EWM28836.1, cds1834 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28836.1 vs. NCBI_GenBank
Match: gi|585111260|gb|EWM28836.1| (cdp-diacylglycerol-inositol 3-phosphatidyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 822.387 bits (2123), Expect = 0.000e+0 Identity = 396/396 (100.00%), Postives = 396/396 (100.00%), Query Frame = 0
Query: 1 MPRTSPYRTRGGRVVKSTANVSSGDGSITSTTKPRASSRRATIAGPLASPVTKRSPAPSTPTYESPSTSKKQSSARKSAGGSRSKGSVSKWAVLFYAPNVIGYVRVAVTLYAFYLGVQRKSDWRSVVSLYFLAFALDAVDGYVARMCGQESGFGGVLDMVTDRTATAGLVMLNLVVEGDELRKFGWICLCMLDIGSHWFHCVAAAGAHHKSEEATAGKNAVLRWYYACKPLFFACCLGQEAFYLINYIQRKGGKFGGIAMPSWVPREVEELLPTTVEGWLASITLVFATIKQVVNVVQLASAAVTLAEADAQKKKLKANTTEGQTRRQNVKQHHWKHNPMVYIEAQLMERKRLSNRGNGYLKRLSDRYEGYFLHTGAFIRRIFSIQNSSIKLKITC 396
MPRTSPYRTRGGRVVKSTANVSSGDGSITSTTKPRASSRRATIAGPLASPVTKRSPAPSTPTYESPSTSKKQSSARKSAGGSRSKGSVSKWAVLFYAPNVIGYVRVAVTLYAFYLGVQRKSDWRSVVSLYFLAFALDAVDGYVARMCGQESGFGGVLDMVTDRTATAGLVMLNLVVEGDELRKFGWICLCMLDIGSHWFHCVAAAGAHHKSEEATAGKNAVLRWYYACKPLFFACCLGQEAFYLINYIQRKGGKFGGIAMPSWVPREVEELLPTTVEGWLASITLVFATIKQVVNVVQLASAAVTLAEADAQKKKLKANTTEGQTRRQNVKQHHWKHNPMVYIEAQLMERKRLSNRGNGYLKRLSDRYEGYFLHTGAFIRRIFSIQNSSIKLKITC
Sbjct: 1 MPRTSPYRTRGGRVVKSTANVSSGDGSITSTTKPRASSRRATIAGPLASPVTKRSPAPSTPTYESPSTSKKQSSARKSAGGSRSKGSVSKWAVLFYAPNVIGYVRVAVTLYAFYLGVQRKSDWRSVVSLYFLAFALDAVDGYVARMCGQESGFGGVLDMVTDRTATAGLVMLNLVVEGDELRKFGWICLCMLDIGSHWFHCVAAAGAHHKSEEATAGKNAVLRWYYACKPLFFACCLGQEAFYLINYIQRKGGKFGGIAMPSWVPREVEELLPTTVEGWLASITLVFATIKQVVNVVQLASAAVTLAEADAQKKKLKANTTEGQTRRQNVKQHHWKHNPMVYIEAQLMERKRLSNRGNGYLKRLSDRYEGYFLHTGAFIRRIFSIQNSSIKLKITC 396
BLAST of EWM28836.1 vs. NCBI_GenBank
Match: gi|669168779|ref|XP_008619738.1| (hypothetical protein SDRG_15347 [Saprolegnia diclina VS20] >gi|530728594|gb|EQC26836.1| hypothetical protein SDRG_15347 [Saprolegnia diclina VS20]) HSP 1 Score: 154.836 bits (390), Expect = 1.328e-41 Identity = 92/222 (41.44%), Postives = 125/222 (56.31%), Query Frame = 0
Query: 93 VLFYAPNVIGYVRVAVTLYAFYLGVQRKSDWRSVVSLYFLAFALDAVDGYVARMCGQESGFGGVLDMVTDRTATAGLVMLNLVVEGDELRKFGWICLCMLDIGSHWFHCVAAAGAHHKSEEATAGKNAVLRWYYACKPLFFACCLGQEAFYLINYIQRKGGKFGGIAMPSWVPREVEELLPTTVEGWLASITLVFATIKQVVNVVQLASAAVTLAEADAQKK 314
V FY PN+IGYVRVA+T Y+FY+ ++DW++ + Y +F D DG+ AR Q S FG VLDMVTDR +TAGL L ++ K ++ L +LD SHW+H A+ G HHKS E+ KN +LR YY C PLF CC+G E FY++ Y+ S+ P LP W +K ++NV QLASAA ++AE D ++K
Sbjct: 7 VYFYIPNLIGYVRVALTAYSFYVA---ETDWKTSIICYAFSFICDYFDGFFARWFNQCSTFGAVLDMVTDRCSTAGL--LVILSHLYPAYKLAFLFLLVLDFSSHWYHMYASRG-HHKSIESK--KNVLLRVYYGCYPLFGYCCVGAEFFYILLYVL------------SFEPTLTVAGLPLASIAWYGCFPA--CVMKNIINVAQLASAAASVAEFDYEQK 206
BLAST of EWM28836.1 vs. NCBI_GenBank
Match: gi|299115878|emb|CBN74441.1| (CDP-diacylglycerol---inositol 3-phosphatidyltransferase [Ectocarpus siliculosus]) HSP 1 Score: 153.295 bits (386), Expect = 9.160e-41 Identity = 93/230 (40.43%), Postives = 126/230 (54.78%), Query Frame = 0
Query: 89 SKWAVLFYAPNVIGYVRVAVTLYAFYLGVQRKSDWRSVVSLYFLAFALDAVDGYVARMCGQESGFGGVLDMVTDRTATAGLVM-LNLVVEGDELRKFGWICLCMLDIGSHWFHCVAAAGAHHKSEEATAGKNAVLRWYYACKPLFFACCLGQEAFYLINYI-----QRKGGKFGGIAMPSWVPREVEELLPTTVEGWLASITLVFATIKQVVNVVQLASAAVTLAEADAQ 312
S WAVLFY PN+IGY R+ L ++YL ++W++ Y LAF DAVDG VAR Q S FG VLDMVTDR +TAGL+M L+ + EG F ++ L +D+ SHW H + AG HHK+ + A +N + R +Y C P F CC+G E FY+ Y+ + GG A S LP V KQ VNV QL +A+++LA A+++
Sbjct: 5 SPWAVLFYFPNLIGYARIIAVLASYYLA---DTNWKASFVCYVLAFVGDAVDGAVARYFNQSSKFGAVLDMVTDRCSTAGLLMVLSRLYEGGT-PAFLFLLLMFIDLFSHWMHVQSTAGRHHKAADTLADRNVITRLFYGCYPFFAFCCVGTELFYVALYLLVFVPEASLALGGGGAAVSLHAVCYYVFLPACV-------------CKQAVNVAQLCAASLSLASAESE 217
BLAST of EWM28836.1 vs. NCBI_GenBank
Match: gi|813220283|ref|XP_012211505.1| (hypothetical protein SPRG_16809 [Saprolegnia parasitica CBS 223.65] >gi|641522665|gb|KDO17789.1| hypothetical protein SPRG_16809 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 152.14 bits (383), Expect = 1.536e-40 Identity = 91/222 (40.99%), Postives = 124/222 (55.86%), Query Frame = 0
Query: 93 VLFYAPNVIGYVRVAVTLYAFYLGVQRKSDWRSVVSLYFLAFALDAVDGYVARMCGQESGFGGVLDMVTDRTATAGLVMLNLVVEGDELRKFGWICLCMLDIGSHWFHCVAAAGAHHKSEEATAGKNAVLRWYYACKPLFFACCLGQEAFYLINYIQRKGGKFGGIAMPSWVPREVEELLPTTVEGWLASITLVFATIKQVVNVVQLASAAVTLAEADAQKK 314
V Y PN+IGYVRVA+T Y+FY+ ++DW++ + Y +F D DG+ AR Q S FG VLDMVTDR +TAGL L ++ K ++ L +LD SHW+H A+ G HHKS E+ KN +LR YY C PLF CC+G E FY++ Y+ S+ P LP W +K ++NV QLASAA ++AE D ++K
Sbjct: 7 VYLYIPNLIGYVRVALTAYSFYVA---ETDWKTSIICYAFSFICDYFDGFFARWFNQCSTFGAVLDMVTDRCSTAGL--LVILSHLYPAYKLAFLFLLVLDFSSHWYHMYASRG-HHKSIESK--KNVLLRVYYGCYPLFGYCCVGAEFFYILLYVL------------SFEPTLAVAGLPLASIAWYGCFPA--CVMKNIINVAQLASAAASVAEFDYEQK 206
BLAST of EWM28836.1 vs. NCBI_GenBank
Match: gi|1173950962|gb|OQR98892.1| (phosphatidylinositol synthase (PIS) [Achlya hypogyna]) HSP 1 Score: 146.362 bits (368), Expect = 2.846e-38 Identity = 92/229 (40.17%), Postives = 129/229 (56.33%), Query Frame = 0
Query: 93 VLFYAPNVIGYVRVAVTLYAFYLGVQRKSDWRSVVSLYFLAFALDAVDGYVARMCGQESGFGGVLDMVTDRTATAG-LVMLNLVVEGDELRKFGWICLCMLDIGSHWFHCVAAAGAHHKSEEATAGKNAVLRWYYACKPLFFACCLGQEAFYLINYIQRKGGKFGGIAMPSWVPREVEELLPTTVEGWLASITLVFATIKQVVNVVQLASAAVTLAEADAQKKKLKANT 320
V FY PN+IGY+RV +T Y+FY+ ++DW++ + Y +F D DG+ AR Q S FG VLDMVTDR +TAG LV+L+ + K ++ L +LD SHW+H ++ G HHKS E+ KN +LR YY C PLF CC+G E FY++ Y+ +P L G L + +K ++NV QLASAA ++AE D +K+KA T
Sbjct: 7 VYFYIPNLIGYLRVFLTGYSFYVA---ETDWKTSIICYAFSFICDYFDGFFARWFNQCSTFGAVLDMVTDRCSTAGLLVILSHLYPS---YKLAFLFLLVLDFSSHWYHMYSSRG-HHKSIESK--KNFLLRVYYGCYPLFGYCCVGAEFFYILLYVLSFEPTLAVAGVP---------LSSIAFYGCLPA-----CVMKNIINVAQLASAAASVAEFDFN-EKMKART 211
BLAST of EWM28836.1 vs. NCBI_GenBank
Match: gi|698788532|ref|XP_009827298.1| (hypothetical protein H257_04468 [Aphanomyces astaci] >gi|574118387|gb|ETV83868.1| hypothetical protein H257_04468 [Aphanomyces astaci]) HSP 1 Score: 144.821 bits (364), Expect = 9.338e-38 Identity = 93/230 (40.43%), Postives = 135/230 (58.70%), Query Frame = 0
Query: 90 KWAVLFYAPNVIGYVRVAVTLYAFYLGVQRKSDWRSVVSLYFLAFALDAVDGYVARMCGQESGFGGVLDMVTDRTATAGLVMLNLVVEGDELRKFGWICLCMLDIGSHWFHCVAAAGAHHKSEEATAGKNAVLRWYYACKPLFFACCLGQEAFYLINYIQRKGGKFGGIAMPSWVPREVEELLPTTVEGWLASITLVFATIKQVVNVVQLASAAVTLAEADAQKKKLKAN 319
K V FY PN+IGY RV +T Y+FY+ + SDW++ V Y ++F D DGY AR Q S FG VLDMVTDR +TAGL+++ ++ D F + L +LD SHW+H A+ G HHKS ++ KN +LR YY C PLF CC+G E FY++ Y+ + P+++ V+ +P ++ + + L IK ++NV QL SAA ++AE D +K K +
Sbjct: 3 KEEVYFYIPNLIGYTRVLLTGYSFYVAL---SDWKTAVVCYAISFICDFFDGYFARWFNQCSTFGAVLDMVTDRCSTAGLLVILSHLDKDNTLLFLF--LLVLDFSSHWYHMYASRG-HHKSVDSK--KNFLLRVYYGCYPLFGYCCVGAEFFYILYYVLQHD--------PTYLVPYVD--IPLSIVCYY--VCLPACVIKNIINVAQLCSAAASVAEYDFDQKLQKTS 212
BLAST of EWM28836.1 vs. NCBI_GenBank
Match: gi|1173954882|gb|OQS02016.1| (phosphatidylinositol synthase (PIS) [Thraustotheca clavata]) HSP 1 Score: 140.969 bits (354), Expect = 2.918e-36 Identity = 86/225 (38.22%), Postives = 123/225 (54.67%), Query Frame = 0
Query: 90 KWAVLFYAPNVIGYVRVAVTLYAFYLGVQRKSDWRSVVSLYFLAFALDAVDGYVARMCGQESGFGGVLDMVTDRTATAGLVMLNLVVEGDELRKFGWICLCMLDIGSHWFHCVAAAGAHHKSEEATAGKNAVLRWYYACKPLFFACCLGQEAFYLINYIQRKGGKFGGIAMPSWVPREVEELLPTTVEGWLASITLVFATIKQVVNVVQLASAAVTLAEADAQKK 314
K V Y PN+IGY+RVA+T+Y+FY+ ++DW++ + Y +F D DG+ ARM Q S +G VLDMVTDR +TAGL L ++ K ++ L +LD SHW+H AA G HHK+ ++ KN +LR YY+ PLF CC+G E FY+ Y+ +P L G + +K ++NV QL SAA ++AE D +K
Sbjct: 3 KSEVYVYIPNLIGYLRVALTIYSFYVA---ETDWKTSIVCYAFSFICDYFDGFFARMFNQCSTYGAVLDMVTDRCSTAGL--LVILSHLYPTYKLAFLGLLVLDFSSHWYHMYAARG-HHKNIDSK--KNFLLRVYYSFYPLFGYCCVGAEFFYITLYVLSFEPNLTIFTIP---------LAAIAKYGCFPA-----CVMKNIINVAQLCSAAASVAEFDYDEK 205
BLAST of EWM28836.1 vs. NCBI_GenBank
Match: gi|673046995|ref|XP_008877458.1| (hypothetical protein H310_12242 [Aphanomyces invadans] >gi|574466872|gb|ETV93898.1| hypothetical protein H310_12242 [Aphanomyces invadans]) HSP 1 Score: 139.813 bits (351), Expect = 8.209e-36 Identity = 90/228 (39.47%), Postives = 131/228 (57.46%), Query Frame = 0
Query: 90 KWAVLFYAPNVIGYVRVAVTLYAFYLGVQRKSDWRSVVSLYFLAFALDAVDGYVARMCGQESGFGGVLDMVTDRTATAGLVMLNLVVEGDELRKFGWICLCMLDIGSHWFHCVAAAGAHHKSEEATAGKNAVLRWYYACKPLFFACCLGQEAFYLINYIQRKGGKFGGIAMPSWVPREVEELLPTTVEGWLASITLVFATIKQVVNVVQLASAAVTLAEADAQKKKLK 317
K V FY PN+IGY RV +T Y+ YL + SDW++ V Y ++F D DGY AR Q S FG VLDMVTDR +TAGL++ ++ D+ R ++ L +LD SHW+H A+ G HHK+ + + KN +LR YY C PLF CC+G E FY++ Y+ + +P +P ++ + + L +K ++NV QL SAA ++AE D + K+ K
Sbjct: 3 KEEVYFYIPNLIGYTRVFLTGYSLYLAL---SDWKTAVVCYAISFICDFFDGYFARWFDQCSTFGAVLDMVTDRCSTAGLLV--ILSHLDKDRTLLFLFLLVLDFSSHWYHMYASRG-HHKTVD--SNKNFLLRVYYGCYPLFGYCCVGAEFFYILYYVLLHD---AALVVP-------YANVPLSIVCYF--LCLPACVLKNIINVAQLCSAAASVAEYDFEHKQQK 210
BLAST of EWM28836.1 vs. NCBI_GenBank
Match: gi|1214694815|gb|OWZ08762.1| (CDP-diacylglycerol-inositol 3-phosphatidyltransferase [Phytophthora megakarya]) HSP 1 Score: 137.887 bits (346), Expect = 4.994e-35 Identity = 87/231 (37.66%), Postives = 125/231 (54.11%), Query Frame = 0
Query: 93 VLFYAPNVIGYVRVAVTLYAFYLGVQRKSDWRSVVSLYFLAFALDAVDGYVARMCGQESGFGGVLDMVTDRTATAGLVMLNLVVEGDELRKFGWICLCMLDIGSHWFHCVAAAGAHHKSEEATAGKNAVLRWYYACKPLFFACCLGQEAFYLINYIQRKGGKFGGIAMPSWVPREVEEL-----LPTTVEGWLASITLVFATIKQVVNVVQLASAAVTLAEAD---AQKKK 315
V FY PN+IGY RV ++LY+ + + +D+++ V Y L+F D DG+ AR+C Q S FG VLDMVTDR +TAGL+++ + + F + L +LD SHW+H ++ G HHK A +N +LR+YY C P F CC+G E FY++ Y+ F + +V + +L LP V K V+NV QL SAA ++A D A K K
Sbjct: 13 VFFYVPNLIGYTRVLLSLYSLAVAL---TDYKTSVLCYALSFTCDYFDGFFARLCDQCSTFGAVLDMVTDRCSTAGLLVVLSHLYPQYMVVFMY--LLILDFASHWYHMYSSRG-HHKV--VAAERNFLLRFYYGCYPFFGFCCVGAELFYILLYVLY----FDPTLLIPYVNVPIMQLCYYVCLPACVS-------------KNVINVAQLCSAANSVAAEDVAIANKTK 218
BLAST of EWM28836.1 vs. NCBI_GenBank
Match: gi|570331684|gb|ETO79632.1| (hypothetical protein F444_05704 [Phytophthora parasitica P1976] >gi|970627822|gb|KUF75636.1| Phosphatidylinositol synthase (PIS) [Phytophthora nicotianae]) HSP 1 Score: 137.887 bits (346), Expect = 5.868e-35 Identity = 83/226 (36.73%), Postives = 121/226 (53.54%), Query Frame = 0
Query: 93 VLFYAPNVIGYVRVAVTLYAFYLGVQRKSDWRSVVSLYFLAFALDAVDGYVARMCGQESGFGGVLDMVTDRTATAGLVMLNLVVEGDELRKFGWICLCMLDIGSHWFHCVAAAGAHHKSEEATAGKNAVLRWYYACKPLFFACCLGQEAFYLINYIQRKGGKFGGIAMPSWVPREVEELLPTTVEGWLASITLVFATIKQVVNVVQLASAAVTLAEAD---AQKKK 315
V FY PN+IGY RV ++LY+ + + +D+++ V Y L+F D DG+ AR+C Q S FG VLDMVTDR +TAGL+++ + + F + L +LD SHW+H ++ G HHK A +N +LR+YY C P F CC+G E FY++ Y+ + P + + V + L K + NV QL SAA ++A D A K K
Sbjct: 12 VFFYVPNLIGYTRVVLSLYSLAVAL---TDYKTSVLCYALSFTCDYFDGFFARLCDQCSTFGAVLDMVTDRCSTAGLLVVLSHLYPQYMLVFMY--LLILDFSSHWYHMYSSRG-HHKV--VAAERNFLLRFYYGCYPFFGFCCVGTELFYILLYVLH------------FDPTLLIPFINVPVMQLCYYVCLPACVCKNITNVAQLCSAAYSVAAEDVALANKAK 217 The following BLAST results are available for this feature:
BLAST of EWM28836.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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