EWM28856.1, cds1812 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28856.1 vs. NCBI_GenBank
Match: gi|585111283|gb|EWM28856.1| (lipase class 3 [Nannochloropsis gaditana]) HSP 1 Score: 873.618 bits (2256), Expect = 0.000e+0 Identity = 421/421 (100.00%), Postives = 421/421 (100.00%), Query Frame = 0
Query: 1 MDCCKSMTTRRSQSHHELMHDCLQAYQNDHSARIHAPENLKLILSIFLLPSLHCSFRSRKNTEKHMPLATIMLPAGLASLLLMSMVCLCRLPYSFAVEPYSEDLARQAAVFSSIAYGDPFLVSQNKFYNSSCQLPGFTVLHTYQSQPLDHDAFGYIGVDKEEKLVVVAFKGSNDTEDYITDLIGSLHYHFSCVIEGVDLGHTHHGFCAFYTSLVTLGLAEEVAALAARMGEEYTVLVTGHSLGGGVASLCAVDLGKRLNVSSLLYTFGEPRAGDVGFATAVAEYTRGSYRLVHASDCVPHLPPCCGGVDGGHCAEVADCPFHHGQEIWYDDDMSVGAQYVACPGDEDEDVCSNGSISSVEDHHYYFGERLGTWCCFPPPPSERSSEMERKHTMIEQRIKTLESHGRMSRSEAERTGVTAVV 421
MDCCKSMTTRRSQSHHELMHDCLQAYQNDHSARIHAPENLKLILSIFLLPSLHCSFRSRKNTEKHMPLATIMLPAGLASLLLMSMVCLCRLPYSFAVEPYSEDLARQAAVFSSIAYGDPFLVSQNKFYNSSCQLPGFTVLHTYQSQPLDHDAFGYIGVDKEEKLVVVAFKGSNDTEDYITDLIGSLHYHFSCVIEGVDLGHTHHGFCAFYTSLVTLGLAEEVAALAARMGEEYTVLVTGHSLGGGVASLCAVDLGKRLNVSSLLYTFGEPRAGDVGFATAVAEYTRGSYRLVHASDCVPHLPPCCGGVDGGHCAEVADCPFHHGQEIWYDDDMSVGAQYVACPGDEDEDVCSNGSISSVEDHHYYFGERLGTWCCFPPPPSERSSEMERKHTMIEQRIKTLESHGRMSRSEAERTGVTAVV
Sbjct: 1 MDCCKSMTTRRSQSHHELMHDCLQAYQNDHSARIHAPENLKLILSIFLLPSLHCSFRSRKNTEKHMPLATIMLPAGLASLLLMSMVCLCRLPYSFAVEPYSEDLARQAAVFSSIAYGDPFLVSQNKFYNSSCQLPGFTVLHTYQSQPLDHDAFGYIGVDKEEKLVVVAFKGSNDTEDYITDLIGSLHYHFSCVIEGVDLGHTHHGFCAFYTSLVTLGLAEEVAALAARMGEEYTVLVTGHSLGGGVASLCAVDLGKRLNVSSLLYTFGEPRAGDVGFATAVAEYTRGSYRLVHASDCVPHLPPCCGGVDGGHCAEVADCPFHHGQEIWYDDDMSVGAQYVACPGDEDEDVCSNGSISSVEDHHYYFGERLGTWCCFPPPPSERSSEMERKHTMIEQRIKTLESHGRMSRSEAERTGVTAVV 421
BLAST of EWM28856.1 vs. NCBI_GenBank
Match: gi|553188441|ref|XP_005854797.1| (lipase family protein [Nannochloropsis gaditana CCMP526] >gi|422294265|gb|EKU21565.1| lipase family protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 735.332 bits (1897), Expect = 0.000e+0 Identity = 356/356 (100.00%), Postives = 356/356 (100.00%), Query Frame = 0
Query: 66 MPLATIMLPAGLASLLLMSMVCLCRLPYSFAVEPYSEDLARQAAVFSSIAYGDPFLVSQNKFYNSSCQLPGFTVLHTYQSQPLDHDAFGYIGVDKEEKLVVVAFKGSNDTEDYITDLIGSLHYHFSCVIEGVDLGHTHHGFCAFYTSLVTLGLAEEVAALAARMGEEYTVLVTGHSLGGGVASLCAVDLGKRLNVSSLLYTFGEPRAGDVGFATAVAEYTRGSYRLVHASDCVPHLPPCCGGVDGGHCAEVADCPFHHGQEIWYDDDMSVGAQYVACPGDEDEDVCSNGSISSVEDHHYYFGERLGTWCCFPPPPSERSSEMERKHTMIEQRIKTLESHGRMSRSEAERTGVTAVV 421
MPLATIMLPAGLASLLLMSMVCLCRLPYSFAVEPYSEDLARQAAVFSSIAYGDPFLVSQNKFYNSSCQLPGFTVLHTYQSQPLDHDAFGYIGVDKEEKLVVVAFKGSNDTEDYITDLIGSLHYHFSCVIEGVDLGHTHHGFCAFYTSLVTLGLAEEVAALAARMGEEYTVLVTGHSLGGGVASLCAVDLGKRLNVSSLLYTFGEPRAGDVGFATAVAEYTRGSYRLVHASDCVPHLPPCCGGVDGGHCAEVADCPFHHGQEIWYDDDMSVGAQYVACPGDEDEDVCSNGSISSVEDHHYYFGERLGTWCCFPPPPSERSSEMERKHTMIEQRIKTLESHGRMSRSEAERTGVTAVV
Sbjct: 1 MPLATIMLPAGLASLLLMSMVCLCRLPYSFAVEPYSEDLARQAAVFSSIAYGDPFLVSQNKFYNSSCQLPGFTVLHTYQSQPLDHDAFGYIGVDKEEKLVVVAFKGSNDTEDYITDLIGSLHYHFSCVIEGVDLGHTHHGFCAFYTSLVTLGLAEEVAALAARMGEEYTVLVTGHSLGGGVASLCAVDLGKRLNVSSLLYTFGEPRAGDVGFATAVAEYTRGSYRLVHASDCVPHLPPCCGGVDGGHCAEVADCPFHHGQEIWYDDDMSVGAQYVACPGDEDEDVCSNGSISSVEDHHYYFGERLGTWCCFPPPPSERSSEMERKHTMIEQRIKTLESHGRMSRSEAERTGVTAVV 356
BLAST of EWM28856.1 vs. NCBI_GenBank
Match: gi|470380682|ref|XP_004333711.1| (lipase, putative [Acanthamoeba castellanii str. Neff] >gi|440790415|gb|ELR11698.1| lipase, putative [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 148.288 bits (373), Expect = 1.080e-37 Identity = 101/281 (35.94%), Postives = 136/281 (48.40%), Query Frame = 0
Query: 137 FTVLHTYQSQPLDHDAFGYIGVDKEEKLVVVAFKGSNDTEDYITDLIGSL----HYHFSCVIEGVDLGHTHHGFCAFYTSLVTLGLAEEVAALAARMGEEYTVLVTGHSLGGGVASLCAVDL------GKRLNVSSLLYTFGEPRAGDVGFATAVAEYTRGSYRLVHASDCVPHLPPCCGGVDG-GHC-AEVADCPFHHGQEIWYDDDMSVGAQYVACPGDEDEDVCSNGSISSVEDHHYYFGERLGTWCCFPPPPSERSSEMERKHTMIEQRIKTLESHG 405
F L T+ S DAF YIGVD + K ++VAFKG+N T D + D++ SL HY C I + H GFC +Y SL+ GL + ++ +Y V+ TGHSLGG +AS+ A G ++ V YTFG PR GD GFA A S+R+VH D V H+ PCC G G G C A+ CPFH G E +Y D M+ + +C V H YFG R+G + P P+ R+ ++ L +HG
Sbjct: 35 FHPLQTFASTAETSDAFAYIGVDDDRKEIIVAFKGTNGTLDALHDIVTSLDNVLHYVDLCEITSEVKFNIHKGFCWYYQSLLESGLMNAFVGVTSKF-PDYQVMATGHSLGGALASIFAFHAASSEPNGNQIKV----YTFGSPRVGDTGFAKAFNSLGIESWRVVHWKDIVVHMAPCCSGFFGLGPCDADGNGCPFHFGGEAFYGDGMN----------KDPLAICDLDLYEGVRYHVDYFGIRVGNFATVKPDPA-------REREQADELAAYLATHG 293
BLAST of EWM28856.1 vs. NCBI_GenBank
Match: gi|193207843|ref|NP_503390.2| (Uncharacterized protein CELE_F25A2.1 [Caenorhabditis elegans] >gi|373219760|emb|CCD69965.1| Uncharacterized protein CELE_F25A2.1 [Caenorhabditis elegans]) HSP 1 Score: 134.42 bits (337), Expect = 1.121e-32 Identity = 103/319 (32.29%), Postives = 156/319 (48.90%), Query Frame = 0
Query: 80 LLLMSMVCLCRLPYSFAVEPYSEDLARQAAVFSSI-AYGDPFLVSQNKFYNSSCQLPGFTVLHTYQSQP--------LDHDAFGYIGVDKEEKLVVVAFKGSNDTEDYITDLIGSLHYHFSCVIEGVDLGHTHHGFCAFYTSLVTLGLAEEVAALAARMGEEYTVLVTGHSLGGGVASLCAVDLGKRLNVSS---LLYTFGEPRAGDVGFATAVAEYTRGSYRLVHASDCVPHLPPCCGGVDGGHCAEVADCPFHHGQEIWYDDDMSVGAQYVACPGDEDEDVCSNGSISSV--EDHHYYFG---ERLGTWCCFPPPPS 381
+L + V +C+ +S + PYS+ L+R ++++I AY P SC F +Q +P LD G+ GVD E + ++VAF+G+N + + + ++ + + G GH F + + T G+ ++V +L +R Y V VTGHSLGG +ASL A L VS+ LL TFG+PR G++ FAT+V +YR+ H+ D VPHLP GH FHH E++Y+ +M + C DE E CSNG++ + EDH +YF +LG C PS
Sbjct: 1 MLFIFSVLICK-SFSHSSIPYSDQLSRNKLIYAAISAYASP---------PQSCMSLAF---QNFQVKPQITVACDTLDDTCSGFTGVDHESQAILVAFRGTNRNAQLLVEAVETVFANNKSWVSG---GHVSEYFSDAFFKIWTSGMKDDVISLMSRY-PSYQVWVTGHSLGGALASLAATYLRYTSLVSADQLLLVTFGQPRTGNMDFATSVDNLVPNAYRVTHSHDPVPHLP------GQGHHGY-----FHHKSEVYYNKNM---GGWEICEKDESEK-CSNGNLVDLDFEDHFHYFNLDILKLGFSNCLNTTPS 287
BLAST of EWM28856.1 vs. NCBI_GenBank
Match: gi|298711852|emb|CBJ32875.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 135.191 bits (339), Expect = 2.238e-31 Identity = 84/185 (45.41%), Postives = 107/185 (57.84%), Query Frame = 0
Query: 199 LGHTHHGFCAFYTSLVTLGLAEEVAALAARMGEEYTVLVTGHSLGGGVASLCAVDLGKRLNVSS---LLYTFGEPRAGDVGFATAVAEYTRGSYRLVHASDCVPHLPPCCGGVDGGHCAEVADCPFHHGQEIWYDDDMSVGAQYVACPGDEDEDVCSN--GSISSVEDHHYYFGERLGTWCCFPP 378
+G+ H GFC FY +LV GLA +V LA R YT+ VTGHSLGG A++CA DL +RL V+S +LYT GEPRAGD FA + E+ +YR+VH D VPHL CC G G CP+ H EI Y +DMS G+ ++ C ED + G S+ DH YF +G +C PP
Sbjct: 278 IGNVHFGFCEFYQTLVAEGLAAKVLHLA-RKHPTYTIFVTGHSLGGAAAAVCAADLVERLGVASERVVLYTLGEPRAGDGIFADGINEHVGTAYRIVHDKDLVPHLSLCCHGWLGKCIGGEEACPYQHSTEIVYANDMSDGSPWIQCNDTVGEDYACDPQGWDLSIADHVSYFARTVGQYCNTPP 461 HSP 2 Score: 64.3142 bits (155), Expect = 1.510e-7 Identity = 36/99 (36.36%), Postives = 55/99 (55.56%), Query Frame = 0
Query: 100 YSEDLARQAAVFSSIAYGDPFLVSQNKFYNSSC--QLPGFTVLHTYQSQPLDHDAFGYIGVDKEEKLVVVAFKGSNDTEDYITDLIGSLHYHFSCVIEG 196
Y EDL + A ++SS AY V + F N +C Q GF + ++ + D AF ++GVD + +VVAFKG+ D +D++T+L +HY C G
Sbjct: 31 YDEDLGKLAVIYSSAAYD---RVEEWVFANPACNEQTKGFVFVESFVGEHTD--AFSFVGVDTVGERIVVAFKGTTDVQDWVTNLRTWIHYTHRCAPAG 124
BLAST of EWM28856.1 vs. NCBI_GenBank
Match: gi|802670215|gb|KKA66791.1| (lipase [Pristionchus pacificus]) HSP 1 Score: 130.183 bits (326), Expect = 4.595e-31 Identity = 100/315 (31.75%), Postives = 152/315 (48.25%), Query Frame = 0
Query: 77 LASLLLMSMVC---LCRLPYSFAVEPYSEDLARQAAV-FSSIAYGDP---FLVSQNKFYNSSCQLPGFTVLHTYQSQPLDHDAF------GYIGVDKEEKLVVVAFKGSNDTEDYITDLIGSLHYHFSCVIEGVDLGHTHHGFCAFYTSLVTLGLAEEVAALAARMGEEYTVLVTGHSLGGGVASLCAVDLGKRLNVSS---LLYTFGEPRAGDVGFATAVAEYTRGSYRLVHASDCVPHLPPCCGGVDGGHCAEVADCPFHHGQEIWYDDDMSVGAQYVACPGDEDEDVCSNGSI--SSVEDHHYYFGERLGTW 373
+ SLLL+ C L L A ++ED AR + SS AY D L SQ K S Q+ L D F G+ D+ K++ +AF+G++DT I ++ ++ F ++ D G T F + GL ++ ALAA+ YTV VTGHSLGG +AS+ A + S +LYTFG+PR GD +A + + ++R+ H+ D V H+PP + HH E+WYD+DM+ GA YV C G +++ CS+ + +S +DH +Y+G+ + W
Sbjct: 3 MRSLLLVLAACSTALATLLQQSAAARFNEDTARSIMLPISSAAYSDKPQACLSSQLKTAKLSKQVS------------LKCDYFKKDTCSGFTFFDETRKVIGIAFRGTSDTSQLIAEITDTI---FDSKVDFQDGGKTSKYFNDAFMDTWNGGLGDDFLALAAKY-PSYTVWVTGHSLGGALASMAAAHISANKIASKDKIVLYTFGQPRTGDQKYAD-IHDDLVTAFRVTHSKDIVAHIPPQFMNYE------------HHTSEVWYDNDMAAGASYVVC-GKQEDKRCSDKHVFNTSPDDHTHYYGKEVSEW 287
BLAST of EWM28856.1 vs. NCBI_GenBank
Match: gi|560123859|emb|CDJ91516.1| (Lipase domain containing protein [Haemonchus contortus]) HSP 1 Score: 127.102 bits (318), Expect = 1.212e-29 Identity = 87/230 (37.83%), Postives = 115/230 (50.00%), Query Frame = 0
Query: 149 DHDAFGYIGVDKEEKLVVVAFKGSNDTEDYITDLIGSLHYHFSCVIEGVDLGHTHHGFCAFYTSLVTLGLAEEVAALAARMGEEYTVLVTGHSLGGGVASLCAVDLGKRLNVSS----LLYTFGEPRAGDVGFATAVAEYTRGSYRLVHASDCVPHLPPCCGGVDGGHCAEVADCPFHHGQEIWYDDDMSVGAQYVACPGDEDEDVCSNGSISSV-EDHHYYFGERLGTW 373
D + GY D EK +++AF+G+ D +TD I S H + D GH F + L GL ++V L + Y VTGHSLG +AS+CA L K N+++ L TFG+PR GD FA +YR+VH D VPH+PP G AD FHH E+WY++DM+VG Y C + D D CSN IS+ DH Y+ LG W
Sbjct: 115 DVNCHGYTAWDPVEKAIIIAFRGT-DGSFQMTDEIMSFFLH---RVPFFDNGHLFKYFHDAFFFLWNGGLEQQVRTLKYQY-PNYKFYVTGHSLGASIASICASYLVK-FNMTTPENLRLVTFGQPRTGDYDFAAWHEATFPYAYRIVHHRDPVPHIPPMIG----------ADQVFHHRFEVWYNNDMAVGQPYTVC-KESDGDYCSNTVISTEGSDHDSYYNRDLGRW 327
BLAST of EWM28856.1 vs. NCBI_GenBank
Match: gi|597864585|gb|EYC13986.1| (hypothetical protein Y032_0042g646 [Ancylostoma ceylanicum]) HSP 1 Score: 124.79 bits (312), Expect = 1.032e-28 Identity = 82/225 (36.44%), Postives = 119/225 (52.89%), Query Frame = 0
Query: 154 GYIGVDKEEKLVVVAFKGSNDTEDYITDLIGSLHYHFSCVIEGVDLGHTHHGFCAFYTSLVTLGLAEEVAALAARMGEEYTVLVTGHSLGGGVASLCAVDLGKRLNVSS----LLYTFGEPRAGDVGFATAVAEYTRGSYRLVHASDCVPHLPPCCGGVDGGHCAEVADCPFHHGQEIWYDDDMSVGAQYVACPGDEDEDVCSNGSIS-SVEDHHYYFGERLGTW 373
GY D EK V+++F+G+ D + +TD I S F+ + + G+ F + L GL ++V L + +Y V +TGHS+G +A++ A L K N+ + L TFG+PRAGD FAT +YR+VH +D VPH+PP G D FHH E+WY++DM+VG Y C + D D CSN IS + +H YYF + +G W
Sbjct: 120 GYTAWDPVEKAVIISFEGT-DGSNQMTDEILSF---FANKVAFFNNGYLFKYFHNAFFFLWNGGLEQQVRTLKYQY-PDYKVYITGHSMGAAIATITASYLVK-WNMWTPENVRLVTFGQPRAGDYDFATWHDTTFPYAYRIVHQNDPVPHIPPRLG----------RDKLFHHRYEVWYNNDMAVGQPYTIC-QEADGDYCSNTVISDAFSEHLYYFDKNIGDW 327
BLAST of EWM28856.1 vs. NCBI_GenBank
Match: gi|597864588|gb|EYC13989.1| (hypothetical protein Y032_0042g648 [Ancylostoma ceylanicum]) HSP 1 Score: 119.783 bits (299), Expect = 1.392e-26 Identity = 82/230 (35.65%), Postives = 117/230 (50.87%), Query Frame = 0
Query: 149 DHDAFGYIGVDKEEKLVVVAFKGSNDTEDYITDLIGSLHYHFSCVIEGVDLGHTHHGFCAFYTSLVTLGLAEEVAALAARMGEEYTVLVTGHSLGGGVASLCAVDLGKRLNVSS----LLYTFGEPRAGDVGFATAVAEYTRGSYRLVHASDCVPHLPPCCGGVDGGHCAEVADCPFHHGQEIWYDDDMSVGAQYVACPGDEDEDVCSNGSISSVE-DHHYYFGERLGTW 373
D +GY D EK V++AF+G++ T +TD I S F + D G+ F + L GL ++V L + +Y V +TGHSLG +A++ A L K N+ + L T+G+PR GD FAT +YR++H D VPH+PP G D FHH E+WY+++M+VG Y C + D D CSN IS+ +H +YF LG W
Sbjct: 153 DVHCYGYTAWDPVEKAVIIAFEGTS-TPFQMTDEILSF---FVNKVAFFDNGYLFKYFHDAFFFLWNGGLEQQVRTLKYQY-PDYKVYITGHSLGASIATITASYLVK-WNMWTPENVRLITYGQPRTGDYDFATWHDATFPYAYRIIHHRDPVPHIPPRLG----------RDKMFHHRYEVWYNNNMAVGKPYTIC-QEADGDYCSNTVISAESWEHMWYFDRNLGEW 365
BLAST of EWM28856.1 vs. NCBI_GenBank
Match: gi|597864587|gb|EYC13988.1| (hypothetical protein Y032_0042g648 [Ancylostoma ceylanicum]) HSP 1 Score: 119.783 bits (299), Expect = 1.542e-26 Identity = 82/230 (35.65%), Postives = 117/230 (50.87%), Query Frame = 0
Query: 149 DHDAFGYIGVDKEEKLVVVAFKGSNDTEDYITDLIGSLHYHFSCVIEGVDLGHTHHGFCAFYTSLVTLGLAEEVAALAARMGEEYTVLVTGHSLGGGVASLCAVDLGKRLNVSS----LLYTFGEPRAGDVGFATAVAEYTRGSYRLVHASDCVPHLPPCCGGVDGGHCAEVADCPFHHGQEIWYDDDMSVGAQYVACPGDEDEDVCSNGSISSVE-DHHYYFGERLGTW 373
D +GY D EK V++AF+G++ T +TD I S F + D G+ F + L GL ++V L + +Y V +TGHSLG +A++ A L K N+ + L T+G+PR GD FAT +YR++H D VPH+PP G D FHH E+WY+++M+VG Y C + D D CSN IS+ +H +YF LG W
Sbjct: 162 DVHCYGYTAWDPVEKAVIIAFEGTS-TPFQMTDEILSF---FVNKVAFFDNGYLFKYFHDAFFFLWNGGLEQQVRTLKYQY-PDYKVYITGHSLGASIATITASYLVK-WNMWTPENVRLITYGQPRTGDYDFATWHDATFPYAYRIIHHRDPVPHIPPRLG----------RDKMFHHRYEVWYNNNMAVGKPYTIC-QEADGDYCSNTVISAESWEHMWYFDRNLGEW 374 The following BLAST results are available for this feature:
BLAST of EWM28856.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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