EWM28854.1, cds1811 (CDS) Nannochloropsis gaditana

Overview
NameEWM28854.1
Unique Namecds1811
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:217093..218043 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28854.1
ProductDerlin
Orig transcript idgnl|cribi|Naga_100133g6.1508.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:217093..218043 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0004252serine-type endopeptidase activity
GO:0005515protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR009060UBA-like
IPR022764Peptidase_S54_rhomboid_dom
IPR000449UBA/Ts_N
IPR007599DER1
IPR015940UBA/transl_elong_EF1B_N_euk
Homology
BLAST of EWM28854.1 vs. NCBI_GenBank
Match: gi|585111281|gb|EWM28854.1| (Derlin [Nannochloropsis gaditana])

HSP 1 Score: 627.091 bits (1616), Expect = 0.000e+0
Identity = 316/316 (100.00%), Postives = 316/316 (100.00%), Query Frame = 0
Query:    1 MGALAGFVNAPVTKGYCLLVVGASLLSSYTHSSHTLRLDTTRILRKGELWRLFTSQIAFQEHPQTVLGVFLLYTFRHFERQMGSRKFGSFLVLSTLLATSTEMAIAGWLGGKGRIGEGLALSPGPFGVVYALFVLFYTTVPKLHPRLLRVCGADLSDKSMYYAVGAQLLLGGGWKTAIPALCGLFAGILYRRNVFGMQSVLLPQVLCRGVASVLEPLLQARRPTMRGRGGAERRRRRAGMAGREQLLPGGDRALGRGGGGGREGGQLAPPPPPPPASEDAIQMLMGLGFERGAVVRALQGADNNVEVAANRLLQGA 316
            MGALAGFVNAPVTKGYCLLVVGASLLSSYTHSSHTLRLDTTRILRKGELWRLFTSQIAFQEHPQTVLGVFLLYTFRHFERQMGSRKFGSFLVLSTLLATSTEMAIAGWLGGKGRIGEGLALSPGPFGVVYALFVLFYTTVPKLHPRLLRVCGADLSDKSMYYAVGAQLLLGGGWKTAIPALCGLFAGILYRRNVFGMQSVLLPQVLCRGVASVLEPLLQARRPTMRGRGGAERRRRRAGMAGREQLLPGGDRALGRGGGGGREGGQLAPPPPPPPASEDAIQMLMGLGFERGAVVRALQGADNNVEVAANRLLQGA
Sbjct:    1 MGALAGFVNAPVTKGYCLLVVGASLLSSYTHSSHTLRLDTTRILRKGELWRLFTSQIAFQEHPQTVLGVFLLYTFRHFERQMGSRKFGSFLVLSTLLATSTEMAIAGWLGGKGRIGEGLALSPGPFGVVYALFVLFYTTVPKLHPRLLRVCGADLSDKSMYYAVGAQLLLGGGWKTAIPALCGLFAGILYRRNVFGMQSVLLPQVLCRGVASVLEPLLQARRPTMRGRGGAERRRRRAGMAGREQLLPGGDRALGRGGGGGREGGQLAPPPPPPPASEDAIQMLMGLGFERGAVVRALQGADNNVEVAANRLLQGA 316          
BLAST of EWM28854.1 vs. NCBI_GenBank
Match: gi|294464565|gb|ADE77792.1| (unknown [Picea sitchensis])

HSP 1 Score: 171.4 bits (433), Expect = 8.955e-48
Identity = 106/311 (34.08%), Postives = 162/311 (52.09%), Query Frame = 0
Query:    5 AGFVNAPVTKGYCLLVVGASLLSSYTHSSHTLRLDTTRILRKGELWRLFTSQIAFQEHPQTVLGVFLLYTFRHFERQMGSRKFGSFLVLSTLLATSTEMAIAGWLGGKGRIGEGLALSPGPFGVVYALFVLFYTTVPKLHPRLLRVCGADLSDKSMYYAVGAQLLLGGGWKTAIPALCGLFAGILYRRNVFGMQSVLLPQVLCRGVASVLEPLLQARRPTMRGRGGAERRRRRAGMAGREQLLPGGDRALGRGGGGGREGGQLAPPPPPPPASEDAIQMLMGLGFERGAVVRALQGADNNVEVAANRLLQG 315
            +GF NAPVTKG   +   AS++++    +    L    I++K  LWRL TS   F    + + G++LLY FR FERQ+GS K+  F++ +T+ +T  E+ I      K  I  GLA  PGP+G++ +LFV F+  +P +  R  ++     SDKS  Y  G QLLL    ++ IP  CG+ AG+LYR N+F +Q + LP+++    + +  PL+     T+  R  A R    A +                  G   +G  +AP       SE+AI  L+ +GF+R + +RAL  A N++  AA+ LL  
Sbjct:    6 SGFQNAPVTKGLVFICGIASIIAATQGRASFSSLSYQAIVKKLHLWRLVTSVFVFSSTSELMFGLYLLYYFRVFERQIGSNKYSVFILFATIFSTLFELMILVLF--KDSISGGLA--PGPYGIIVSLFVPFFLDIP-VSTR-FQIFSVRFSDKSFVYLAGLQLLLSSWKRSLIPGFCGVLAGLLYRMNIFRIQRIKLPKLVASTASWLFAPLVSGGSSTISSRRTATRETIDAPL------------------GQQFQGNLVAPTMAE---SEEAISALVSMGFDRSSAIRALAQARNDINAAADLLLNS 289          
BLAST of EWM28854.1 vs. NCBI_GenBank
Match: gi|294460509|gb|ADE75831.1| (unknown [Picea sitchensis])

HSP 1 Score: 169.474 bits (428), Expect = 3.798e-47
Identity = 106/311 (34.08%), Postives = 162/311 (52.09%), Query Frame = 0
Query:    5 AGFVNAPVTKGYCLLVVGASLLSSYTHSSHTLRLDTTRILRKGELWRLFTSQIAFQEHPQTVLGVFLLYTFRHFERQMGSRKFGSFLVLSTLLATSTEMAIAGWLGGKGRIGEGLALSPGPFGVVYALFVLFYTTVPKLHPRLLRVCGADLSDKSMYYAVGAQLLLGGGWKTAIPALCGLFAGILYRRNVFGMQSVLLPQVLCRGVASVLEPLLQARRPTMRGRGGAERRRRRAGMAGREQLLPGGDRALGRGGGGGREGGQLAPPPPPPPASEDAIQMLMGLGFERGAVVRALQGADNNVEVAANRLLQG 315
            +GF NAPVTKG   +   AS++++    +    L    I++K  LWRL TS   F    + + G++LLY FR FERQ+GS K+  F++ +T+ +T  E+ I      K  I  GLA  PGP+G++ +LFV F+  +P +  R  ++     SDKS  Y  G QLLL    ++ IP  CG+ AG+LYR N+F +Q + LP+++    + +  PL+     T+  R  A R    A +                  G   +G  +AP       SE+AI  L+ +GF+R + +RAL  A N++  AA+ LL  
Sbjct:    6 SGFQNAPVTKGLVFICGIASIIAATQGRASFSSLSYQAIVKKLHLWRLGTSVFVFSSTSELMFGLYLLYYFRVFERQIGSNKYSVFILFATIFSTLFELMILVLF--KDSISGGLA--PGPYGIIVSLFVPFFLDIP-VSTR-FQIFSVRFSDKSFVYLAGLQLLLSSWKRSLIPGFCGVLAGLLYRMNIFRIQRIKLPKLVASTASWLFAPLVSGGSSTISSRRTATRETIDAPL------------------GQQFQGNLVAPTMAE---SEEAISALVSMGFDRSSAIRALAQARNDINAAADLLLNS 289          
BLAST of EWM28854.1 vs. NCBI_GenBank
Match: gi|168032238|ref|XP_001768626.1| (predicted protein [Physcomitrella patens] >gi|162680125|gb|EDQ66564.1| predicted protein [Physcomitrella patens])

HSP 1 Score: 166.392 bits (420), Expect = 5.743e-46
Identity = 109/312 (34.94%), Postives = 159/312 (50.96%), Query Frame = 0
Query:    5 AGFVNAPVTKGYCLLVVGASLLSSYTHSSHTLRLDTTRILRKGELWRLFTSQIAFQEHPQTVLGVFLLYTFRHFERQMGSRKFGSFLVLSTLLATSTEMAIAGWLGGKGRIGEGLALSPGPFGVVYALFVLFYTTVPKLHPRLLRVCGADLSDKSMYYAVGAQLLLGGGWKTAIPALCGLFAGILYRRNVFGMQSVLLPQVLCRGVASVLEPLLQARRPTMRGRGGAERRRRRAGMAGREQLLPGGDRALGRGGGGGREGGQLAPPPPPPPA-SEDAIQMLMGLGFERGAVVRALQGADNNVEVAANRLLQG 315
            +GF NAPVTKG  L    AS+L      +  L L   + ++K +LWRL TS   F   P+ + G++L+Y FR FERQ+GS K+  ++  ST  +T  E+A    +     +  G+ L+PGP+G+++A FV F+  +P +  RL +  GA  SDKS  Y  G QLLL    ++ +P +CGL AG+LY+ N+ G++ V  P+ L      +  PLL +                          LP   R  G    G     + AP  PP  A SE  I  LM +GF+R   ++AL  A N+V +A N LL+ 
Sbjct:    6 SGFHNAPVTKGIVLACGLASVLIGTQGGARALSLSYQKFVQKQQLWRLLTSPWVFSSTPEVLFGLYLVYFFRVFERQIGSNKYLFYVFFSTTTSTILEVAALAVIRDPTAL-TGIFLTPGPYGLIFASFVPFFFDIP-ISTRL-KFLGARFSDKSFVYLAGLQLLLSSWTQSLVPGVCGLLAGLLYKSNILGIRKVKFPEGLASAATRLFTPLLSS-----------------------NSTLPTTVR--GAAPNGRLLEHRFAPSAPPVSAQSEVHITTLMAMGFDRSDALQALAAARNDVALATNLLLES 289          
BLAST of EWM28854.1 vs. NCBI_GenBank
Match: gi|168026322|ref|XP_001765681.1| (predicted protein [Physcomitrella patens] >gi|162683107|gb|EDQ69520.1| predicted protein [Physcomitrella patens])

HSP 1 Score: 162.925 bits (411), Expect = 1.591e-44
Identity = 111/312 (35.58%), Postives = 166/312 (53.21%), Query Frame = 0
Query:    5 AGFVNAPVTKGYCLLVVGASLLSSYTHSSHTLRLDTTRILRKGELWRLFTSQIAFQEHPQTVLGVFLLYTFRHFERQMGSRKFGSFLVLSTLLATSTEMAIAGWLGGKGRIGEGLALSPGPFGVVYALFVLFYTTVPKLHPRLLRVCGADLSDKSMYYAVGAQLLLGGGWKTAIPALCGLFAGILYRRNVFGMQSVLLPQVLCRGVASVLEPLLQARRPTMRGRGGAERRRRRAGMAGREQLLPGGDRALGRGGGGGRE-GGQLAPPPPPPPASEDAIQMLMGLGFERGAVVRALQGADNNVEVAANRLLQG 315
            +GF NAPVTK   +    AS+L      +  L L   +I++K +LWRL +S   F    + + G++L+Y FR FERQ+GS K+  F++ ST+++T+ E+     L     +  G++L+PGP+G+++ALFV F+  +P +  R  +V GA  SDKS  Y  G QLLL    ++ IP +CGL AG LY+ NV G++ V  P+ L    A +  PLL +       RGG                     RA G+ G   +      APP   PP  E+ I  L+ +GF+R   ++AL  A N++ VA N LL+ 
Sbjct:    6 SGFHNAPVTKAIVMACGLASVLVGTQGGARALSLSYQKIVQKLQLWRLLSSPCVFSSTSELLFGLYLIYFFRVFERQIGSNKYLFFVLFSTIISTTLEVIALAALQDPTSL-TGISLTPGPYGLMFALFVPFFFDIP-ISTR-FKVFGARFSDKSFVYLAGLQLLLSSWKQSLIPGVCGLVAGFLYKSNVLGIKKVKFPEGLAAAAARLFAPLLSSNSAPPTARGG---------------------RASGQNGHAFQHRFAASAPPLTAPP--EEHIATLVAMGFDRSDAMQALAVARNDITVATNLLLES 291          
BLAST of EWM28854.1 vs. NCBI_GenBank
Match: gi|1067062968|ref|XP_018015377.1| (PREDICTED: ubiquitin-associated domain-containing protein 2-like [Hyalella azteca])

HSP 1 Score: 163.696 bits (413), Expect = 1.820e-44
Identity = 118/328 (35.98%), Postives = 181/328 (55.18%), Query Frame = 0
Query:    5 AGFVNAPVTKGY--CLLVVGASL-LSSYTHSSHTLRLDTTRILRKGELWRLFTSQIAFQEHPQTVLGVFLLYTFRHFERQMGSRKFGSFLV----LSTLLATSTEMAI--AGWLGGKGRIGEGLALSPGPFGVVYALFVLFYTTVPKLHPRLLRVCGADLSDKSMYYAVGAQLLLGGGWKTAIPALCGLFAGILYRRNVFGMQSV-LLPQVLCRGVASVLEPLLQARRP--TMRGRGGAERRRRRAGMAGREQLLPGGDRALGRGGGGGREGGQ----LAPPPPPPPASEDAIQMLMGLGFERGAVVRALQGADNNVEVAANRLLQGA 316
             GF NAPVTKG   CL +   SL +  + H    L  +   ++ KGE+WR+  ++++F +    V+G  L+Y FR FER+ GS KF S+L+    ++TLL T T +++  AG+      +  G  L PGP+G+++ LFV +Y  +P  H    RV G  ++ K++ Y +G QL       TAI ALCG+ +G++YR NV  +Q +  +P V+ R  A+ L PLL +  P  T+ G     +R+    +  ++ L+    R +   G  GR  G        P PPPP SED IQ L+ +GF+R  V+ AL+ + N+V  A++ LLQ A
Sbjct:   11 TGFYNAPVTKGLMGCLFLTCTSLNVPLFAHLRRYLICNLPEVISKGEIWRILLAKLSFVDMKDLVVGFLLMYYFRIFERRYGSHKFASYLIANQCVTTLLETVTVLSLHYAGF-----DLHNGGHLPPGPYGLIFPLFVSYYCDIP--HVAQTRVLGVPITGKTLTYLLGLQLAYTSP-ATAISALCGVVSGLIYRHNVLYIQRLTFIPAVVGRFAAATLGPLLASAPPQETLTGATLELQRQEEMELWDQQMLMRQRGRHMQMEGDEGRRAGAELNGFLNPQPPPPPSEDQIQTLVAMGFDRQRVLSALRDSHNDVNTASHILLQQA 330          
BLAST of EWM28854.1 vs. NCBI_GenBank
Match: gi|301103025|ref|XP_002900599.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262101862|gb|EEY59914.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 158.688 bits (400), Expect = 1.229e-42
Identity = 122/335 (36.42%), Postives = 161/335 (48.06%), Query Frame = 0
Query:    2 GALAGFVNAPVTKGYCLLVVGASLLSSYTHSSHTLRLDTTRILRKGELWRLFTSQIAFQEHPQTVLGVFLLYTFRHFERQMGSRKFGSFLVLSTLLATSTEMAI---AGWLGGKGRIGEGLALSPGPFGVVYALFVLFYTTVPKLHPRLLRVCGADLSDKSMYYAVGAQLLLGGGWKTAIPALCGLFAGILYRRNVFGMQSVLLPQVLCRGVASVLEPLLQ----ARRPTMRGRGGAERRRRRAGMAGREQLLPGGDRALGRG--------------GGGGREGGQLAPPPPPPPASEDAIQMLMGLGFERGAVVRALQGADNNVEVAANRLLQG 315
            G L GF  APVT  + L V  AS  S      H L LD   IL + + WRL +SQ+ F       LG++ ++ FR  ERQ+GSRKFGS LV   L++ + ++A    + WL           +  GP+ ++ A  V F   +PKLHPR   V G   SDKS  Y +   +L    ++  IP + G F G+L+R    G   + LP  +C  +  +L PL +    +     R R   E +RR      R    PG     G+G              GG    GG L P     P SEDAIQ LM LGF+R   ++ALQ  DNNVE AANRLL G
Sbjct:    3 GDLRGFYGAPVTYAFSLAVGAASSASLLLDRGHLLALDRDAILSRSQYWRLISSQLTFHHGLAVSLGLYTVFQFRVLERQLGSRKFGSILVFVLLISGALQLAALTSSPWLAK--------TIPGGPYPIIGAFAVYFNKFIPKLHPRSFSVWGLHFSDKSSTYML-MLVLFVRDFRALIPFMGGSFLGLLFRSTPLG--RLQLPSFVC-SILGLLHPLFKVVPASTLALQRQRRALEAQRRVNARFNRR---PGAPAVQGQGFRDQLLPGAGGAMPGGAPAAGGMLLPHMAAQPPSEDAIQQLMALGFDRERALQALQTTDNNVEAAANRLLNG 322          
BLAST of EWM28854.1 vs. NCBI_GenBank
Match: gi|673026398|ref|XP_008867160.1| (hypothetical protein H310_04548 [Aphanomyces invadans] >gi|574477207|gb|ETW04204.1| hypothetical protein H310_04548 [Aphanomyces invadans])

HSP 1 Score: 157.147 bits (396), Expect = 3.316e-42
Identity = 111/320 (34.69%), Postives = 156/320 (48.75%), Query Frame = 0
Query:    4 LAGFVNAPVTKGYCLLVVGASLLSSYTHSSHTLRLDTTRILRKGELWRLFTSQIAFQEHPQTVLGVFLLYTFRHFERQMGSRKFGSFLVLSTLLATSTEMAIAGWLGGKGRIGEGLALSPGPFGVVYALFVLFYTTVPKLHPRLLRVCGADLSDKSMYYAVGAQLLLGGGWKTAIPALCGLFAGILYRRNVFGMQSVLLPQVLCRGVASVLEPLLQARRPTM----RGRGGAERRRRRAGMAGR---EQLLPGGDRALGRGGGGGREGGQLAPPPPPPPASEDAIQMLMGLGFERGAVVRALQGADNNVEVAANRLLQGA 316
            L+GF   PVT  Y      AS+ + +    H L LD   + +  + WRL T   A         G+++L+ FR  ERQ GS KFG+F++L  +L TST + +  WL         L  +PGP+ ++ AL V++Y  VP L PRL  + G +++DKS  Y + + + L   + TA P   G+  G+LY+     +  + +P  L      V  P+      T+    R R   E +RR+A   GR    Q +  G R     G G     Q  PP      SEDAI  L GLGF+R   + ALQ +DNNVE AANRLL   
Sbjct:    5 LSGFYKTPVTYAYLSATGMASVAALFMDMRHQLTLDLVSVTKLSQYWRLLTCHFALDNGIAVAFGMYVLFQFRVIERQFGSNKFGTFIIL--VLLTSTALQV--WL--------KLPTTPGPYPLIGALAVIYYHNVPLLQPRLYSLLGLNVTDKSSIYGLLSLVCL-RSYSTAFPFATGVLVGLLYQSKYLPLSKLRVPGFLA-WFFEVFHPIFMVVPATVLQQQRQRHLLEAQRRQATAIGRGHSHQEVGHGFRDQLIPGMGQAPFHQRMPP------SEDAISQLTGLGFDRDRAIAALQASDNNVEAAANRLLNAT 304          
BLAST of EWM28854.1 vs. NCBI_GenBank
Match: gi|1173960606|gb|OQS06718.1| (hypothetical protein THRCLA_01258 [Thraustotheca clavata])

HSP 1 Score: 155.992 bits (393), Expect = 8.544e-42
Identity = 110/322 (34.16%), Postives = 154/322 (47.83%), Query Frame = 0
Query:    4 LAGFVNAPVTKGYCLLVVGASLLSSYTHSSHTLRLDTTRILRKGELWRLFTSQIAFQEHPQTVLGVFLLYTFRHFERQMGSRKFGSFLVLSTLLATSTEMAIAGWLGGKGRIGEGLALSPGPFGVVYALFVLFYTTVPKLHPRLLRVCGADLSDKSMYYAVGAQLLLGGGWKTAIPALCGLFAGILYRRNVFGMQSVLLPQVLCRGVASVLEPLLQ----ARRPTMRGRGGAERRRRRAGMAG------REQLLPGGDRALGRGGGGGREGGQLAPPPPPPPASEDAIQMLMGLGFERGAVVRALQGADNNVEVAANRLLQG 315
            L G    PVT  Y       S  + +    + + LD  +I ++ + WRL TS   F +      G++L+++ R  ERQ GS+KFGSF+VL   L++  ++ +  +   K       +++ GP+ ++ AL VL++  VPKL P  +R  G   SDKS  Y +   L+   G  T  P L G+  G+LY+     +    LP  LC     +  P+      A     R R   E +RR A M        REQL+P      G GGG          P P  P SE AI+ L  LGFER   + AL+ ADNNVE AANRLL G
Sbjct:    6 LGGLYKTPVTYAYMSATGLMSAAAIFFDRPNEMHLDLRKIGKQSQYWRLLTSHFGFGDGVAVAFGIYLIFSCRVLERQFGSKKFGSFVVLVMTLSSLLQIGLLKFKFVK-------SIASGPYALIGALMVLYFGNVPKLQPHFVRAMGIAFSDKSPTYFMMC-LVCFRGIDTITPFLTGVLVGLLYQTKSLPLHKFRLPSFLC-WFFEIFHPIFMVVPAAAAVQQRQRQLQEMQRRAAAMGQPNGQGFREQLIP------GMGGGM---------PIPVAPPSEAAIEQLTALGFEREQAIAALRTADNNVEAAANRLLNG 303          
BLAST of EWM28854.1 vs. NCBI_GenBank
Match: gi|971506824|dbj|GAQ91389.1| (hypothetical protein KFL_007760080 [Klebsormidium nitens])

HSP 1 Score: 154.066 bits (388), Expect = 8.535e-41
Identity = 122/337 (36.20%), Postives = 167/337 (49.55%), Query Frame = 0
Query:    5 AGFVNAPVTKGYCLLVVGASLLSSYTHSSHTLRLDTTRILRKGELWRLFTSQIAFQEHPQTVLGVFLLYTFRHFERQMGSRKFGSFLVLSTLLATSTEMAIAGWLGGKGRIGEGLALSPGPFGVVYALFVLFYTTVPKLHPRLLRVCGADLSDKSMYYAVGAQLLLGGGWKTAIPALCGLFAGILYRRNVFGMQSVLLPQVLCRGVASVLEPLLQARRPTMRGRGGAERRRRRAGMAGREQLLPGGDRALGRGGGGGREGGQ---------------LAPPP-----------PPPPASEDAIQMLMGLGFERGAVVRALQGADNNVEVAANRLLQG 315
            +GF NAPVTK   L   G SLL     ++  L L    I R+ ELWRL TS   F   P+ + G++L+Y FR FERQ+GS K+  F + ST+L+T+ ++A    L G+   G+ L L  GP+G+++A FV F+  +P +  R   V     SDKS  Y  G QLLL  G ++ IP + GL AG+ YR NVFG++ +  P  +   V      L+    PT  G        R AG        PG    + R  GG  +G                 LAP             P PP  E+A+Q L+ +GF+R   VRAL  A N+V +A N LL+G
Sbjct:    6 SGFYNAPVTKAIILTSAGLSLLGGLHGTARLLSLSYECIFRRHELWRLLTSATIFSSTPEILFGLYLVYFFRIFERQVGSNKYTIFALSSTILSTAFQLASLVALEGRFS-GDLLTLCSGPYGLIFASFVPFFFDIP-VSAR-FSVMSLKFSDKSFVYLAGLQLLLSSGRQSIIPGISGLLAGLTYRSNVFGIRRLKFPDFISSFVERTFSFLISRTPPTASG-------GRVAGPGA-----PGTGPTIARRLGGPSQGFSDQLIGGNGGLPGGPFLAPQTGLGVAATAAASPAPPPPEEAVQTLVSMGFDRSQAVRALAQARNDVHMATNLLLEG 327          
The following BLAST results are available for this feature:
BLAST of EWM28854.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111281|gb|EWM28854.1|0.000e+0100.00Derlin [Nannochloropsis gaditana][more]
gi|294464565|gb|ADE77792.1|8.955e-4834.08unknown [Picea sitchensis][more]
gi|294460509|gb|ADE75831.1|3.798e-4734.08unknown [Picea sitchensis][more]
gi|168032238|ref|XP_001768626.1|5.743e-4634.94predicted protein [Physcomitrella patens] >gi|1626... [more]
gi|168026322|ref|XP_001765681.1|1.591e-4435.58predicted protein [Physcomitrella patens] >gi|1626... [more]
gi|1067062968|ref|XP_018015377.1|1.820e-4435.98PREDICTED: ubiquitin-associated domain-containing ... [more]
gi|301103025|ref|XP_002900599.1|1.229e-4236.42conserved hypothetical protein [Phytophthora infes... [more]
gi|673026398|ref|XP_008867160.1|3.316e-4234.69hypothetical protein H310_04548 [Aphanomyces invad... [more]
gi|1173960606|gb|OQS06718.1|8.544e-4234.16hypothetical protein THRCLA_01258 [Thraustotheca c... [more]
gi|971506824|dbj|GAQ91389.1|8.535e-4136.20hypothetical protein KFL_007760080 [Klebsormidium ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1815rna1815Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications