNYNELQTWTCNALEAYKPELLTVAFPVFVHSYLKLVERGMIEAARAFLQTWGPDHAETYQLELRSLTAVQRPDHLTAGNGFVKRALTDKFVLRLCSISYRLLQSFLSDHNLLLIMEILNEQVHVVVEERPPMPRFQVVTGGRGQISHAFTVRWRATGLGGSDVKDDSSRPPY-NAPLFQKLEALAAKTRQEIAMGVADPGNPTVLMASLTNTYDGCTVARMTTDATQLAAGFHDRAVRVFRLAGEGPVGMENGNGSKLHSDGGEQAPEGPLIMRGHSQPVHGVSWAPEQQHLLSASSDGTVRLWDVAASRNVCVYRSPTDVPVWDVSFAPVGHYFASGSYDRVGRVWCTNRTQPVRLLVGHYSDVSCVAWHPNCSYLVTGSWDKTVRLWDLGSGRCFRLYSGHFGPVTALTVSPDGQFLAGAGLGGGQGNEDGVIRIWQVASGREVAVLRGHEGPVHRLNYSADGTVLASGGADMTVRTWDMN------------GDF--------------------------ASLMSSVSLAPH-STFHTKATPVLDVTFTKRNLLLASG 609 L ++ N + L +S++ D +Y L+ W NAL+ YK EL T+ +P+F++ +L+ RG+++ A F + DH ++ EL ++ ++ L K+ ++L I L FL + ++ I+N+ H+ + + PP +V G+ L D+ PY N + ++E+L + R+ +++G P++ + + +T D ++ DAT +A GF + ++V+ L GE + + N + G P L+ GHS P+ G+S++ + Q+L+S S D TVRLW + +N+ Y+S + PVWDV F P G YFA+ S+DR R+W + P+R+ GH SDV+ V +HPN YLVTGS DKTVRLWD+ G C R+++GH G + A+ +SP+G+++A AG ED I IW + SGR + + GH G ++ + ++AD T+L SG D TVR WD+N DF S + + H S F T+ TP+ V FTKRNL LA+G Sbjct: 48 LLQQYKTTNNTCDLLKSIQEHDFEDIETVQSSYEHLREWIMNALDIYKNELQTLLYPIFIYIFLQFKARGLVDYANDFFHAFKQDHV-MHEDELNTVFNTTS----------IQDQLAHKYTVKLSPIPLELFYRFLHESQHKTLLRIVNQ--HLNINKLPPASAGEVSDQGKSMDEARIKSEEETMEL------DEPFILPYENTDVQAEIESLN-EIRKLVSLGSL--AQPSICLYTFHHTQDQLNCIAISEDATLIAGGFSESFIKVWNLKGEK---LRDRNEMDKNLPG---TPYKKLV--GHSGPIFGLSFSHDNQYLISCSEDKTVRLWCLKTYKNLVCYKS-HNYPVWDVDFGPYGFYFATASHDRTARLWSCDHVHPLRIFAGHLSDVNTVKFHPNSKYLVTGSCDKTVRLWDVQRGTCVRVFTGHTGSIHAVAISPNGRWMASAG-------EDTNIIIWDLGSGRRLKTMTGHTGFIYSITFNADSTILVSGSGDGTVRVWDVNKNTPNEFREEQSSDFKRTKLNGKAKDKKDKMKPLLMDLNAKKSKRNMLESDDHLSMFSTRNTPIYIVQFTKRNLCLAAG 602
BLAST of EWM30533.1 vs. NCBI_GenBank
Match: gi|729714719|emb|CEI89007.1| (hypothetical protein RMCBS344292_03382 [Rhizopus microsporus]) HSP 1 Score: 292.738 bits (748), Expect = 3.252e-87 Identity = 183/593 (30.86%), Postives = 294/593 (49.58%), Query Frame = 0 Query: 60 LCKRIGEANQSALLFRSLR---MSDPMLYHRNYNELQTWTCNALEAYKPELLTVAFPVFVHSYLKLVERGMIEAARAFLQTWGPDHAETYQLELRSLTAVQRPDHLTAGNGFVKRALTDKFVLRLCSISYRLLQSFLSDHNLLLIMEILNEQVHVVVEERPPMPRFQVVTGGRGQISHAFTVRWRATGLGGSDVKDDSSRPPY-NAPLFQKLEALAAKTRQEIAMGVADPGNPTVLMASLTNTYDGCTVARMTTDATQLAAGFHDRAVRVFRLAGEGPVGMENGNGSKLHSDGGEQAPEGPLIMRGHSQPVHGVSWAPEQQHLLSASSDGTVRLWDVAASRNVCVYRSPTDVPVWDVSFAPVGHYFASGSYDRVGRVWCTNRTQPVRLLVGHYSDVSCVAWHPNCSYLVTGSWDKTVRLWDLGSGRCFRLYSGHFGPVTALTVSPDGQFLAGAGLGGGQGNEDGVIRIWQVASGREVAVLRGHEGPVHRLNYSADGTVLASGGADMTVRTWDMN------------GDF--------------------------ASLMSSVSLAPH-STFHTKATPVLDVTFTKRNLLLASG 609 L ++ N + L +S++ D +Y L+ W NAL+ YK EL T+ +P+F++ +L+ RG+++ A F + DH ++ EL ++ ++ L K+ ++L I L FL + ++ I+N+ H+ + + PP +V G+ L D+ PY N + ++E+L + R+ +++G P++ + + +T D ++ DAT +A GF + ++V+ L GE + + N + G P L+ GHS P+ G+S++ + Q+L+S S D TVRLW + +N+ Y+S + PVWDV F P G YFA+ S+DR R+W + P+R+ GH SDV+ V +HPN YLVTGS DKTVRLWD+ G C R+++GH G + A+ +SP+G+++A AG ED I IW + SGR + + GH G ++ + ++AD T+L SG D TVR WD+N DF S + + H S F T+ TP+ V FTKRNL LA+G Sbjct: 48 LLQQYKTTNNTCDLLKSIQEHDFEDIETVQSSYKHLREWIMNALDIYKNELQTLLYPIFIYIFLQFKARGLVDYANDFFHAFKQDHV-MHEDELNTVFNTTS----------IQDQLAHKYTVKLSPIPLELFYRFLHESQHKTLLRIVNQ--HLNINKLPPASAGEVSDQGKSMDEARIKSEEETMEL------DEPFILPYENTDVQAEIESLN-EIRKLVSLGSL--AQPSICLYTFHHTQDQLNCIAISEDATLIAGGFSESFIKVWNLKGEK---LRDRNEMDKNLPG---TPYKKLV--GHSGPIFGLSFSHDNQYLISCSEDKTVRLWCLKTYKNLVCYKS-HNYPVWDVDFGPYGFYFATASHDRTARLWSCDHVHPLRIFAGHLSDVNTVKFHPNSKYLVTGSCDKTVRLWDVQRGTCVRVFTGHTGSIHAVAISPNGRWMASAG-------EDTNIIIWDLGSGRRLKTMTGHTGFIYSITFNADSTILVSGSGDGTVRVWDVNKNTPNEFREEQSSDFKRTKLNGKAKDKKDKMKPLLMDLNAKKSKRNMLESDDHLSMFSTRNTPIYIVQFTKRNLCLAAG 602 The following BLAST results are available for this feature:
BLAST of EWM30533.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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