EWM28832.1, cds1835 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28832.1 vs. NCBI_GenBank
Match: gi|585111255|gb|EWM28831.1| (protein phosphatase 2c [Nannochloropsis gaditana] >gi|585111256|gb|EWM28832.1| protein phosphatase 2c [Nannochloropsis gaditana]) HSP 1 Score: 770 bits (1987), Expect = 0.000e+0 Identity = 376/376 (100.00%), Postives = 376/376 (100.00%), Query Frame = 0
Query: 1 MGAHQGSPSLSASTIPDAPSLPFGSHVLGLLLCFAILYVALRILFTLVHSLFLRSNPAMPGAPTVPRLSGGWRSWYLAGACGAKASPLSSTAGHPVPYSSSPTDVERQPNQVHLPCSHWAETGGRQYMEDRLSFRGRLGGREDASLYACFDGHGGALASEFCAQELPGYLVESEKNWEMATKSALKDAFAQTDAAFAQALAGTDRLDGTTALVSVVVGDKLFVANAGDSRAILVQRGARVVPLSRDHKPSLPDELERITGLGGKVIFWGRWRVEGVLAVSRAIGDAHLKPYVTPEPEVTEWEITEKDHFLVVASDGLWDVLSNEMAAQIVTNHGQNLEQAAKRLCREASMNGSMDNISAIVVDLREVRRRRRDRER 376
MGAHQGSPSLSASTIPDAPSLPFGSHVLGLLLCFAILYVALRILFTLVHSLFLRSNPAMPGAPTVPRLSGGWRSWYLAGACGAKASPLSSTAGHPVPYSSSPTDVERQPNQVHLPCSHWAETGGRQYMEDRLSFRGRLGGREDASLYACFDGHGGALASEFCAQELPGYLVESEKNWEMATKSALKDAFAQTDAAFAQALAGTDRLDGTTALVSVVVGDKLFVANAGDSRAILVQRGARVVPLSRDHKPSLPDELERITGLGGKVIFWGRWRVEGVLAVSRAIGDAHLKPYVTPEPEVTEWEITEKDHFLVVASDGLWDVLSNEMAAQIVTNHGQNLEQAAKRLCREASMNGSMDNISAIVVDLREVRRRRRDRER
Sbjct: 1 MGAHQGSPSLSASTIPDAPSLPFGSHVLGLLLCFAILYVALRILFTLVHSLFLRSNPAMPGAPTVPRLSGGWRSWYLAGACGAKASPLSSTAGHPVPYSSSPTDVERQPNQVHLPCSHWAETGGRQYMEDRLSFRGRLGGREDASLYACFDGHGGALASEFCAQELPGYLVESEKNWEMATKSALKDAFAQTDAAFAQALAGTDRLDGTTALVSVVVGDKLFVANAGDSRAILVQRGARVVPLSRDHKPSLPDELERITGLGGKVIFWGRWRVEGVLAVSRAIGDAHLKPYVTPEPEVTEWEITEKDHFLVVASDGLWDVLSNEMAAQIVTNHGQNLEQAAKRLCREASMNGSMDNISAIVVDLREVRRRRRDRER 376
BLAST of EWM28832.1 vs. NCBI_GenBank
Match: gi|1173958519|gb|OQS04866.1| (phosphatase 2C [Thraustotheca clavata]) HSP 1 Score: 243.432 bits (620), Expect = 2.378e-74 Identity = 127/271 (46.86%), Postives = 174/271 (64.21%), Query Frame = 0
Query: 95 PVPYSSSPTDVERQPNQVHLPCSHWAETGGRQYMEDRLSFRGRLGGREDASLYACFDGHGGALASEFCAQELPGYLVESEKNWEMATKSALKDAFAQTDAAFAQALAGTDRLDGTTALVSVVVGDKLFVANAGDSRAILVQRGARVVPLSRDHKPSLPDELERITGLGGKVIFWGRWRVEGVLAVSRAIGDAHLKPYVTPEPEVTEWEITEKDHFLVVASDGLWDVLSNEMAAQIVTNHGQNLEQAAKRLCREASMNGSMDNISAIVVDLR 365
P P S +P R + V+ P G R YMEDR + G L G +AS Y FDGHGG ASE+CA+ L +++ + ++ K AL F +TDA + Q +R DGTTA+ + G+ ++VAN GDSRAILV++ VV LS DHKP+ DE ER+T +GG VIFWG WRVEG+LAVSRAIGD LKPYV EPE+T+ E ++ D F+++ASDG+WDVL N+ A++ ++++ A+K + A GS+DNI A+V+DLR
Sbjct: 32 PRPESEAPAKKTRDTSVVY-PYGVAEMQGKRPYMEDRFTAVGTLNGDPNASFYGVFDGHGGDGASEYCAEMLCDNIMQ-DPMYQQYPKEALTKGFLRTDAEYVQYANRRNRDDGTTAVTVLAKGNTIYVANVGDSRAILVKKNGEVVALSTDHKPNRADERERVTNMGGHVIFWGVWRVEGILAVSRAIGDRMLKPYVIAEPEITQHERSDDDAFIILASDGVWDVLPNDEVARLAL-QAESVQLASKTIMEYAYQRGSLDNICAMVIDLR 299
BLAST of EWM28832.1 vs. NCBI_GenBank
Match: gi|1173937282|gb|OQR88114.1| (protein phosphatase 2C [Achlya hypogyna]) HSP 1 Score: 242.276 bits (617), Expect = 1.042e-73 Identity = 126/243 (51.85%), Postives = 159/243 (65.43%), Query Frame = 0
Query: 123 GGRQYMEDRLSFRGRLGGREDASLYACFDGHGGALASEFCAQELPGYLVESEKNWEMATKSALKDAFAQTDAAFAQALAGTDRLDGTTALVSVVVGDKLFVANAGDSRAILVQRGARVVPLSRDHKPSLPDELERITGLGGKVIFWGRWRVEGVLAVSRAIGDAHLKPYVTPEPEVTEWEITEKDHFLVVASDGLWDVLSNEMAAQIVTNHGQNLEQAAKRLCREASMNGSMDNISAIVVDLR 365
G R YMEDR G L G+ DAS Y FDGHGG ASE+CA+ L + + + + K AL F +TD + Q +R DGTTA+ + G+ L+VAN GDSRAILV++ V LS DHKP+ PDE ER+T +GG VIFWG WRVEG+LAVSRAIGD LKPYV EPE+T+ E T D FLV+ASDG+WDVLSN A++V ++ AAK + A GS+DNI A+V+DL+
Sbjct: 68 GKRPYMEDRYVASGTLNGKADASFYGVFDGHGGDGASEYCAEMLCANVTQ-DPMYTQYPKEALTKGFLRTDEDYTQLANRRNRDDGTTAVTVLAQGNTLYVANVGDSRAILVKKDGEAVALSTDHKPNRPDERERVTNMGGHVIFWGVWRVEGILAVSRAIGDRMLKPYVIAEPEITQHERTADDAFLVLASDGVWDVLSNAEVARLVL-QADSIHLAAKTVMEYAYQRGSLDNICAMVIDLQ 308
BLAST of EWM28832.1 vs. NCBI_GenBank
Match: gi|970627867|gb|KUF75676.1| (protein phosphatase 2C 7 [Phytophthora nicotianae]) HSP 1 Score: 233.032 bits (593), Expect = 8.295e-71 Identity = 119/244 (48.77%), Postives = 162/244 (66.39%), Query Frame = 0
Query: 123 GGRQYMEDRLSFRGRLGGREDASLYACFDGHGGALASEFCAQELPGYLVESEKNWEMATKSALKDAFAQTDAAFAQALAGTDRLDGTTALVSVVVGDKLFVANAGDSRAILVQRGARVVPLSRDHKPSLPDELERITGLGGKVIFWGRWRVEGVLAVSRAIGDAHLKPYVTPEPEVTEWEITEKDHFLVVASDGLWDVLSNEMAAQIVTNHGQNLEQAAKRLCREASMNGSMDNISAIVVDLRE 366
G R YMEDR + L G S Y FDGHGG A+ +C Q + ++ E + +ALK+ F +TD + Q + DGTTA+V + G+++FVA+ GDSRA+LV R +V L+ DHKP+ PDE RI LGG V+FWG WRVEG+LAVSRAIGD LKP+V EPEV ++ TE+D ++V+ASDG+WD +SN+ AAQ+V + ++ + AA+R+ EA GSMDNI A+V+DLRE
Sbjct: 60 GRRPYMEDRHTAMADLNGDPKQSFYGIFDGHGGDGAANYCVQAMCQNVIR-EPSITKEPAAALKNGFLRTDQEYLQIANRKNSEDGTTAVVVLTQGNEIFVAHTGDSRAVLVHRSGKVSVLTSDHKPNRPDERRRIQELGGSVVFWGVWRVEGILAVSRAIGDRMLKPFVVAEPEVKQFTRTEEDRYVVLASDGVWDTVSNDDAAQLVLKY-EDPQTAAQRIMEEAYARGSMDNICAMVIDLRE 301
BLAST of EWM28832.1 vs. NCBI_GenBank
Match: gi|566008320|gb|ETI31231.1| (hypothetical protein, variant 1 [Phytophthora parasitica P1569] >gi|567945834|gb|ETK71645.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|567974516|gb|ETL25107.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568003960|gb|ETL78297.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568033866|gb|ETM31558.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|570312015|gb|ETO59963.1| hypothetical protein, variant 1 [Phytophthora parasitica P1976] >gi|570935805|gb|ETP01062.1| hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 233.417 bits (594), Expect = 8.471e-71 Identity = 119/244 (48.77%), Postives = 162/244 (66.39%), Query Frame = 0
Query: 123 GGRQYMEDRLSFRGRLGGREDASLYACFDGHGGALASEFCAQELPGYLVESEKNWEMATKSALKDAFAQTDAAFAQALAGTDRLDGTTALVSVVVGDKLFVANAGDSRAILVQRGARVVPLSRDHKPSLPDELERITGLGGKVIFWGRWRVEGVLAVSRAIGDAHLKPYVTPEPEVTEWEITEKDHFLVVASDGLWDVLSNEMAAQIVTNHGQNLEQAAKRLCREASMNGSMDNISAIVVDLRE 366
G R YMEDR + L G S Y FDGHGG A+ +C Q + ++ E + +ALK+ F +TD + Q + DGTTA+V + G+++FVA+ GDSRA+LV R +V L+ DHKP+ PDE RI LGG V+FWG WRVEG+LAVSRAIGD LKP+V EPEV ++ TE+D ++V+ASDG+WD +SN+ AAQ+V + ++ + AA+R+ EA GSMDNI A+V+DLRE
Sbjct: 72 GRRPYMEDRHTAMADLNGDPKQSFYGIFDGHGGDGAANYCVQAMCQNVIR-EPSITKEPAAALKNGFLRTDQEYLQIANRKNSEDGTTAVVVLTQGNEIFVAHTGDSRAVLVHRSGKVSVLTSDHKPNRPDERRRIQELGGSVVFWGVWRVEGILAVSRAIGDRMLKPFVVAEPEVKQFTRTEEDRYVVLASDGVWDTVSNDDAAQLVLKY-EDPQTAAQRIMEEAYARGSMDNICAMVIDLRE 313
BLAST of EWM28832.1 vs. NCBI_GenBank
Match: gi|675179433|ref|XP_008898601.1| (hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >gi|568101570|gb|ETN16256.1| hypothetical protein, variant 1 [Phytophthora parasitica INRA-310]) HSP 1 Score: 233.417 bits (594), Expect = 8.656e-71 Identity = 119/244 (48.77%), Postives = 162/244 (66.39%), Query Frame = 0
Query: 123 GGRQYMEDRLSFRGRLGGREDASLYACFDGHGGALASEFCAQELPGYLVESEKNWEMATKSALKDAFAQTDAAFAQALAGTDRLDGTTALVSVVVGDKLFVANAGDSRAILVQRGARVVPLSRDHKPSLPDELERITGLGGKVIFWGRWRVEGVLAVSRAIGDAHLKPYVTPEPEVTEWEITEKDHFLVVASDGLWDVLSNEMAAQIVTNHGQNLEQAAKRLCREASMNGSMDNISAIVVDLRE 366
G R YMEDR + L G S Y FDGHGG A+ +C Q + ++ E + +ALK+ F +TD + Q + DGTTA+V + G+++FVA+ GDSRA+LV R +V L+ DHKP+ PDE RI LGG V+FWG WRVEG+LAVSRAIGD LKP+V EPEV ++ TE+D ++V+ASDG+WD +SN+ AAQ+V + ++ + AA+R+ EA GSMDNI A+V+DLRE
Sbjct: 72 GRRPYMEDRHTAMADLNGDPKQSFYGIFDGHGGDGAANYCVQAMCQNVIR-EPSITKEPAAALKNGFLRTDQEYLQIANRKNSEDGTTAVVVLTQGNEIFVAHTGDSRAVLVHRSGKVSVLTSDHKPNRPDERRRIQELGGSVVFWGVWRVEGILAVSRAIGDRMLKPFVVAEPEVKQFTRTEEDRYVVLASDGVWDTVSNDDAAQLVLKY-EDPQTAAQRIMEEAYARGSMDNICAMVIDLRE 313
BLAST of EWM28832.1 vs. NCBI_GenBank
Match: gi|675179435|ref|XP_008898602.1| (hypothetical protein PPTG_06434 [Phytophthora parasitica INRA-310] >gi|568101569|gb|ETN16255.1| hypothetical protein PPTG_06434 [Phytophthora parasitica INRA-310]) HSP 1 Score: 233.417 bits (594), Expect = 1.236e-70 Identity = 119/244 (48.77%), Postives = 162/244 (66.39%), Query Frame = 0
Query: 123 GGRQYMEDRLSFRGRLGGREDASLYACFDGHGGALASEFCAQELPGYLVESEKNWEMATKSALKDAFAQTDAAFAQALAGTDRLDGTTALVSVVVGDKLFVANAGDSRAILVQRGARVVPLSRDHKPSLPDELERITGLGGKVIFWGRWRVEGVLAVSRAIGDAHLKPYVTPEPEVTEWEITEKDHFLVVASDGLWDVLSNEMAAQIVTNHGQNLEQAAKRLCREASMNGSMDNISAIVVDLRE 366
G R YMEDR + L G S Y FDGHGG A+ +C Q + ++ E + +ALK+ F +TD + Q + DGTTA+V + G+++FVA+ GDSRA+LV R +V L+ DHKP+ PDE RI LGG V+FWG WRVEG+LAVSRAIGD LKP+V EPEV ++ TE+D ++V+ASDG+WD +SN+ AAQ+V + ++ + AA+R+ EA GSMDNI A+V+DLRE
Sbjct: 72 GRRPYMEDRHTAMADLNGDPKQSFYGIFDGHGGDGAANYCVQAMCQNVIR-EPSITKEPAAALKNGFLRTDQEYLQIANRKNSEDGTTAVVVLTQGNEIFVAHTGDSRAVLVHRSGKVSVLTSDHKPNRPDERRRIQELGGSVVFWGVWRVEGILAVSRAIGDRMLKPFVVAEPEVKQFTRTEEDRYVVLASDGVWDTVSNDDAAQLVLKY-EDPQTAAQRIMEEAYARGSMDNICAMVIDLRE 313
BLAST of EWM28832.1 vs. NCBI_GenBank
Match: gi|566008319|gb|ETI31230.1| (hypothetical protein F443_21720 [Phytophthora parasitica P1569] >gi|567945833|gb|ETK71644.1| hypothetical protein L915_21120 [Phytophthora parasitica] >gi|567974515|gb|ETL25106.1| hypothetical protein L916_20996 [Phytophthora parasitica] >gi|568003959|gb|ETL78296.1| hypothetical protein L917_20853 [Phytophthora parasitica] >gi|568033865|gb|ETM31557.1| hypothetical protein L914_20866 [Phytophthora parasitica] >gi|570312014|gb|ETO59962.1| hypothetical protein F444_21749 [Phytophthora parasitica P1976] >gi|570935804|gb|ETP01061.1| hypothetical protein F441_21607 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 233.032 bits (593), Expect = 1.304e-70 Identity = 119/244 (48.77%), Postives = 162/244 (66.39%), Query Frame = 0
Query: 123 GGRQYMEDRLSFRGRLGGREDASLYACFDGHGGALASEFCAQELPGYLVESEKNWEMATKSALKDAFAQTDAAFAQALAGTDRLDGTTALVSVVVGDKLFVANAGDSRAILVQRGARVVPLSRDHKPSLPDELERITGLGGKVIFWGRWRVEGVLAVSRAIGDAHLKPYVTPEPEVTEWEITEKDHFLVVASDGLWDVLSNEMAAQIVTNHGQNLEQAAKRLCREASMNGSMDNISAIVVDLRE 366
G R YMEDR + L G S Y FDGHGG A+ +C Q + ++ E + +ALK+ F +TD + Q + DGTTA+V + G+++FVA+ GDSRA+LV R +V L+ DHKP+ PDE RI LGG V+FWG WRVEG+LAVSRAIGD LKP+V EPEV ++ TE+D ++V+ASDG+WD +SN+ AAQ+V + ++ + AA+R+ EA GSMDNI A+V+DLRE
Sbjct: 72 GRRPYMEDRHTAMADLNGDPKQSFYGIFDGHGGDGAANYCVQAMCQNVIR-EPSITKEPAAALKNGFLRTDQEYLQIANRKNSEDGTTAVVVLTQGNEIFVAHTGDSRAVLVHRSGKVSVLTSDHKPNRPDERRRIQELGGSVVFWGVWRVEGILAVSRAIGDRMLKPFVVAEPEVKQFTRTEEDRYVVLASDGVWDTVSNDDAAQLVLKY-EDPQTAAQRIMEEAYARGSMDNICAMVIDLRE 313
BLAST of EWM28832.1 vs. NCBI_GenBank
Match: gi|570966088|gb|ETP29207.1| (hypothetical protein, variant 1 [Phytophthora parasitica P10297]) HSP 1 Score: 232.646 bits (592), Expect = 1.376e-70 Identity = 119/244 (48.77%), Postives = 162/244 (66.39%), Query Frame = 0
Query: 123 GGRQYMEDRLSFRGRLGGREDASLYACFDGHGGALASEFCAQELPGYLVESEKNWEMATKSALKDAFAQTDAAFAQALAGTDRLDGTTALVSVVVGDKLFVANAGDSRAILVQRGARVVPLSRDHKPSLPDELERITGLGGKVIFWGRWRVEGVLAVSRAIGDAHLKPYVTPEPEVTEWEITEKDHFLVVASDGLWDVLSNEMAAQIVTNHGQNLEQAAKRLCREASMNGSMDNISAIVVDLRE 366
G R YMEDR + L G S Y FDGHGG A+ +C Q + ++ E + +ALK+ F +TD + Q + DGTTA+V + G+++FVA+ GDSRA+LV R +V L+ DHKP+ PDE RI LGG V+FWG WRVEG+LAVSRAIGD LKP+V EPEV ++ TE+D ++V+ASDG+WD +SN+ AAQ+V + ++ + AA+R+ EA GSMDNI A+V+DLRE
Sbjct: 72 GRRPYMEDRHTAMADLNGDPKQSFYGIFDGHGGDGAANYCVQAMCQNVIR-EPSITKEPAAALKNGFLRTDQEYLQIANRKNSEDGTTAVVVLTQGNEIFVAHTGDSRAVLVHRSGKVSVLTSDHKPNRPDERRRIQELGGSVVFWGVWRVEGILAVSRAIGDRMLKPFVVAEPEVKQFTRTEEDRYVVLASDGVWDTVSNDDAAQLVLKY-EDPQPAAQRIMEEAYARGSMDNICAMVIDLRE 313
BLAST of EWM28832.1 vs. NCBI_GenBank
Match: gi|570966087|gb|ETP29206.1| (hypothetical protein F442_21581 [Phytophthora parasitica P10297]) HSP 1 Score: 232.646 bits (592), Expect = 2.212e-70 Identity = 119/244 (48.77%), Postives = 162/244 (66.39%), Query Frame = 0
Query: 123 GGRQYMEDRLSFRGRLGGREDASLYACFDGHGGALASEFCAQELPGYLVESEKNWEMATKSALKDAFAQTDAAFAQALAGTDRLDGTTALVSVVVGDKLFVANAGDSRAILVQRGARVVPLSRDHKPSLPDELERITGLGGKVIFWGRWRVEGVLAVSRAIGDAHLKPYVTPEPEVTEWEITEKDHFLVVASDGLWDVLSNEMAAQIVTNHGQNLEQAAKRLCREASMNGSMDNISAIVVDLRE 366
G R YMEDR + L G S Y FDGHGG A+ +C Q + ++ E + +ALK+ F +TD + Q + DGTTA+V + G+++FVA+ GDSRA+LV R +V L+ DHKP+ PDE RI LGG V+FWG WRVEG+LAVSRAIGD LKP+V EPEV ++ TE+D ++V+ASDG+WD +SN+ AAQ+V + ++ + AA+R+ EA GSMDNI A+V+DLRE
Sbjct: 72 GRRPYMEDRHTAMADLNGDPKQSFYGIFDGHGGDGAANYCVQAMCQNVIR-EPSITKEPAAALKNGFLRTDQEYLQIANRKNSEDGTTAVVVLTQGNEIFVAHTGDSRAVLVHRSGKVSVLTSDHKPNRPDERRRIQELGGSVVFWGVWRVEGILAVSRAIGDRMLKPFVVAEPEVKQFTRTEEDRYVVLASDGVWDTVSNDDAAQLVLKY-EDPQPAAQRIMEEAYARGSMDNICAMVIDLRE 313 The following BLAST results are available for this feature:
BLAST of EWM28832.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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