EWM28876.1, cds1801 (CDS) Nannochloropsis gaditana

Overview
NameEWM28876.1
Unique Namecds1801
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:199342..201000 +

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Properties
Property NameValue
Protein idEWM28876.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100095g14.10168.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:199342..201000 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM28876.1 vs. NCBI_GenBank
Match: gi|585111308|gb|EWM28876.1| (hypothetical protein Naga_100095g14 [Nannochloropsis gaditana])

HSP 1 Score: 1140.95 bits (2950), Expect = 0.000e+0
Identity = 552/552 (100.00%), Postives = 552/552 (100.00%), Query Frame = 0 
Query:    1 MSHKNRTGKDCDHKDGLDSLLEECAVFVAPHPSSDEKMAPDSNCMNVTEEDEWDDWETTKEPILSSTSDCSSSPLQPTLDEARVKFFQGQLQKYIQDLADPYILQEIESDLAKKHYKDFIEYFTDKPHMAQYTLDHELTRMSYKLVRSSGAPDRHHTYQDDMIVESYQRNSRKDSNYQHGPVDFSVSNPTEGNEFPVPKLYVLAEDDPASIRAIHAICAQNLTWRFANQILFADMLETIQRRFFRADLEVGVVSRDSKFVVDVDADSVEGTAIFHISLAGGTDGPVEVARLQGRIKVEVKKQCLVQCVKLMRLLPVFDDTLARVASALVKHEHGAQEGREGEEGGWGWKTTSHFPLTTLKKEMLAAGEGLMQAVTTVGKVLEEVAAEAALDERLQQGKGPESPEESCSIEEELKGSTDDPRRGCTFARGSEKGGGIVHVARDKREKGREGGQEGGRGPTGALGWLQASESMLEGVVGGLGSLIGASGSQSGFGFHLPRGARVPPSPFSSKWVGAGSGGNGEEELERVQLYRREGEGEREKGTEVGGMDACEA 552
            MSHKNRTGKDCDHKDGLDSLLEECAVFVAPHPSSDEKMAPDSNCMNVTEEDEWDDWETTKEPILSSTSDCSSSPLQPTLDEARVKFFQGQLQKYIQDLADPYILQEIESDLAKKHYKDFIEYFTDKPHMAQYTLDHELTRMSYKLVRSSGAPDRHHTYQDDMIVESYQRNSRKDSNYQHGPVDFSVSNPTEGNEFPVPKLYVLAEDDPASIRAIHAICAQNLTWRFANQILFADMLETIQRRFFRADLEVGVVSRDSKFVVDVDADSVEGTAIFHISLAGGTDGPVEVARLQGRIKVEVKKQCLVQCVKLMRLLPVFDDTLARVASALVKHEHGAQEGREGEEGGWGWKTTSHFPLTTLKKEMLAAGEGLMQAVTTVGKVLEEVAAEAALDERLQQGKGPESPEESCSIEEELKGSTDDPRRGCTFARGSEKGGGIVHVARDKREKGREGGQEGGRGPTGALGWLQASESMLEGVVGGLGSLIGASGSQSGFGFHLPRGARVPPSPFSSKWVGAGSGGNGEEELERVQLYRREGEGEREKGTEVGGMDACEA
Sbjct:    1 MSHKNRTGKDCDHKDGLDSLLEECAVFVAPHPSSDEKMAPDSNCMNVTEEDEWDDWETTKEPILSSTSDCSSSPLQPTLDEARVKFFQGQLQKYIQDLADPYILQEIESDLAKKHYKDFIEYFTDKPHMAQYTLDHELTRMSYKLVRSSGAPDRHHTYQDDMIVESYQRNSRKDSNYQHGPVDFSVSNPTEGNEFPVPKLYVLAEDDPASIRAIHAICAQNLTWRFANQILFADMLETIQRRFFRADLEVGVVSRDSKFVVDVDADSVEGTAIFHISLAGGTDGPVEVARLQGRIKVEVKKQCLVQCVKLMRLLPVFDDTLARVASALVKHEHGAQEGREGEEGGWGWKTTSHFPLTTLKKEMLAAGEGLMQAVTTVGKVLEEVAAEAALDERLQQGKGPESPEESCSIEEELKGSTDDPRRGCTFARGSEKGGGIVHVARDKREKGREGGQEGGRGPTGALGWLQASESMLEGVVGGLGSLIGASGSQSGFGFHLPRGARVPPSPFSSKWVGAGSGGNGEEELERVQLYRREGEGEREKGTEVGGMDACEA 552
The following BLAST results are available for this feature:
BLAST of EWM28876.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585111308|gb|EWM28876.1|0.000e+0100.00hypothetical protein Naga_100095g14 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1805rna1805Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications