EWM28836.1, cds1834 (CDS) Nannochloropsis gaditana

Overview
NameEWM28836.1
Unique Namecds1834
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:266035..266989 -
Alignment locationCM002458.1:265725..265960 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28836.1
Productcdp-diacylglycerol-inositol 3-phosphatidyltransferase
Orig transcript idgnl|cribi|Naga_100199g9.9706.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:266035..266989 -
CM002458.1supercontigCM002458.1:265725..265960 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0006629lipid metabolic process
GO:0008654phospholipid biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0016780phosphotransferase activity, for other substituted phosphate groups
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR000462CDP-OH_P_trans
Homology
BLAST of EWM28836.1 vs. NCBI_GenBank
Match: gi|585111260|gb|EWM28836.1| (cdp-diacylglycerol-inositol 3-phosphatidyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 822.387 bits (2123), Expect = 0.000e+0
Identity = 396/396 (100.00%), Postives = 396/396 (100.00%), Query Frame = 0
Query:    1 MPRTSPYRTRGGRVVKSTANVSSGDGSITSTTKPRASSRRATIAGPLASPVTKRSPAPSTPTYESPSTSKKQSSARKSAGGSRSKGSVSKWAVLFYAPNVIGYVRVAVTLYAFYLGVQRKSDWRSVVSLYFLAFALDAVDGYVARMCGQESGFGGVLDMVTDRTATAGLVMLNLVVEGDELRKFGWICLCMLDIGSHWFHCVAAAGAHHKSEEATAGKNAVLRWYYACKPLFFACCLGQEAFYLINYIQRKGGKFGGIAMPSWVPREVEELLPTTVEGWLASITLVFATIKQVVNVVQLASAAVTLAEADAQKKKLKANTTEGQTRRQNVKQHHWKHNPMVYIEAQLMERKRLSNRGNGYLKRLSDRYEGYFLHTGAFIRRIFSIQNSSIKLKITC 396
            MPRTSPYRTRGGRVVKSTANVSSGDGSITSTTKPRASSRRATIAGPLASPVTKRSPAPSTPTYESPSTSKKQSSARKSAGGSRSKGSVSKWAVLFYAPNVIGYVRVAVTLYAFYLGVQRKSDWRSVVSLYFLAFALDAVDGYVARMCGQESGFGGVLDMVTDRTATAGLVMLNLVVEGDELRKFGWICLCMLDIGSHWFHCVAAAGAHHKSEEATAGKNAVLRWYYACKPLFFACCLGQEAFYLINYIQRKGGKFGGIAMPSWVPREVEELLPTTVEGWLASITLVFATIKQVVNVVQLASAAVTLAEADAQKKKLKANTTEGQTRRQNVKQHHWKHNPMVYIEAQLMERKRLSNRGNGYLKRLSDRYEGYFLHTGAFIRRIFSIQNSSIKLKITC
Sbjct:    1 MPRTSPYRTRGGRVVKSTANVSSGDGSITSTTKPRASSRRATIAGPLASPVTKRSPAPSTPTYESPSTSKKQSSARKSAGGSRSKGSVSKWAVLFYAPNVIGYVRVAVTLYAFYLGVQRKSDWRSVVSLYFLAFALDAVDGYVARMCGQESGFGGVLDMVTDRTATAGLVMLNLVVEGDELRKFGWICLCMLDIGSHWFHCVAAAGAHHKSEEATAGKNAVLRWYYACKPLFFACCLGQEAFYLINYIQRKGGKFGGIAMPSWVPREVEELLPTTVEGWLASITLVFATIKQVVNVVQLASAAVTLAEADAQKKKLKANTTEGQTRRQNVKQHHWKHNPMVYIEAQLMERKRLSNRGNGYLKRLSDRYEGYFLHTGAFIRRIFSIQNSSIKLKITC 396          
BLAST of EWM28836.1 vs. NCBI_GenBank
Match: gi|669168779|ref|XP_008619738.1| (hypothetical protein SDRG_15347 [Saprolegnia diclina VS20] >gi|530728594|gb|EQC26836.1| hypothetical protein SDRG_15347 [Saprolegnia diclina VS20])

HSP 1 Score: 154.836 bits (390), Expect = 1.328e-41
Identity = 92/222 (41.44%), Postives = 125/222 (56.31%), Query Frame = 0
Query:   93 VLFYAPNVIGYVRVAVTLYAFYLGVQRKSDWRSVVSLYFLAFALDAVDGYVARMCGQESGFGGVLDMVTDRTATAGLVMLNLVVEGDELRKFGWICLCMLDIGSHWFHCVAAAGAHHKSEEATAGKNAVLRWYYACKPLFFACCLGQEAFYLINYIQRKGGKFGGIAMPSWVPREVEELLPTTVEGWLASITLVFATIKQVVNVVQLASAAVTLAEADAQKK 314
            V FY PN+IGYVRVA+T Y+FY+    ++DW++ +  Y  +F  D  DG+ AR   Q S FG VLDMVTDR +TAGL  L ++       K  ++ L +LD  SHW+H  A+ G HHKS E+   KN +LR YY C PLF  CC+G E FY++ Y+             S+ P      LP     W          +K ++NV QLASAA ++AE D ++K
Sbjct:    7 VYFYIPNLIGYVRVALTAYSFYVA---ETDWKTSIICYAFSFICDYFDGFFARWFNQCSTFGAVLDMVTDRCSTAGL--LVILSHLYPAYKLAFLFLLVLDFSSHWYHMYASRG-HHKSIESK--KNVLLRVYYGCYPLFGYCCVGAEFFYILLYVL------------SFEPTLTVAGLPLASIAWYGCFPA--CVMKNIINVAQLASAAASVAEFDYEQK 206          
BLAST of EWM28836.1 vs. NCBI_GenBank
Match: gi|299115878|emb|CBN74441.1| (CDP-diacylglycerol---inositol 3-phosphatidyltransferase [Ectocarpus siliculosus])

HSP 1 Score: 153.295 bits (386), Expect = 9.160e-41
Identity = 93/230 (40.43%), Postives = 126/230 (54.78%), Query Frame = 0
Query:   89 SKWAVLFYAPNVIGYVRVAVTLYAFYLGVQRKSDWRSVVSLYFLAFALDAVDGYVARMCGQESGFGGVLDMVTDRTATAGLVM-LNLVVEGDELRKFGWICLCMLDIGSHWFHCVAAAGAHHKSEEATAGKNAVLRWYYACKPLFFACCLGQEAFYLINYI-----QRKGGKFGGIAMPSWVPREVEELLPTTVEGWLASITLVFATIKQVVNVVQLASAAVTLAEADAQ 312
            S WAVLFY PN+IGY R+   L ++YL     ++W++    Y LAF  DAVDG VAR   Q S FG VLDMVTDR +TAGL+M L+ + EG     F ++ L  +D+ SHW H  + AG HHK+ +  A +N + R +Y C P F  CC+G E FY+  Y+     +      GG A  S         LP  V              KQ VNV QL +A+++LA A+++
Sbjct:    5 SPWAVLFYFPNLIGYARIIAVLASYYLA---DTNWKASFVCYVLAFVGDAVDGAVARYFNQSSKFGAVLDMVTDRCSTAGLLMVLSRLYEGGT-PAFLFLLLMFIDLFSHWMHVQSTAGRHHKAADTLADRNVITRLFYGCYPFFAFCCVGTELFYVALYLLVFVPEASLALGGGGAAVSLHAVCYYVFLPACV-------------CKQAVNVAQLCAASLSLASAESE 217          
BLAST of EWM28836.1 vs. NCBI_GenBank
Match: gi|813220283|ref|XP_012211505.1| (hypothetical protein SPRG_16809 [Saprolegnia parasitica CBS 223.65] >gi|641522665|gb|KDO17789.1| hypothetical protein SPRG_16809 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 152.14 bits (383), Expect = 1.536e-40
Identity = 91/222 (40.99%), Postives = 124/222 (55.86%), Query Frame = 0
Query:   93 VLFYAPNVIGYVRVAVTLYAFYLGVQRKSDWRSVVSLYFLAFALDAVDGYVARMCGQESGFGGVLDMVTDRTATAGLVMLNLVVEGDELRKFGWICLCMLDIGSHWFHCVAAAGAHHKSEEATAGKNAVLRWYYACKPLFFACCLGQEAFYLINYIQRKGGKFGGIAMPSWVPREVEELLPTTVEGWLASITLVFATIKQVVNVVQLASAAVTLAEADAQKK 314
            V  Y PN+IGYVRVA+T Y+FY+    ++DW++ +  Y  +F  D  DG+ AR   Q S FG VLDMVTDR +TAGL  L ++       K  ++ L +LD  SHW+H  A+ G HHKS E+   KN +LR YY C PLF  CC+G E FY++ Y+             S+ P      LP     W          +K ++NV QLASAA ++AE D ++K
Sbjct:    7 VYLYIPNLIGYVRVALTAYSFYVA---ETDWKTSIICYAFSFICDYFDGFFARWFNQCSTFGAVLDMVTDRCSTAGL--LVILSHLYPAYKLAFLFLLVLDFSSHWYHMYASRG-HHKSIESK--KNVLLRVYYGCYPLFGYCCVGAEFFYILLYVL------------SFEPTLAVAGLPLASIAWYGCFPA--CVMKNIINVAQLASAAASVAEFDYEQK 206          
BLAST of EWM28836.1 vs. NCBI_GenBank
Match: gi|1173950962|gb|OQR98892.1| (phosphatidylinositol synthase (PIS) [Achlya hypogyna])

HSP 1 Score: 146.362 bits (368), Expect = 2.846e-38
Identity = 92/229 (40.17%), Postives = 129/229 (56.33%), Query Frame = 0
Query:   93 VLFYAPNVIGYVRVAVTLYAFYLGVQRKSDWRSVVSLYFLAFALDAVDGYVARMCGQESGFGGVLDMVTDRTATAG-LVMLNLVVEGDELRKFGWICLCMLDIGSHWFHCVAAAGAHHKSEEATAGKNAVLRWYYACKPLFFACCLGQEAFYLINYIQRKGGKFGGIAMPSWVPREVEELLPTTVEGWLASITLVFATIKQVVNVVQLASAAVTLAEADAQKKKLKANT 320
            V FY PN+IGY+RV +T Y+FY+    ++DW++ +  Y  +F  D  DG+ AR   Q S FG VLDMVTDR +TAG LV+L+ +       K  ++ L +LD  SHW+H  ++ G HHKS E+   KN +LR YY C PLF  CC+G E FY++ Y+           +P         L      G L +       +K ++NV QLASAA ++AE D   +K+KA T
Sbjct:    7 VYFYIPNLIGYLRVFLTGYSFYVA---ETDWKTSIICYAFSFICDYFDGFFARWFNQCSTFGAVLDMVTDRCSTAGLLVILSHLYPS---YKLAFLFLLVLDFSSHWYHMYSSRG-HHKSIESK--KNFLLRVYYGCYPLFGYCCVGAEFFYILLYVLSFEPTLAVAGVP---------LSSIAFYGCLPA-----CVMKNIINVAQLASAAASVAEFDFN-EKMKART 211          
BLAST of EWM28836.1 vs. NCBI_GenBank
Match: gi|698788532|ref|XP_009827298.1| (hypothetical protein H257_04468 [Aphanomyces astaci] >gi|574118387|gb|ETV83868.1| hypothetical protein H257_04468 [Aphanomyces astaci])

HSP 1 Score: 144.821 bits (364), Expect = 9.338e-38
Identity = 93/230 (40.43%), Postives = 135/230 (58.70%), Query Frame = 0
Query:   90 KWAVLFYAPNVIGYVRVAVTLYAFYLGVQRKSDWRSVVSLYFLAFALDAVDGYVARMCGQESGFGGVLDMVTDRTATAGLVMLNLVVEGDELRKFGWICLCMLDIGSHWFHCVAAAGAHHKSEEATAGKNAVLRWYYACKPLFFACCLGQEAFYLINYIQRKGGKFGGIAMPSWVPREVEELLPTTVEGWLASITLVFATIKQVVNVVQLASAAVTLAEADAQKKKLKAN 319
            K  V FY PN+IGY RV +T Y+FY+ +   SDW++ V  Y ++F  D  DGY AR   Q S FG VLDMVTDR +TAGL+++   ++ D    F +  L +LD  SHW+H  A+ G HHKS ++   KN +LR YY C PLF  CC+G E FY++ Y+ +          P+++   V+  +P ++  +   + L    IK ++NV QL SAA ++AE D  +K  K +
Sbjct:    3 KEEVYFYIPNLIGYTRVLLTGYSFYVAL---SDWKTAVVCYAISFICDFFDGYFARWFNQCSTFGAVLDMVTDRCSTAGLLVILSHLDKDNTLLFLF--LLVLDFSSHWYHMYASRG-HHKSVDSK--KNFLLRVYYGCYPLFGYCCVGAEFFYILYYVLQHD--------PTYLVPYVD--IPLSIVCYY--VCLPACVIKNIINVAQLCSAAASVAEYDFDQKLQKTS 212          
BLAST of EWM28836.1 vs. NCBI_GenBank
Match: gi|1173954882|gb|OQS02016.1| (phosphatidylinositol synthase (PIS) [Thraustotheca clavata])

HSP 1 Score: 140.969 bits (354), Expect = 2.918e-36
Identity = 86/225 (38.22%), Postives = 123/225 (54.67%), Query Frame = 0
Query:   90 KWAVLFYAPNVIGYVRVAVTLYAFYLGVQRKSDWRSVVSLYFLAFALDAVDGYVARMCGQESGFGGVLDMVTDRTATAGLVMLNLVVEGDELRKFGWICLCMLDIGSHWFHCVAAAGAHHKSEEATAGKNAVLRWYYACKPLFFACCLGQEAFYLINYIQRKGGKFGGIAMPSWVPREVEELLPTTVEGWLASITLVFATIKQVVNVVQLASAAVTLAEADAQKK 314
            K  V  Y PN+IGY+RVA+T+Y+FY+    ++DW++ +  Y  +F  D  DG+ ARM  Q S +G VLDMVTDR +TAGL  L ++       K  ++ L +LD  SHW+H  AA G HHK+ ++   KN +LR YY+  PLF  CC+G E FY+  Y+           +P         L      G   +       +K ++NV QL SAA ++AE D  +K
Sbjct:    3 KSEVYVYIPNLIGYLRVALTIYSFYVA---ETDWKTSIVCYAFSFICDYFDGFFARMFNQCSTYGAVLDMVTDRCSTAGL--LVILSHLYPTYKLAFLGLLVLDFSSHWYHMYAARG-HHKNIDSK--KNFLLRVYYSFYPLFGYCCVGAEFFYITLYVLSFEPNLTIFTIP---------LAAIAKYGCFPA-----CVMKNIINVAQLCSAAASVAEFDYDEK 205          
BLAST of EWM28836.1 vs. NCBI_GenBank
Match: gi|673046995|ref|XP_008877458.1| (hypothetical protein H310_12242 [Aphanomyces invadans] >gi|574466872|gb|ETV93898.1| hypothetical protein H310_12242 [Aphanomyces invadans])

HSP 1 Score: 139.813 bits (351), Expect = 8.209e-36
Identity = 90/228 (39.47%), Postives = 131/228 (57.46%), Query Frame = 0
Query:   90 KWAVLFYAPNVIGYVRVAVTLYAFYLGVQRKSDWRSVVSLYFLAFALDAVDGYVARMCGQESGFGGVLDMVTDRTATAGLVMLNLVVEGDELRKFGWICLCMLDIGSHWFHCVAAAGAHHKSEEATAGKNAVLRWYYACKPLFFACCLGQEAFYLINYIQRKGGKFGGIAMPSWVPREVEELLPTTVEGWLASITLVFATIKQVVNVVQLASAAVTLAEADAQKKKLK 317
            K  V FY PN+IGY RV +T Y+ YL +   SDW++ V  Y ++F  D  DGY AR   Q S FG VLDMVTDR +TAGL++  ++   D+ R   ++ L +LD  SHW+H  A+ G HHK+ +  + KN +LR YY C PLF  CC+G E FY++ Y+         + +P          +P ++  +   + L    +K ++NV QL SAA ++AE D + K+ K
Sbjct:    3 KEEVYFYIPNLIGYTRVFLTGYSLYLAL---SDWKTAVVCYAISFICDFFDGYFARWFDQCSTFGAVLDMVTDRCSTAGLLV--ILSHLDKDRTLLFLFLLVLDFSSHWYHMYASRG-HHKTVD--SNKNFLLRVYYGCYPLFGYCCVGAEFFYILYYVLLHD---AALVVP-------YANVPLSIVCYF--LCLPACVLKNIINVAQLCSAAASVAEYDFEHKQQK 210          
BLAST of EWM28836.1 vs. NCBI_GenBank
Match: gi|1214694815|gb|OWZ08762.1| (CDP-diacylglycerol-inositol 3-phosphatidyltransferase [Phytophthora megakarya])

HSP 1 Score: 137.887 bits (346), Expect = 4.994e-35
Identity = 87/231 (37.66%), Postives = 125/231 (54.11%), Query Frame = 0
Query:   93 VLFYAPNVIGYVRVAVTLYAFYLGVQRKSDWRSVVSLYFLAFALDAVDGYVARMCGQESGFGGVLDMVTDRTATAGLVMLNLVVEGDELRKFGWICLCMLDIGSHWFHCVAAAGAHHKSEEATAGKNAVLRWYYACKPLFFACCLGQEAFYLINYIQRKGGKFGGIAMPSWVPREVEEL-----LPTTVEGWLASITLVFATIKQVVNVVQLASAAVTLAEAD---AQKKK 315
            V FY PN+IGY RV ++LY+  + +   +D+++ V  Y L+F  D  DG+ AR+C Q S FG VLDMVTDR +TAGL+++   +    +  F +  L +LD  SHW+H  ++ G HHK     A +N +LR+YY C P F  CC+G E FY++ Y+      F    +  +V   + +L     LP  V              K V+NV QL SAA ++A  D   A K K
Sbjct:   13 VFFYVPNLIGYTRVLLSLYSLAVAL---TDYKTSVLCYALSFTCDYFDGFFARLCDQCSTFGAVLDMVTDRCSTAGLLVVLSHLYPQYMVVFMY--LLILDFASHWYHMYSSRG-HHKV--VAAERNFLLRFYYGCYPFFGFCCVGAELFYILLYVLY----FDPTLLIPYVNVPIMQLCYYVCLPACVS-------------KNVINVAQLCSAANSVAAEDVAIANKTK 218          
BLAST of EWM28836.1 vs. NCBI_GenBank
Match: gi|570331684|gb|ETO79632.1| (hypothetical protein F444_05704 [Phytophthora parasitica P1976] >gi|970627822|gb|KUF75636.1| Phosphatidylinositol synthase (PIS) [Phytophthora nicotianae])

HSP 1 Score: 137.887 bits (346), Expect = 5.868e-35
Identity = 83/226 (36.73%), Postives = 121/226 (53.54%), Query Frame = 0
Query:   93 VLFYAPNVIGYVRVAVTLYAFYLGVQRKSDWRSVVSLYFLAFALDAVDGYVARMCGQESGFGGVLDMVTDRTATAGLVMLNLVVEGDELRKFGWICLCMLDIGSHWFHCVAAAGAHHKSEEATAGKNAVLRWYYACKPLFFACCLGQEAFYLINYIQRKGGKFGGIAMPSWVPREVEELLPTTVEGWLASITLVFATIKQVVNVVQLASAAVTLAEAD---AQKKK 315
            V FY PN+IGY RV ++LY+  + +   +D+++ V  Y L+F  D  DG+ AR+C Q S FG VLDMVTDR +TAGL+++   +    +  F +  L +LD  SHW+H  ++ G HHK     A +N +LR+YY C P F  CC+G E FY++ Y+              + P  +   +   V      + L     K + NV QL SAA ++A  D   A K K
Sbjct:   12 VFFYVPNLIGYTRVVLSLYSLAVAL---TDYKTSVLCYALSFTCDYFDGFFARLCDQCSTFGAVLDMVTDRCSTAGLLVVLSHLYPQYMLVFMY--LLILDFSSHWYHMYSSRG-HHKV--VAAERNFLLRFYYGCYPFFGFCCVGTELFYILLYVLH------------FDPTLLIPFINVPVMQLCYYVCLPACVCKNITNVAQLCSAAYSVAAEDVALANKAK 217          
The following BLAST results are available for this feature:
BLAST of EWM28836.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111260|gb|EWM28836.1|0.000e+0100.00cdp-diacylglycerol-inositol 3-phosphatidyltransfer... [more]
gi|669168779|ref|XP_008619738.1|1.328e-4141.44hypothetical protein SDRG_15347 [Saprolegnia dicli... [more]
gi|299115878|emb|CBN74441.1|9.160e-4140.43CDP-diacylglycerol---inositol 3-phosphatidyltransf... [more]
gi|813220283|ref|XP_012211505.1|1.536e-4040.99hypothetical protein SPRG_16809 [Saprolegnia paras... [more]
gi|1173950962|gb|OQR98892.1|2.846e-3840.17phosphatidylinositol synthase (PIS) [Achlya hypogy... [more]
gi|698788532|ref|XP_009827298.1|9.338e-3840.43hypothetical protein H257_04468 [Aphanomyces astac... [more]
gi|1173954882|gb|OQS02016.1|2.918e-3638.22phosphatidylinositol synthase (PIS) [Thraustotheca... [more]
gi|673046995|ref|XP_008877458.1|8.209e-3639.47hypothetical protein H310_12242 [Aphanomyces invad... [more]
gi|1214694815|gb|OWZ08762.1|4.994e-3537.66CDP-diacylglycerol-inositol 3-phosphatidyltransfer... [more]
gi|570331684|gb|ETO79632.1|5.868e-3536.73hypothetical protein F444_05704 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1838rna1838Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications