EWM30500.1, cds183 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30500.1 vs. NCBI_GenBank
Match: gi|585113164|gb|EWM30500.1| (poly -specific ribonuclease parn [Nannochloropsis gaditana]) HSP 1 Score: 1332.39 bits (3447), Expect = 0.000e+0 Identity = 644/644 (100.00%), Postives = 644/644 (100.00%), Query Frame = 0
Query: 1 MHIASLGPFAGSLESTPRTMDVTKATFADVLPEIEAALQNCEFVAVDFEMSGINLAGQPRITYADTMQERYAQQRVVASRFKIIQMGISIVSKVEKTGSSGNSASHTLVACPYNFYTFAADGDDVILSLSAIHFLKDHGMDFNKWIQEGVSYTNAAREEELIKRLDCERERDEEEIKKPEGGAPGKTQMNLTKPADVEFMKKQMEVVKAWREESEILGGAESLSEEEKSEAARRRKELTLARTNAFMRRALFEAIEIYYPDLITESRNNQVIVLRLSAAEKEERMAAREAARQSRRLSTVGMRLVFKAMSACARPIVVHNGFFDLLFMMAAFHKPLPEKLVDFKADVRACFPAGVYDTRLISTREDLLGKSLGDKGLEGLCQALVQETPEGGVDLVLAEGFEKYGGSERQAFAHEAGYDAYLTGAVFARMQVLLGDAGLEKLKMMVFSFRSMFVTNLGEDRDWPVYGQQGELVFHLGWEKEAGKDLKDADLMKLFGDRSADTWILWIDDCGAFAVLQGKEGGEALRGEDVLKALPETSTVVRVTTFKDWCAAKEAETEAAGEPVEVGKDGWEKVRKHEKRLVILDQLPRSNWSATISCASCKNCVILMILLGLTLTLTDDFVRVVGWTSRQIMFQNQSHHDFDN 644
MHIASLGPFAGSLESTPRTMDVTKATFADVLPEIEAALQNCEFVAVDFEMSGINLAGQPRITYADTMQERYAQQRVVASRFKIIQMGISIVSKVEKTGSSGNSASHTLVACPYNFYTFAADGDDVILSLSAIHFLKDHGMDFNKWIQEGVSYTNAAREEELIKRLDCERERDEEEIKKPEGGAPGKTQMNLTKPADVEFMKKQMEVVKAWREESEILGGAESLSEEEKSEAARRRKELTLARTNAFMRRALFEAIEIYYPDLITESRNNQVIVLRLSAAEKEERMAAREAARQSRRLSTVGMRLVFKAMSACARPIVVHNGFFDLLFMMAAFHKPLPEKLVDFKADVRACFPAGVYDTRLISTREDLLGKSLGDKGLEGLCQALVQETPEGGVDLVLAEGFEKYGGSERQAFAHEAGYDAYLTGAVFARMQVLLGDAGLEKLKMMVFSFRSMFVTNLGEDRDWPVYGQQGELVFHLGWEKEAGKDLKDADLMKLFGDRSADTWILWIDDCGAFAVLQGKEGGEALRGEDVLKALPETSTVVRVTTFKDWCAAKEAETEAAGEPVEVGKDGWEKVRKHEKRLVILDQLPRSNWSATISCASCKNCVILMILLGLTLTLTDDFVRVVGWTSRQIMFQNQSHHDFDN
Sbjct: 1 MHIASLGPFAGSLESTPRTMDVTKATFADVLPEIEAALQNCEFVAVDFEMSGINLAGQPRITYADTMQERYAQQRVVASRFKIIQMGISIVSKVEKTGSSGNSASHTLVACPYNFYTFAADGDDVILSLSAIHFLKDHGMDFNKWIQEGVSYTNAAREEELIKRLDCERERDEEEIKKPEGGAPGKTQMNLTKPADVEFMKKQMEVVKAWREESEILGGAESLSEEEKSEAARRRKELTLARTNAFMRRALFEAIEIYYPDLITESRNNQVIVLRLSAAEKEERMAAREAARQSRRLSTVGMRLVFKAMSACARPIVVHNGFFDLLFMMAAFHKPLPEKLVDFKADVRACFPAGVYDTRLISTREDLLGKSLGDKGLEGLCQALVQETPEGGVDLVLAEGFEKYGGSERQAFAHEAGYDAYLTGAVFARMQVLLGDAGLEKLKMMVFSFRSMFVTNLGEDRDWPVYGQQGELVFHLGWEKEAGKDLKDADLMKLFGDRSADTWILWIDDCGAFAVLQGKEGGEALRGEDVLKALPETSTVVRVTTFKDWCAAKEAETEAAGEPVEVGKDGWEKVRKHEKRLVILDQLPRSNWSATISCASCKNCVILMILLGLTLTLTDDFVRVVGWTSRQIMFQNQSHHDFDN 644
BLAST of EWM30500.1 vs. NCBI_GenBank
Match: gi|1129213218|gb|OLQ14170.1| (Poly(A)-specific ribonuclease PARN [Symbiodinium microadriaticum]) HSP 1 Score: 225.713 bits (574), Expect = 5.062e-59 Identity = 177/544 (32.54%), Postives = 260/544 (47.79%), Query Frame = 0
Query: 18 RTMDVTKATFADVLPEIEAALQNCEFVAVDFEMSGINLAGQPRITYADTMQERYAQQRVVASRFKIIQMGISIVSKVEKTGSSGNSASHTLVACPYNFYTFAADGDDVILSLSAIHFLKDHGMDFNKWIQEGVSYTNAAREEELIKRLDCERERDEEEIKKPEGGAPGKTQMNLTKPADVEFMKKQMEVVKAWREESEILGGAESLSEEEKSEAARRRKELTLARTNAFMRRALFEAIEIYYPDLITESRNNQV------IVLRLSAAEKEERMAAREAARQSRRLSTVGMRLVFKAMSACARPIVVHNGFFDLLFMMAAFHKPLPEKLVDFKADVRACFPAGVYDTRLISTREDLLGKSLGDKG---------LEGLCQALVQETPEG-------GVDLVLAEGFEKYGGSERQAFAHEAGYDAYLTGAVFARM-QVLLGDAGLEKLKMMVFSFRSMFVTNL-GED----------------RDWPVYGQQGELVFHLGWEKEAGKDLKDADLMKLFGDRSADTWILWIDDCGAFAVLQGKEG 521
R M+VTK+ F D E+E L + EFVA+D EM+GI L G D RY++ R VAS + IIQ G+++ +K E + + VA YNFYTF G V + S++HF +GMD+N WI+EGV Y +L +L E E +P ++ LT D+E K + +K W L+EE + + KE + NA++RR + E + +PDL ESR ++ + LRL+AAEK ER A A +++ VG+R VF A++ +PI+ H +DL+F + F PLPE DFK V FP+ VYDT+L++ + L KS D G G +++E E V + LAEG E+Y + A HEAG+DAY+TG FA M + + + G + K + FR+ F NL GED R+ + + + + K G D+ +A L D + I W+DD AFA+ + G
Sbjct: 624 RAMNVTKSNFLDAAAEVERLLPSVEFVAIDEEMTGIFLPGLQEFI-GDAPSTRYSKMRRVASNYSIIQFGVALFTKEE-------GSENKFVAHAYNFYTFPETGA-VNMEASSVHFNSKNGMDWNSWIREGVPYVTREAAAKLKLQLFPE-----------ENTSPAAKRIQLTSTFDIENTDKAIASLKDW------------LAEEGQDQ-----KEFEIITCNAYLRRFMHETLRESFPDLAVESRPTKIRGLSTMVALRLTAAEKVERDARIRAEKEAEFTMKVGVRRVFAALANSKKPIIGHACLYDLMFAFSHFEGPLPESFSDFKKSVCDLFPS-VYDTQLLARSDALKLKS--DSGELQQRFKSFALGEVHRVLREEAEAQRADGVETVQITLAEGHERYATA---ASYHEAGFDAYITGCAFAYMARHVPAEEGDKTFKGRLVMFRNFFNVNLQGEDELITDGAYLHTRGLTGRNATEFTEILQSILKKIKAKPEGSDM-EATL-----DSNDSFQIRWVDDDSAFAIFPAQSG 1118
BLAST of EWM30500.1 vs. NCBI_GenBank
Match: gi|873229979|emb|CEM11778.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 209.92 bits (533), Expect = 1.636e-56 Identity = 164/529 (31.00%), Postives = 253/529 (47.83%), Query Frame = 0
Query: 34 IEAALQNCEFVAVDFEMSGINLAGQP--RITYADTMQERYAQQRVVASRFKIIQMGISIVSKVEKTGSSGNSASHTLVACPYNFYTFAADGDD-----VILSLSAIHFLKDHGMDFNKWIQEGVSYTNAAREEELIKRL-DCERERDEEEIKKPEGGAPGKTQ--MNLTKPADVEFMKKQMEVVKAWREESEILGGAESLSEEEKSEAARRRKELTLARTNAFMRRALFEAIEIYYPDLITESRNN------QVIVLRLSAAEKEERMAAREAARQSRRLSTVGMRLVFKAMSACARPIVVHNGFFDLLFMMAAFHKPLPEKLVDFKADVRACFPAGVYDTRLISTREDLLGKSLGDKGLEGLCQALVQETPEGGVDLVLAEGFEKYGGSERQAFAHEAGYDAYLTGAVFARMQVLLGDAGLEKLKMMVFSFRSM-----FVTN-----LGEDRDWPVYGQQGELVFHLGWEKEAGKDLKDADLMKLFGDRSADT------WILWIDDCGAFAVLQGK-----EGGEAL 525
EAA+ + F+A+D EM+GI L P +I+ +DT RY + + VAS++ I Q G+ + ++ + + SG T P+NFY F +D +++ S++ FL+ H DF +W+ +G+SY +AA E L + L ++ D ++ PG+ Q + LT+ D+ ++ ME V A + GA KEL L N F+ RA+ E IE +P LI E+R Q +VL L+ EK+ER +AA++ VG+R V+K + +P+VVHNG +DLLF+ PLP+ FK A P YDT+L+++ K GLE L + L + + V+ V+AEGF+ Y A HEAGYDAY+TG +FA + D G+ + + M F TN +GEDR + +G +++ G+E + D + F D S + WID V+ G +GGE L
Sbjct: 2 FEAAVPSAAFIAIDLEMTGITLNSNPFTKISASDTPDVRYGKMQKVASQYGIAQWGVCLFAEGQDSSGSGK---RTYEVRPFNFYCFPRAHNDSFSQQLLIDSSSMDFLRSHSFDFGRWMSKGISYLDAAGERNLAESLFPTPQQLDPLDM-------PGRPQHKIELTRQDDISYLANVMESVGAM-----LQSGA---------------KELVLPNCNTFLARAVRETIEARFPHLIVETRPGKSRWIPQRVVLNLTVEEKQEREERDKAAKRKVFREQVGLRRVWKMICKSRKPVVVHNGLYDLLFLYHRMEAPLPDGAAAFKKAKAALLPT-TYDTKLLASHHP--DKQFDSTGLEDLTEQLAERS-SLPVEFVMAEGFDTYRADAGNAKFHEAGYDAYVTGRLFA---YFMADPGIPDVSVHANYLHLMRSLWDFNTNVEGDLVGEDR-LILDTDKGIILWLHGFEHA----FNNTDFQRYFSDISGEAGDALKPQFRWIDQSSMLFVVPGGRAVTLDGGEGL 488
BLAST of EWM30500.1 vs. NCBI_GenBank
Match: gi|1099050618|emb|CCM15767.1| (hypothetical protein, conserved [Leishmania guyanensis]) HSP 1 Score: 204.527 bits (519), Expect = 4.053e-54 Identity = 161/487 (33.06%), Postives = 240/487 (49.28%), Query Frame = 0
Query: 20 MDVTKATFADVLPEIEAALQNCEFVAVDFEMSGINLAGQPRITYADTM--QERYAQQRVVASRFKIIQMGISIVSKVEKTGSS-----GNSASHTLVACPYNFYTFAADGDD---------VILSLSAIHFLKDHGMDFNKWIQEGVSYTNAAREEEL-------IKRLDCERER---DEEEIKKPEGGAPGKTQMNLTKPADVEFMKKQMEVVKAWREESEILGGAESLSEEEKSEAARRRKELTLARTNAFMRRALFEAIEIYYPDLITESR----NNQVIVLRLSAAEKEERMAAREAARQSRRL-STVGMRLVFKAMSACARPIVVHNGFFDLLFMMAAFHKPLPEKLVDFKADVRACFPAGVYDTRLISTREDLLGKS-LGDKGLEGLCQALVQETPEGGVDLVLAEGFEKY--------GGSERQAFAHEAGYDAYLTGAVFARMQVLLGDAGLE------KLKMMVFSFRSMFVTNLGED 460
M V + F V P + L C+F AVD EM+GI G P +T T E Y +R+ ASR+ IIQ+G+ + ++ + S+ G SA VA P+NF F DD V++S SA+ FL+ HGMDF +W+ +G+++ +A+RE L + + + E D E + E + + + A E ++++ V ++ + GG E++ + S AAR + EL LAR YP L SR + V+ L + + E+ + A R A ++ R+L TVG RLVF + +P V HN F D LF+M+A LPE+L +KA R FP ++DTR +++R DL +S G+ L GL +A + +P V+L L GFE Y GGS AHEAGYDA +TG V LLG+AG +L + FRS++ +L D
Sbjct: 1 MQVRRDNFPAVFPHFQKLLHACDFYAVDEEMTGI---GVPEVTETITFAPSETYHSKRLAASRYSIIQVGVCLFRRIPVSSSAAATGVGASAPRRYVAYPFNFLLFPQFADDYTAEERAGDVVVSPSALAFLRRHGMDFQRWVYDGMAFCDASREAALRARLAAAVSQPETAAESLFTDAERLWLEEARQTAQALVGRVEAAWAEARQQKVGSV-SFLASVAVEGGKEAVLPVQASRAAREQLELELARE---------------YPQLSVRSRRAGPSGYVVTLAVLSPEEVSKHAWRAAQKERRQLLDTVGFRLVFTELVKSRKPCVGHNCFADWLFLMSAMDGALPEQLPQWKARARELFPC-MWDTRYLASRHDLFPRSRFGNISLGGLHEAYMGASPHCTVELPL--GFEGYDPVTLLGRGGSNA---AHEAGYDALMTGTVLLN---LLGEAGYTLETAPAELSHKLALFRSLYAVDLRSD 459
BLAST of EWM30500.1 vs. NCBI_GenBank
Match: gi|731697235|ref|XP_010699223.1| (poly(A)-specific ribonuclease PARN, putative [Leishmania panamensis] >gi|685204278|gb|AIN98516.1| poly(A)-specific ribonuclease PARN, putative [Leishmania panamensis]) HSP 1 Score: 195.282 bits (495), Expect = 1.061e-50 Identity = 158/487 (32.44%), Postives = 238/487 (48.87%), Query Frame = 0
Query: 20 MDVTKATFADVLPEIEAALQNCEFVAVDFEMSGINLAGQPRITYADTM--QERYAQQRVVASRFKIIQMGISIVSKVEKTGSSGNSA-----SHTLVACPYNFYTFAADGDD---------VILSLSAIHFLKDHGMDFNKWIQEGVSYTNAAREEEL-------IKRLDCERER---DEEEIKKPEGGAPGKTQMNLTKPADVEFMKKQMEVVKAWREESEILGGAESLSEEEKSEAARRRKELTLARTNAFMRRALFEAIEIYYPDLITESR----NNQVIVLRLSAAEKEERMAAREAARQSRRL-STVGMRLVFKAMSACARPIVVHNGFFDLLFMMAAFHKPLPEKLVDFKADVRACFPAGVYDTRLISTREDLLGKS-LGDKGLEGLCQALVQETPEGGVDLVLAEGFEKY--------GGSERQAFAHEAGYDAYLTGAVFARMQVLLGDAGLE------KLKMMVFSFRSMFVTNLGED 460
M V + F V P + L C+F AVD EM+GI G P +T T E Y +R+ ASR+ IIQ+G+ + ++ + S+ + VA P+NF F DD V++S SA+ FL+ HGMDF +W+ +G+++ +A+RE L + + + E D E + E + + + A E ++++ V ++ + GG E++ + S AAR + EL LAR YP L SR + V+ L + + E+ + A R A ++ R+L TVG RLVF + +P V HN F D LF+M+A LPE+L +KA R FP ++DTR +++R DL +S G+ L GL +A + +P V+L L GFE Y GGS AHEAGYDA +TG V LLG+AG +L + FRS++ +L D
Sbjct: 1 MQVRRDNFPAVFPHFQKLLHACDFYAVDEEMTGI---GVPEVTETITFAPSETYHSKRLAASRYSIIQVGVCLFRRIPVSSSAAAAGVGASAPRRYVAYPFNFLLFPQFADDYTAEERAGDVVVSPSALAFLRRHGMDFQRWVYDGMAFCDASREAALRARLAAAVSQPETAAESLFTDAERLWLEEARQTAQALVGRVEAAWAEARQQKVGSV-SFLASVAVEGGKEAVLPVQASRAAREQLELELARE---------------YPQLSVRSRRAGPSGYVVTLAVLSPEEVSKHAWRAAQKERRQLLDTVGFRLVFTELVKSRKPCVGHNCFADWLFLMSAMDGALPEQLPQWKARARELFPC-MWDTRYLASRHDLFPRSRFGNISLGGLHEAYMGASPHCTVELPL--GFEGYDPVTLLGRGGSNA---AHEAGYDALMTGTVLLN---LLGEAGYTLETAPAELSHKLALFRSLYAVDLRSD 459
BLAST of EWM30500.1 vs. NCBI_GenBank
Match: gi|154337822|ref|XP_001565137.1| (conserved hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] >gi|134062184|emb|CAM36572.1| conserved hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904]) HSP 1 Score: 193.741 bits (491), Expect = 3.220e-50 Identity = 158/487 (32.44%), Postives = 237/487 (48.67%), Query Frame = 0
Query: 20 MDVTKATFADVLPEIEAALQNCEFVAVDFEMSGINLAGQPRITYADTM--QERYAQQRVVASRFKIIQMGISIVSKVEKTGSSGNSAS-----HTLVACPYNFYTFAADGDD---------VILSLSAIHFLKDHGMDFNKWIQEGVSYTNAAREEEL-------IKRLDCERER---DEEEIKKPEGGAPGKTQMNLTKPADVEFMKKQMEVVKAWREESEILGGAESLSEEEKSEAARRRKELTLARTNAFMRRALFEAIEIYYPDLITESR----NNQVIVLRLSAAEKEERMAAREAARQSRRL-STVGMRLVFKAMSACARPIVVHNGFFDLLFMMAAFHKPLPEKLVDFKADVRACFPAGVYDTRLISTREDLLGKSLGDK-GLEGLCQALVQETPEGGVDLVLAEGFEKY--------GGSERQAFAHEAGYDAYLTGAVFARMQVLLGDAGLE------KLKMMVFSFRSMFVTNLGED 460
M V + F V P + L C+F AVD EM+GI G P +T T E Y +R+ ASR+ IIQ+G+ + ++ + S+ + VA P+NF F DD V++S SA+ FL+ HGMDF +W+ +G+++ +A+RE L + + + E D E + E + + + A E ++++ V ++ + GG E++ + S AAR + EL LAR YP L SR + V+ L + + E+ + A R A ++ R+L TVG RLVF + +P V HN F D LF+M+A LPE+L +KA R FP ++DTR +++R DL +S D L GL +A + +P V+L L GFE Y GGS AHEAGYDA +TG V LLG+AG +L + FRS++ +L D
Sbjct: 1 MQVRRDNFPAVFPHFQKLLHTCDFYAVDEEMTGI---GVPEVTETITFAPSETYHSKRLAASRYSIIQVGVCLFRRIPVSSSAAAAGVGAPAPQRYVAYPFNFLLFPQFADDYTAEERAGDVVVSPSALAFLRRHGMDFQRWVYDGMAFCDASREAALRARLAATVSQPETAAESLFTDAERLWLEEARQTAQALVGRVEAAWAEARQQKVGSV-SFLASVAVEGGKEAVLPVQASRAAREQLELELARE---------------YPQLSVRSRRAGPSGYVVTLAVLSPEEVSKHAWRAAQKERRQLLDTVGFRLVFTELVKSRKPCVGHNCFADWLFLMSAMDGALPEQLPQWKARARELFPC-MWDTRYLASRHDLFPRSRFDNISLGGLHEAYMGASPHCTVELPL--GFEGYDPVTLLGRGGSNA---AHEAGYDALMTGTVLLN---LLGEAGYTLETAPAELSHKLALFRSLYAVDLRSD 459
BLAST of EWM30500.1 vs. NCBI_GenBank
Match: gi|1134886869|gb|OMJ84284.1| (hypothetical protein SteCoe_14629 [Stentor coeruleus]) HSP 1 Score: 187.578 bits (475), Expect = 8.428e-49 Identity = 136/462 (29.44%), Postives = 215/462 (46.54%), Query Frame = 0
Query: 17 PRTMDVTKATFADVLPEIEAALQNCEFVAVDFEMSGINLAGQPRITYADTMQERYAQQRVVASRFKIIQMGISIVSKVEKTGSSGNSASHTLVACPYNFYTFAAD----GDDVILSLSAIHFLKDHGMDFNKWIQEGVSYTNAAREEELIKRLDCERERDEEEIKKPEGGAPGKTQMNLTKPADVEFMKKQMEVVKAWREESEILGGAESLSEEEKSEAARRRKELTLARTNAFMRRALFEAIEIYYPDLITES------RNNQVIVLRLSAAEKEERMAAREAARQSRRLSTVGMRLVFKAMSACARPIVVHNGFFDLLFMMAAFHKPLPEKLVDFKADVRACFPAGVYDTRLISTR----EDLLGKSLGDKGLEGLCQALVQETPEGGVDLVLAEGFEKYGGSERQAFAHEAGYDAYLTGAVFARMQVLLGDAGLEKLKMMVFSFRSMFVTNL-GEDRDW 463
P MDV K F + + ++ + + +A+D E +G+ G+P Y D+++ERY+ R +AS +KIIQ+G+S + E A PYNFY F ++ VIL + AI+FLK+H MDFN W G+ Y N A+ +L K+L E E+I LTK + M + ++ W E +E + NA++R+ L+ + + + ES R+ +++ + + +E A R + + +G R +F + +P++VHNG D+LF +A+F + LPEK DFK V FP +YDTR + R + K KGL+ L L G +VL FEKY + +AHEAG+DA++TG F ++ + A +E K + F+S F L G+D W
Sbjct: 14 PYIMDVQKNNFGEAVELFRESINHSQIIALDLEFTGVR--GRPE-GYLDSIEERYSGLRRIASTYKIIQVGLSCFIRKENQWE----------AHPYNFYVFPSEVPGYNQRVILEVGAINFLKEHHMDFNTWFYNGIPYLNEAQSRDLEKKLSEVNEESSEDII-------------LTKTYEQIKMNEICFRIEKWLESNE--------------------AHFEIQGLNAYLRKYLYNVVRKKFKGVFMESIKVEGSRDVTLVLKKADHNQIQELEAKRLVEKTEQFYEKIGFRRIFSMLVESKKPLIVHNGCVDILFTIASFQEELPEKYSDFKTLVNRLFPI-IYDTRYLLERIPGFYEEFDKIATAKGLKELYNFL---KGNSGSQIVLGNKFEKYYN---EKYAHEAGFDAFMTGICFLKLAEV--HAEIENFKNHLPLFKSFFSIRLDGDDIMW 420
BLAST of EWM30500.1 vs. NCBI_GenBank
Match: gi|401422399|ref|XP_003875687.1| (conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] >gi|322491926|emb|CBZ27199.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103]) HSP 1 Score: 189.504 bits (480), Expect = 1.151e-48 Identity = 153/491 (31.16%), Postives = 230/491 (46.84%), Query Frame = 0
Query: 20 MDVTKATFADVLPEIEAALQNCEFVAVDFEMSGINLAGQPRITYADTM--QERYAQQRVVASRFKIIQMGISIVSKVEKTGSS-----GNSASHTLVACPYNFYTFAADGDD---------VILSLSAIHFLKDHGMDFNKWIQEGVSYTNAAREEELIKRLDCERERDEEEIKKPEGGAPGKTQMNLTKPADVEFMKKQMEVVKAWREESE--------------ILGGAESLSEEEKSEAARRRKELTLARTNAFMRRALFEAIEIYYPDLITESR----NNQVIVLRLSAAEKEERMAAREAARQSRR-LSTVGMRLVFKAMSACARPIVVHNGFFDLLFMMAAFHKPLPEKLVDFKADVRACFPAGVYDTRLISTREDLL-GKSLGDKGLEGLCQALVQETPEGGVDLVLAEGFEKY--------GGSERQAFAHEAGYDAYLTGAVFARMQVLLGDAGLE------KLKMMVFSFRSMFVTNLGED 460
M V + F VLP + L+ C+F A+D EM+GI G P +T T E Y +R+ ASR+ IIQ+G+ + ++ + + G A+ A P+NF F DD V++S SA+ FL+ HGMDF +W+ +G+++ +A+RE L RL E +P + + + +++ A E+ + GG E++ + S AAR + EL L R P + SR + V+ L + + E+ + A R A ++ R+ L TVG RLVF + +P V HN F D LF+M+A LPE+L +KA R FP ++DTR +++R DL G G L GL +A + +P V+L L GFE Y GGS+ AHEAGYDA +TG V LLG+ G +L + FRS++ +L D
Sbjct: 1 MQVRRDNFPAVLPHFQELLRTCDFYAIDEEMTGI---GVPEVTETITFAPSETYHSKRLAASRYSIIQVGVCLFRRIPVSSGATAAGVGTPAAPRYAAYPFNFLLFPQFADDYTAEERAGDVVVSPSALAFLRRHGMDFQRWVYDGMAFCDASREAALRARLAAAAASQSETTAEPLFTDAERAWLEEARQTAHALVRRVEAAWAAATSEARQQKAGRVSFLASVAVEGGKEAVLPVQASRAAREQLELELGREC---------------PQVSVRSRRTGSSGYVVTLAVLSPEEVSKNAWRRAQKERRQLLDTVGFRLVFTELVKSRKPCVGHNCFADWLFLMSAMDGALPEQLPQWKARARELFPC-MWDTRYLASRRDLFPGGRFGSISLSGLHEAYLGASPHCTVELPL--GFEGYDPVTLLGRGGSDA---AHEAGYDALMTGTVLLN---LLGEVGYTVETAPAELSQKLALFRSLYAVDLRSD 464
BLAST of EWM30500.1 vs. NCBI_GenBank
Match: gi|146087155|ref|XP_001465741.1| (conserved hypothetical protein [Leishmania infantum JPCM5] >gi|398015556|ref|XP_003860967.1| hypothetical protein, conserved [Leishmania donovani] >gi|134069841|emb|CAM68168.1| conserved hypothetical protein [Leishmania infantum JPCM5] >gi|322499191|emb|CBZ34262.1| hypothetical protein, conserved [Leishmania donovani]) HSP 1 Score: 189.504 bits (480), Expect = 1.376e-48 Identity = 156/491 (31.77%), Postives = 229/491 (46.64%), Query Frame = 0
Query: 20 MDVTKATFADVLPEIEAALQNCEFVAVDFEMSGINLAGQPRITYADTM--QERYAQQRVVASRFKIIQMGISIVSKVEKTGSS-----GNSASHTLVACPYNFYTFAADGDD---------VILSLSAIHFLKDHGMDFNKWIQEGVSYTNAAREEELIKRLDCERERDEEEIKKPEGGAPGKTQMNLTKPADVEFMKKQMEVV----------KAWR----EESEILGGAESLSEEEKSEAARRRKELTLARTNAFMRRALFEAIEIYYPDLITESR----NNQVIVLRLSAAEKEERMAAREAARQSRRL-STVGMRLVFKAMSACARPIVVHNGFFDLLFMMAAFHKPLPEKLVDFKADVRACFPAGVYDTRLISTREDLLGKS-LGDKGLEGLCQALVQETPEGGVDLVLAEGFEKY--------GGSERQAFAHEAGYDAYLTGAVFARMQVLLGDAGLE------KLKMMVFSFRSMFVTNLGED 460
M V + F V P + L+ C+F A+D EM+GI G P +T T E Y +R+ ASR+ IIQ+G+ + ++ + + G A A P+NF F DD V++S SA+ FL+ HGMDF +W+ +G+++ +A+RE L RL E P +T + + +++ KA R + GG E++ + S AAR + EL LAR YP L SR + V+ L + + E+ + A R A ++ R+L TVG RLVF + +P V HN F D LF+M+A LPE+L +KA R FP ++DTR +++R DL G L GL +A + +P V+L L GFE Y GGS+ AHEAGYDA +TG V LLG+ G +L + FRS++ +L D
Sbjct: 1 MQVRRDNFPAVFPHFQELLRTCDFYAIDEEMTGI---GVPEVTETITSAPSETYHSKRLAASRYSIIQVGVCLFRRIPVSSGAAAAGVGTPAPPRYAAYPFNFLLFPQFADDYTAEERAGDVVVSPSALAFLRRHGMDFQRWVYDGMAFCDASREAALRARLAAAAASQSETTAVPLFTDAERTWLEEARQTAQALVRRVEAAWAAATAEARQKKAGRVPFLASVVVEGGKEAVLPVQASRAAREQLELELARE---------------YPQLSVRSRRTGSSGYVVTLTVLSPEEVSKNAWRTAQKEWRQLLDTVGFRLVFTELVNSRKPCVGHNCFADWLFLMSAMDSTLPEQLPQWKARARELFPC-MWDTRYLASRRDLFPSGRFGSISLGGLHEAYLGASPHCIVELPL--GFEGYDPVTLLGRGGSDA---AHEAGYDALMTGTVLLN---LLGEVGYTLETAPAELSQKLALFRSLYAVDLRND 464
BLAST of EWM30500.1 vs. NCBI_GenBank
Match: gi|1002456671|ref|XP_015662474.1| (putative mitochondrial Poly(A)-specific ribonuclease PARN [Leptomonas pyrrhocoris] >gi|928119579|gb|KPA84035.1| putative mitochondrial Poly(A)-specific ribonuclease PARN [Leptomonas pyrrhocoris]) HSP 1 Score: 187.578 bits (475), Expect = 8.077e-48 Identity = 164/506 (32.41%), Postives = 233/506 (46.05%), Query Frame = 0
Query: 20 MDVTKATFADVLPEIEAALQNCEFVAVDFEMSGINLAGQPRITYADTM--QERYAQQRVVASRFKIIQMGISIVSKVEKTGSSGNSASHTLVACPYNFYTFAADGDD---------VILSLSAIHFLKDHGMDFNKWIQEGVSYTNAAREEELIKRLDCERERDEEEIKKPEGGAPGKTQMNLTKPADVEFMKKQMEVVKAWREES--------------------------------EILGGAESLSEEEKSEAARRRKELTLARTNAFMRRALFEAIEIYYPDLITESR----NNQVIVLRLSAAEKEERMAAREAARQSRRL-STVGMRLVFKAMSACARPIVVHNGFFDLLFMMAAFHKPLPEKLVDFKADVRACFPAGVYDTRLISTREDLLGKS-LGDKGLEGLCQALVQETPEGGVDLVLAEGFEKY-----------GGSERQAFAHEAGYDAYLTGAVFARMQVLLGDAGLE------KLKMMVFSFRSMFVTNLGE 459
M V + F V P + L+ C+F A+D EM+GIN+ P +T + T Q+ Y +R+ ASR+ IIQ+G+ + KV SS +S +H VA P+NF F DD V++S SA+ FL+ HGMDF KW+ +G+++ + RE L RL + E +G AP +Q+ A + E KAW EE E+ GG E++ + S AAR + L R +P L +R + V+ L + + E+ + A R RRL T+G RLVF + +P V HN F D LF+M A LPE+L +K VRA FP ++DTR +++R+DL + G L GL +A V +P V+L L GFE Y GGS AHEAGYDA +TG V LL +AG L + FRS++ N+ E
Sbjct: 1 MQVRRDNFPAVFPHFKELLETCDFYAMDEEMTGINV---PEVTESITFSPQDAYNSKRLAASRYSIIQVGVCLFRKVP---SSSSSVAH-YVAHPFNFLLFPQFKDDYTAEERAGDVVVSPSALAFLRKHGMDFQKWVYQGMAFCDGPREAALRARLAAQDEA--------KGTAP-SSQVAAAAAAAATPLFTDAE--KAWVEEGQKAAAALVSRVESSWAAAVSASAGRRPFLSSIEVAGGKEAVLPVQTSRAAREHLGVLLQRD---------------FPQLSFRARRAGPSGYVVTLVMLSPEEVAKQAWLTGQRSERRLLDTLGFRLVFSELVRSKKPCVGHNCFADWLFLMHAMDGALPEQLPQWKERVRALFPR-LWDTRYVASRQDLFPRGRFGSISLGGLYEAYVGASPHCMVELPL--GFEGYDPMTLLGTSTAGGSGSDP-AHEAGYDALMTGTVLLN---LLAEAGYTLGTAPADLSNKIALFRSLYAVNVEE 466 The following BLAST results are available for this feature:
BLAST of EWM30500.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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