EWM28830.1, cds1839 (CDS) Nannochloropsis gaditana

Overview
NameEWM28830.1
Unique Namecds1839
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:281219..281230 +
Alignment locationCM002458.1:281348..281951 +
Alignment locationCM002458.1:282129..282229 +
Alignment locationCM002458.1:282399..282518 +
Alignment locationCM002458.1:282736..282831 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28830.1
Productepimerase 4-reductase
Orig transcript idgnl|cribi|Naga_100199g4.9700.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:281219..281230 +
CM002458.1supercontigCM002458.1:281348..281951 +
CM002458.1supercontigCM002458.1:282129..282229 +
CM002458.1supercontigCM002458.1:282399..282518 +
CM002458.1supercontigCM002458.1:282736..282831 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR029903RmlD-like-bd
IPR016040NAD(P)-bd_dom
Homology
BLAST of EWM28830.1 vs. NCBI_GenBank
Match: gi|585111254|gb|EWM28830.1| (epimerase 4-reductase [Nannochloropsis gaditana])

HSP 1 Score: 649.432 bits (1674), Expect = 0.000e+0
Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 0
Query:    1 MAEEKYLIFGKNGWIGGKLIELLQAQGKTVVLAQTRLENRESLFAELDAVKPTHVLDAAGVTGRPNIDWCETHQVETIRTNVIGTLNLAEACHLKGIHMTLYATGCIFEYDEKHPIGGPGFTEEDSPNFFGSFYSKTKAYMEDMLKSYNNVCILRVRMPISDDLNSRNFVTKIVKYDKVVNVPNSMTVLTDLLPISLLMAARKLTGIYNFTNPGAISHNQILALYKKHVDPSYTWENFTIDEQNKILAAKRSNNELDTTKFCAALPDVHIPDIHEACEKVFQRMKVNLEAEGIWPDKLPKRTNRLAPPSS 310
            MAEEKYLIFGKNGWIGGKLIELLQAQGKTVVLAQTRLENRESLFAELDAVKPTHVLDAAGVTGRPNIDWCETHQVETIRTNVIGTLNLAEACHLKGIHMTLYATGCIFEYDEKHPIGGPGFTEEDSPNFFGSFYSKTKAYMEDMLKSYNNVCILRVRMPISDDLNSRNFVTKIVKYDKVVNVPNSMTVLTDLLPISLLMAARKLTGIYNFTNPGAISHNQILALYKKHVDPSYTWENFTIDEQNKILAAKRSNNELDTTKFCAALPDVHIPDIHEACEKVFQRMKVNLEAEGIWPDKLPKRTNRLAPPSS
Sbjct:    1 MAEEKYLIFGKNGWIGGKLIELLQAQGKTVVLAQTRLENRESLFAELDAVKPTHVLDAAGVTGRPNIDWCETHQVETIRTNVIGTLNLAEACHLKGIHMTLYATGCIFEYDEKHPIGGPGFTEEDSPNFFGSFYSKTKAYMEDMLKSYNNVCILRVRMPISDDLNSRNFVTKIVKYDKVVNVPNSMTVLTDLLPISLLMAARKLTGIYNFTNPGAISHNQILALYKKHVDPSYTWENFTIDEQNKILAAKRSNNELDTTKFCAALPDVHIPDIHEACEKVFQRMKVNLEAEGIWPDKLPKRTNRLAPPSS 310          
BLAST of EWM28830.1 vs. NCBI_GenBank
Match: gi|299472397|emb|CBN77585.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 446.432 bits (1147), Expect = 8.743e-156
Identity = 205/302 (67.88%), Postives = 251/302 (83.11%), Query Frame = 0
Query:    1 MAEEKYLIFGKNGWIGGKLIELLQAQGKTVVLAQTRLENRESLFAELDAVKPTHVLDAAGVTGRPNIDWCETHQVETIRTNVIGTLNLAEACHLKGIHMTLYATGCIFEYDEKHPIGGPGFTEEDSPNFFGSFYSKTKAYMEDMLKSYNNVCILRVRMPISDDLNSRNFVTKIVKYDKVVNVPNSMTVLTDLLPISLLMAARKLTGIYNFTNPGAISHNQILALYKKHVDPSYTWENFTIDEQNKILAAKRSNNELDTTKFCAALPDVHIPDIHEACEKVFQRMKVNLEAEGIWPDKLPKRT 302
            M+++ YL++GK GW+GGKL  LL+ QGKTV LA +RLENRES+  EL+ +KPTHVL+AAGVTGRPN+DWCE+H+ ETIR NVIGTLNLA+ C  K IH T+YATGCI+EYD +H IGG GF E D+PNF  SFYS TK  +E+ML+ + NVC+LRVRMPISDDL+ RNFVTKIVKYDKVVN+PNSMTVLTDLLP+SL MA +KL G+YNF NPGAISHN+IL +YK+++DPSYT+ NFT++EQ+KIL A RSNN LD +K   ALP++ I +IH A + VF+RMK NL AEGI PDKLPKR+
Sbjct:    1 MSDQVYLLYGKTGWLGGKLTTLLREQGKTVHLADSRLENRESVLKELETIKPTHVLNAAGVTGRPNVDWCESHRPETIRANVIGTLNLADLCSSKSIHCTIYATGCIYEYDAEHTIGGKGFLESDAPNFKASFYSDTKGMVENMLRVFPNVCVLRVRMPISDDLSPRNFVTKIVKYDKVVNIPNSMTVLTDLLPVSLAMADKKLEGVYNFCNPGAISHNEILDMYKEYIDPSYTYTNFTVEEQDKILVAGRSNNTLDVSKMVNALPEMEIKEIHVAMQGVFKRMKENLTAEGIIPDKLPKRS 302          
BLAST of EWM28830.1 vs. NCBI_GenBank
Match: gi|1210514775|dbj|GAX26254.1| (3,5-epimerase/4-reductase [Fistulifera solaris])

HSP 1 Score: 408.683 bits (1049), Expect = 1.111e-140
Identity = 197/298 (66.11%), Postives = 237/298 (79.53%), Query Frame = 0
Query:    5 KYLIFG-KNGWIGGKLIELLQAQGKTVVLAQTRLENRESLFAELDAVKPTHVLDAAGVTGRPNIDWCETHQVETIRTNVIGTLNLAEACHLKGIHMTLYATGCIFEYDEKHPIG-GPGFTEEDSPNFFGSFYSKTKAYMEDMLKSYNNVCILRVRMPISDDLNSRNFVTKIVKYDKVVNVPNSMTVLTDLLPISLLMAARKLTGIYNFTNPGAISHNQILALYKKHVDPSYTWENFTIDEQNKILAAKRSNNELDTTKFCAALPDVHIPDIHEACEKVFQRMKVNLEAEGIWPDKLPK 300
            K LIFG K GWIGGK+  L + QG  V  A +R+ENRE++ AELD ++P+HVL +AG+TGRPNIDWCE+H+ ETIRTNVIGTLN+A+ C+ +GIH T+YATGCIF YD  HP+G G GFTEED PNF GSFYS+TK+Y+E +LK Y    ILRVRMPISDDL+SR+FVTKI KY+KVVN+PNSMTVLT+LLP SL MA + LTG+YNFTNPG ISHNQ+L LYKK++DP + + NFTI+EQN+IL A RSNNELDTTK       + I DI  A +  FQRMK NLEAEGI PD LP+
Sbjct:    3 KVLIFGGKTGWIGGKMYTLCKEQGIEVYNADSRIENREAVAAELDRIQPSHVLMSAGITGRPNIDWCESHRPETIRTNVIGTLNVADLCNERGIHCTVYATGCIFSYDAAHPLGSGIGFTEEDKPNFTGSFYSETKSYVEPLLKQYPTCMILRVRMPISDDLSSRSFVTKIAKYEKVVNIPNSMTVLTELLPASLKMAQKGLTGVYNFTNPGVISHNQVLDLYKKYIDPDFQYSNFTIEEQNEILKAPRSNNELDTTKLLRDTEGIEINDILTAMDLCFQRMKKNLEAEGILPDNLPE 300          
BLAST of EWM28830.1 vs. NCBI_GenBank
Match: gi|1210511660|dbj|GAX29474.1| (3,5-epimerase/4-reductase [Fistulifera solaris])

HSP 1 Score: 404.445 bits (1038), Expect = 5.577e-139
Identity = 196/298 (65.77%), Postives = 235/298 (78.86%), Query Frame = 0
Query:    5 KYLIFG-KNGWIGGKLIELLQAQGKTVVLAQTRLENRESLFAELDAVKPTHVLDAAGVTGRPNIDWCETHQVETIRTNVIGTLNLAEACHLKGIHMTLYATGCIFEYDEKHPIG-GPGFTEEDSPNFFGSFYSKTKAYMEDMLKSYNNVCILRVRMPISDDLNSRNFVTKIVKYDKVVNVPNSMTVLTDLLPISLLMAARKLTGIYNFTNPGAISHNQILALYKKHVDPSYTWENFTIDEQNKILAAKRSNNELDTTKFCAALPDVHIPDIHEACEKVFQRMKVNLEAEGIWPDKLPK 300
            K LI+G K GWIGGK+  L +  G  V  A +R+ENRE++ AELD ++P+HVL +AG+TGRPNIDWCE H+ ETIRTNVIGTLN+A+ C+ +GIH T+YATGCI+ YD  HP+G G GFTEED PNF GSFYS+TK+Y+E +LK Y    ILRVRMPISDDL+SR+FVTKI KY+KVVN+PNSMTVLT+LLP SL MA + LTGIYNFTNPG ISHNQ+L LYKK++DP + + NFTI+EQN+IL A RSNNELDTTK       + I DI  A +  FQRMK NLEAEGI PD LPK
Sbjct:    3 KVLIYGGKTGWIGGKMYTLCKEHGIEVYNADSRIENREAVAAELDRIQPSHVLMSAGITGRPNIDWCEDHRPETIRTNVIGTLNVADLCNERGIHCTVYATGCIYTYDAAHPLGSGIGFTEEDKPNFTGSFYSETKSYVEPLLKQYPTCMILRVRMPISDDLSSRSFVTKIAKYEKVVNIPNSMTVLTELLPASLKMAQKGLTGIYNFTNPGVISHNQVLDLYKKYIDPDFQYSNFTIEEQNEILKAPRSNNELDTTKLLRDTEGIEINDILTAMDLCFQRMKKNLEAEGILPDNLPK 300          
BLAST of EWM28830.1 vs. NCBI_GenBank
Match: gi|676392711|ref|XP_009039633.1| (hypothetical protein AURANDRAFT_38303 [Aureococcus anophagefferens] >gi|323449910|gb|EGB05795.1| hypothetical protein AURANDRAFT_38303 [Aureococcus anophagefferens])

HSP 1 Score: 400.979 bits (1029), Expect = 2.451e-137
Identity = 190/298 (63.76%), Postives = 234/298 (78.52%), Query Frame = 0
Query:    2 AEEKYLIFGKNGWIGGKLIELLQAQGKTVVLAQTRLENRESLFAELDAVKPTHVLDAAGVTGRPNIDWCETHQVETIRTNVIGTLNLAEACHLKGIHMTLYATGCIFEYDEKHPIGG---PGFTEEDSPNFFGSFYSKTKAYMEDMLKSY-NNVCILRVRMPISDDLNSRNFVTKIVKYDKVVNVPNSMTVLTDLLPISLLMAARKLTGIYNFTNPGAISHNQILALYKKHVDPSYTWENFTIDEQNKILAAKRSNNELDTTKFCAALPDVHIPDIHEACEKVFQRMKVNLEAEGIWP 295
             + K+L++GKNGWIGG LIEL +A G  VVL   RLENRE++ AE++ V+PT VL+AAGVTGRPN+DWCE ++   IRTNVIG LNLA+ C  K +H TLYATGCIFEYD  HP+GG     FTEED  NF GS+YS TK ++E+ML++Y +++ +LRVRMPISDDL+ RNF+TKI KY+KVV++PNSMTVL DLLP SL ++ R+L GIYNF NPGAISHNQ L  YKK+VDP +TW NFT++EQNKILAAKRSNNELD +K   ALPD+ IPDIH A  +  QR K NL+A+G  P
Sbjct:   29 GKHKFLLYGKNGWIGGMLIELARANGDEVVLGDARLENREAVLAEIEKVRPTRVLNAAGVTGRPNVDWCEFNKQTVIRTNVIGCLNLADICWQKKLHCTLYATGCIFEYDAAHPLGGGVETAFTEEDRANFDGSYYSMTKGFVEEMLRAYLDHLTVLRVRMPISDDLSPRNFITKISKYEKVVDIPNSMTVLHDLLPCSLELSRRELAGIYNFCNPGAISHNQCLEQYKKYVDPDFTWSNFTVEEQNKILAAKRSNNELDCSKLVNALPDMRIPDIHTAMAECMQRTKKNLDAQGWKP 326          
BLAST of EWM28830.1 vs. NCBI_GenBank
Match: gi|1072228199|gb|OEU12937.1| (putative bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 399.438 bits (1025), Expect = 5.550e-137
Identity = 196/309 (63.43%), Postives = 244/309 (78.96%), Query Frame = 0
Query:    4 EKYLIFG-KNGWIGGKLIELLQAQ--GKTVVLAQTRLENRESLFAELDAVKPTHVLDAAGVTGRPNIDWCETHQVETIRTNVIGTLNLAEACHLKGIHMTLYATGCIFEYDEKHPIG-GPGFTEEDSPNFFGSFYSKTKAYMEDMLKSYNNVCILRVRMPISDDLNSRNFVTKIVKYDKVVNVPNSMTVLTDLLPISLLMAARKLTGIYNFTNPGAISHNQILALYKKHVDPSYTWENFTIDEQNKILAAKRSNNELDTTKFCAALPD-VHIPDIHEACEKVFQRMKVNLEAE--GIWPDKLPKRTNRL 305
            ++ L+FG K GWIG  + EL++ +  G  V  A +R++NRE++ AELD +KPTHV +AAG+TGRPNIDWCETH+ ETIRTNVIGTLNLA+ C  + IH T+YATGCIF YDEKHP G G GF+EED+PNF GSFYS+TK YME MLK Y+N  ILRVRMPISDDL  R+FVTKI+KY++VVN+PNSMT+LT++LP SL MA + LTG+YNFTNPG ISHN++L LY K +DP+YT+ NFT++EQ+KILAA RSNNELDTTK    +PD + I +I +A E  F+RMK+NLE E  G  PD LPK   R+
Sbjct:   11 KRVLVFGGKTGWIGNLMCELMEGEEKGVEVFRANSRIQNREAVAAELDEIKPTHVFNAAGITGRPNIDWCETHKPETIRTNVIGTLNLADLCLDRNIHCTVYATGCIFAYDEKHPEGSGIGFSEEDTPNFDGSFYSQTKGYMEPMLKEYSNCLILRVRMPISDDLIHRSFVTKILKYERVVNIPNSMTILTEMLPASLAMAKKGLTGVYNFTNPGVISHNEVLDLYTKIIDPTYTYNNFTLEEQSKILAAARSNNELDTTKLLRDMPDGIEINEIKKAYELCFERMKINLEKEHGGPVPDCLPKEFRRI 319          
BLAST of EWM28830.1 vs. NCBI_GenBank
Match: gi|224001324|ref|XP_002290334.1| (hypothetical protein THAPSDRAFT_40788 [Thalassiosira pseudonana CCMP1335] >gi|220973756|gb|EED92086.1| hypothetical protein THAPSDRAFT_40788 [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 391.734 bits (1005), Expect = 5.300e-134
Identity = 195/306 (63.73%), Postives = 235/306 (76.80%), Query Frame = 0
Query:    5 KYLIFG-KNGWIGGKLIELLQAQ--GKTVVLAQTRLENRESLFAELDAVKPTHVLDAAGVTGRPNIDWCETHQVETIRTNVIGTLNLAEACHLKGIHMTLYATGCIFEYDEKHPIG-GPGFTEEDSPNFFGSFYSKTKAYMEDMLKSYNNVCILRVRMPISDDLNSRNFVTKIVKYDKVVNVPNSMTVLTDLLPISLLMAARKLTGIYNFTNPGAISHNQILALYKKHVDPSYTWENFTIDEQNKILAAKRSNNELDTTKFCAALP-DVHIPDIHEACEKVFQRMKVNLEAE-GIWPDKLPKRTNR 304
            K LI+G K GWIGGK+  L+ A+    TVVLA  R+ENR  + AELD  KP+HV  AAG+TGRPNIDWCE H+ ETIRTNVIGTLNLA+ C+ +GIH T+YATGCIF+YD+ HP+G G GFTEED PNF  SFYS+TK YME MLK Y +  ILRVRMPISDDL+ RNF+TKIVKY++VVN+PNSMTVLT++LP SL MA + LTG+YNF NPG ISHN+ L LY K++DP+YT++NFT++EQ+KIL A RSNNELD TK    LP D+ + DI  A E   QRM+VNL  E G  PD LPK   +
Sbjct:   10 KALIYGGKTGWIGGKMAALIAAKHPSVTVVLASARIENRADVAAELDDEKPSHVFMAAGITGRPNIDWCEDHKPETIRTNVIGTLNLADLCNDRGIHCTVYATGCIFKYDDAHPLGSGIGFTEEDKPNFDESFYSQTKGYMEPMLKCYPSCMILRVRMPISDDLSHRNFITKIVKYERVVNIPNSMTVLTEMLPASLAMATKGLTGVYNFCNPGVISHNECLDLYTKYIDPTYTYKNFTLEEQSKILKAGRSNNELDATKLLRDLPEDIKLNDIKTAVELCMQRMRVNLTEEFGELPDALPKEVRK 315          
BLAST of EWM28830.1 vs. NCBI_GenBank
Match: gi|219127859|ref|XP_002184144.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217404375|gb|EEC44322.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 390.193 bits (1001), Expect = 2.719e-133
Identity = 190/296 (64.19%), Postives = 233/296 (78.72%), Query Frame = 0
Query:    7 LIFGK-NGWIGGKLIELLQAQGKTVVLAQTRLENRESLFAELDAVKPTHVLDAAGVTGRPNIDWCETHQVETIRTNVIGTLNLAEACHLKGIHMTLYATGCIFEYDEKHPIG-GPGFTEEDSPNFFGSFYSKTKAYMEDMLKSYNNVCILRVRMPISDDLNSRNFVTKIVKYDKVVNVPNSMTVLTDLLPISLLMAARKLTGIYNFTNPGAISHNQILALYKKHVDPSYTWENFTIDEQNKILAAKRSNNELDTTKFCAALPD-VHIPDIHEACEKVFQRMKVNLEAEGIWPDKLP 299
            LIFG   GWIG  + +L Q +G  V  A++R+ENR  + AELD +KP+HVL +AG+TGRPNIDWCE H+ ET+R NVIGTLN+A+ C+ +GIH T+YATGCIF+YD+ HP+G G GFTEED PNF GSFYSKTK +ME MLK Y N  ILRVRMP+SDDL  RNFVTKI KY+KVV+VPNSMT+L ++LP SL MA + LTG+YNFTNPG ISHNQ+L L+KK++DP++T+ NF+++EQ KIL A RSNNELDTTK    +P+ V I DI  A +K FQRMKVNLEA G  PD LP
Sbjct:    5 LIFGGITGWIGQMMNQLCQDKGIAVHNAESRIENRGDVEAELDRIKPSHVLMSAGITGRPNIDWCEDHKPETMRVNVIGTLNVADVCYTRGIHCTVYATGCIFKYDDAHPLGSGIGFTEEDVPNFDGSFYSKTKGFMEPMLKEYPNCLILRVRMPVSDDLFHRNFVTKIAKYEKVVDVPNSMTILHEMLPASLAMAQKGLTGVYNFTNPGVISHNQVLDLFKKYIDPNFTYSNFSVEEQAKILKAARSNNELDTTKLMRDVPEGVEINDILTAFDKCFQRMKVNLEAMGWLPDNLP 300          
BLAST of EWM28830.1 vs. NCBI_GenBank
Match: gi|154322248|ref|XP_001560439.1| (conserved hypothetical protein [Botrytis cinerea B05.10] >gi|335347094|gb|AEH41996.1| UDP-4-keto-6-deoxyglucose-3,5-epimerase/-4-reductase [Botrytis cinerea] >gi|347833324|emb|CCD49021.1| similar to NRS/ER (NUCLEOTIDE-RHAMNOSE SYNTHASE/EPIMERASE-REDUCTASE); UDP-4-keto-6-deoxy-glucose-3,5-epimerase/ UDP-4-keto-rhamnose-4-keto-reductase/ dTDP-4-dehydrorhamnose 3,5-epimerase/ dTDP-4-dehydrorhamnose reductase [Botrytis cinerea T4] >gi|472243858|gb|EMR88497.1| putative nad dependent epimerase dehydratase protein [Botrytis cinerea BcDW1])

HSP 1 Score: 384.03 bits (985), Expect = 2.544e-131
Identity = 173/285 (60.70%), Postives = 231/285 (81.05%), Query Frame = 0
Query:    2 AEEKYLIFGKNGWIGGKLIELLQAQGKTVVLAQTRLENRESLFAELDAVKPTHVLDAAGVTGRPNIDWCETHQVETIRTNVIGTLNLAEACHLKGIHMTLYATGCIFEYDEKHPIGGPGFTEEDSPNFFGSFYSKTKAYMEDMLKSYNNVCILRVRMPISDDLNSRNFVTKIVKYDKVVNVPNSMTVLTDLLPISLLMAARKLTGIYNFTNPGAISHNQILALYKKHVDPSYTWENFTIDEQNKILAAKRSNNELDTTKFCAALPD--VHIPDIHEACEKVFQRM 284
            +  ++LI+G  GW+ G L  LL++QGK V     R++NRES+ AE++ VKPTHVL+ AG TGRPN+DWCE ++ ETIR+NVIGTLNL + C+LKGIH+T++ATGCI+ Y+++HPIGGPGF E D  NF GSFYS+TKA++E+++K+YNN  ILR+RMP+SDDL+SRNFVTKI KYD+VV++PNS T+L DLLP S+LMA  K TGIYNFTNPGAISHN++LAL+K++V P +TW+NFT++EQ+K++ A RSN +LDTTK    L +    +P+IHEA +  FQRM
Sbjct:    3 SSNRFLIWGGEGWVAGHLKTLLESQGKEVYTTTVRMQNRESVIAEIEKVKPTHVLNCAGCTGRPNVDWCEDNKEETIRSNVIGTLNLTDVCYLKGIHITVFATGCIYTYNDEHPIGGPGFLETDPANFAGSFYSETKAHVEEVMKTYNNTLILRLRMPVSDDLHSRNFVTKIAKYDRVVDIPNSNTILHDLLPASILMAEHKDTGIYNFTNPGAISHNEVLALFKEYVRPDFTWKNFTLEEQSKVIKAGRSNCKLDTTKLVKKLSEYGYEVPEIHEAYKGCFQRM 287          
BLAST of EWM28830.1 vs. NCBI_GenBank
Match: gi|551646863|ref|XP_005826217.1| (hypothetical protein GUITHDRAFT_89166 [Guillardia theta CCMP2712] >gi|428170311|gb|EKX39237.1| hypothetical protein GUITHDRAFT_89166 [Guillardia theta CCMP2712])

HSP 1 Score: 384.415 bits (986), Expect = 4.039e-131
Identity = 185/302 (61.26%), Postives = 233/302 (77.15%), Query Frame = 0
Query:    2 AEEKYLIFGKNGWIGGKLIELLQAQGKTVVLAQTRLENRESLFAELDAVKPTHVLDAAGVTGRPNIDWCETHQVETIRTNVIGTLNLAEACHLKGIHMTLYATGCIFEYDEKHPIGGPGFTEEDSPNFFGSFYSKTKAYMEDMLKSYNNVCILRVRMPISDDLNSRNFVTKIVKYDKVVNVPNSMTVLTDLLPISLLMAARKLTGIYNFTNPGAISHNQILALYKKHVDPSYTWENFTIDEQNKILAAKRSNNELDTTKF-CAALPDVH-IPDIHEACEKVFQRMKVNLEAEGIWPDKLPKR 301
            + E YL++G  GWIGG L  LL+  GK VV+A+ RL+NRE +  ELD  +PT VL AAG+TGRPN+DWCET++  T+RTNVIGTL + +AC  +GIH TL+ATGCI+EYD+ HPIGG GFTEED PN+ GSFYSKTKA +E++LK Y+NV ILR+RMPISDDL+ R+FVTKI KY KVV++PNSMTVL +LLP+SL M+  KLTGIYNF NPGAISHN++L +YK+ VDP++ W NFT++EQ KIL A RSNN L+T K    A+   H IPDI  A  +  ++ K  L AEG +PD LPK+
Sbjct:    3 SNEVYLLWGSTGWIGGILQGLLRDGGKKVVVAKARLQNREEVEKELDEHQPTRVLIAAGITGRPNVDWCETNKEATVRTNVIGTLGIVDACWQRGIHATLFATGCIYEYDKDHPIGGRGFTEEDRPNYDGSFYSKTKAIVEELLKVYSNVLILRLRMPISDDLSERSFVTKIAKYHKVVDIPNSMTVLNELLPLSLSMSEAKLTGIYNFCNPGAISHNEVLQIYKEEVDPNFEWSNFTVEEQAKILGAGRSNNFLETKKLEDEAIKLGHSIPDIKTAVRQALRKAKAKLVAEGRFPDGLPKK 304          
The following BLAST results are available for this feature:
BLAST of EWM28830.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111254|gb|EWM28830.1|0.000e+0100.00epimerase 4-reductase [Nannochloropsis gaditana][more]
gi|299472397|emb|CBN77585.1|8.743e-15667.88conserved unknown protein [Ectocarpus siliculosus][more]
gi|1210514775|dbj|GAX26254.1|1.111e-14066.113,5-epimerase/4-reductase [Fistulifera solaris][more]
gi|1210511660|dbj|GAX29474.1|5.577e-13965.773,5-epimerase/4-reductase [Fistulifera solaris][more]
gi|676392711|ref|XP_009039633.1|2.451e-13763.76hypothetical protein AURANDRAFT_38303 [Aureococcus... [more]
gi|1072228199|gb|OEU12937.1|5.550e-13763.43putative bifunctional dTDP-4-dehydrorhamnose 3,5-e... [more]
gi|224001324|ref|XP_002290334.1|5.300e-13463.73hypothetical protein THAPSDRAFT_40788 [Thalassiosi... [more]
gi|219127859|ref|XP_002184144.1|2.719e-13364.19predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|154322248|ref|XP_001560439.1|2.544e-13160.70conserved hypothetical protein [Botrytis cinerea B... [more]
gi|551646863|ref|XP_005826217.1|4.039e-13161.26hypothetical protein GUITHDRAFT_89166 [Guillardia ... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1844rna1844Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications