EWM28875.1, cds1796 (CDS) Nannochloropsis gaditana

Overview
NameEWM28875.1
Unique Namecds1796
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:179627..180601 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28875.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100095g8.10167.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:179627..180601 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM28875.1 vs. NCBI_GenBank
Match: gi|585111307|gb|EWM28875.1| (hypothetical protein Naga_100095g8 [Nannochloropsis gaditana])

HSP 1 Score: 668.692 bits (1724), Expect = 0.000e+0
Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 0
Query:    1 MRPAFHSHRADLFETAPGDRGELLVLCAACVGTSGVCQRLFTSSAHFPPYPSPQVHSHRRRTFAAAFIMASVISSPKKEASVMSEPSTFPDGPGRASPGLALPRLRMSVSDTPGILCRPLLLPSISNQLNMEDASKNTLSNKTWQTSLTEEEREVVRLKIMAAYKRQAKTYEDVLNVAAALQEEECFGRAPSRLDYIKDTVQFSHRLGEAKKKLVSGRGKGSGAEKQAEVKEKEPTHSDTGGTRKRGRSEAVEINTVSDKQIKEGHGAGEGENSKKKRGEKGQTRGREQDPCTRLEGGSNTSAKFTMNAAGCRGKISEQPKGKE 324
            MRPAFHSHRADLFETAPGDRGELLVLCAACVGTSGVCQRLFTSSAHFPPYPSPQVHSHRRRTFAAAFIMASVISSPKKEASVMSEPSTFPDGPGRASPGLALPRLRMSVSDTPGILCRPLLLPSISNQLNMEDASKNTLSNKTWQTSLTEEEREVVRLKIMAAYKRQAKTYEDVLNVAAALQEEECFGRAPSRLDYIKDTVQFSHRLGEAKKKLVSGRGKGSGAEKQAEVKEKEPTHSDTGGTRKRGRSEAVEINTVSDKQIKEGHGAGEGENSKKKRGEKGQTRGREQDPCTRLEGGSNTSAKFTMNAAGCRGKISEQPKGKE
Sbjct:    1 MRPAFHSHRADLFETAPGDRGELLVLCAACVGTSGVCQRLFTSSAHFPPYPSPQVHSHRRRTFAAAFIMASVISSPKKEASVMSEPSTFPDGPGRASPGLALPRLRMSVSDTPGILCRPLLLPSISNQLNMEDASKNTLSNKTWQTSLTEEEREVVRLKIMAAYKRQAKTYEDVLNVAAALQEEECFGRAPSRLDYIKDTVQFSHRLGEAKKKLVSGRGKGSGAEKQAEVKEKEPTHSDTGGTRKRGRSEAVEINTVSDKQIKEGHGAGEGENSKKKRGEKGQTRGREQDPCTRLEGGSNTSAKFTMNAAGCRGKISEQPKGKE 324          
BLAST of EWM28875.1 vs. NCBI_GenBank
Match: gi|675192493|ref|XP_008905131.1| (hypothetical protein PPTG_11742 [Phytophthora parasitica INRA-310] >gi|566024539|gb|ETI47450.1| hypothetical protein F443_08367 [Phytophthora parasitica P1569] >gi|567961835|gb|ETK87372.1| hypothetical protein L915_08199 [Phytophthora parasitica] >gi|567990561|gb|ETL40789.1| hypothetical protein L916_08123 [Phytophthora parasitica] >gi|568019781|gb|ETL93922.1| hypothetical protein L917_08021 [Phytophthora parasitica] >gi|568050231|gb|ETM47186.1| hypothetical protein L914_08085 [Phytophthora parasitica] >gi|568094522|gb|ETN09298.1| hypothetical protein PPTG_11742 [Phytophthora parasitica INRA-310] >gi|570328200|gb|ETO76148.1| hypothetical protein F444_08426 [Phytophthora parasitica P1976] >gi|570951975|gb|ETP17232.1| hypothetical protein F441_08352 [Phytophthora parasitica CJ01A1] >gi|570986170|gb|ETP45272.1| hypothetical protein F442_08309 [Phytophthora parasitica P10297] >gi|970635419|gb|KUF80311.1| hypothetical protein AM587_10016929 [Phytophthora nicotianae])

HSP 1 Score: 69.707 bits (169), Expect = 3.185e-10
Identity = 34/71 (47.89%), Postives = 44/71 (61.97%), Query Frame = 0
Query:  144 WQTSLTEEEREVVRLKIMAAYKRQAKTYEDVLNVAAALQEEECFGRAPSRLDYIKDTVQFSHRLGEAKKKL 214
            W+  LT EER+ VR KI  AY  +  TYED+L VA A++EE     APSRLDY K   +F +R+   K +L
Sbjct:  129 WRMYLTIEERQAVRSKIRDAYTSRCSTYEDLLQVACAIEEELLHISAPSRLDYFKSGFEFENRVKLKKDQL 199          
BLAST of EWM28875.1 vs. NCBI_GenBank
Match: gi|669166328|ref|XP_008618726.1| (hypothetical protein SDRG_14380 [Saprolegnia diclina VS20] >gi|530729554|gb|EQC27796.1| hypothetical protein SDRG_14380 [Saprolegnia diclina VS20])

HSP 1 Score: 69.3218 bits (168), Expect = 5.392e-10
Identity = 33/71 (46.48%), Postives = 46/71 (64.79%), Query Frame = 0
Query:  144 WQTSLTEEEREVVRLKIMAAYKRQAKTYEDVLNVAAALQEEECFGRAPSRLDYIKDTVQFSHRLGEAKKKL 214
            W+T LT EER+ VR KI  AY    KTYE++L  A+A++EE     APSRLDY K   +F +R+   +++L
Sbjct:  138 WRTYLTIEERQAVRSKIQDAYTSTCKTYEELLQAASAIEEELLHIAAPSRLDYFKSGFEFENRVKLKREQL 208          
BLAST of EWM28875.1 vs. NCBI_GenBank
Match: gi|673014996|ref|XP_008861459.1| (hypothetical protein H310_00437 [Aphanomyces invadans] >gi|574483057|gb|ETW10048.1| hypothetical protein H310_00437 [Aphanomyces invadans])

HSP 1 Score: 70.0922 bits (170), Expect = 6.329e-10
Identity = 36/87 (41.38%), Postives = 54/87 (62.07%), Query Frame = 0
Query:  144 WQTSLTEEEREVVRLKIMAAYKRQAKTYEDVLNVAAALQEEECFGRAPSRLDYIKDTVQFSHRLGEAKKKLVSGRGKGSGAEKQAEV 230
            W+  LT EER+ VR KI+ AY    KTYE++L+ A+A++EE     APSRLDY K   +F +R+   +++L   +G+    EK+  V
Sbjct:  199 WRMYLTIEERQAVRSKILDAYTSTCKTYEELLHAASAIEEELLHIAAPSRLDYFKSGFEFENRVKLKREQL---QGQLVAMEKRKHV 282          
BLAST of EWM28875.1 vs. NCBI_GenBank
Match: gi|953501598|emb|CEG37047.1| (hypothetical protein PHALS_04510 [Plasmopara halstedii])

HSP 1 Score: 68.1662 bits (165), Expect = 9.654e-10
Identity = 33/71 (46.48%), Postives = 44/71 (61.97%), Query Frame = 0
Query:  144 WQTSLTEEEREVVRLKIMAAYKRQAKTYEDVLNVAAALQEEECFGRAPSRLDYIKDTVQFSHRLGEAKKKL 214
            W+  LT EER+ VR KI  AY  +  +YED+L VA A++EE     APSRLDY K   +F +R+   K +L
Sbjct:  121 WRMYLTIEERQAVRSKIRDAYTSRCSSYEDLLQVACAIEEELLHISAPSRLDYFKSGFEFENRVKLKKDQL 191          
BLAST of EWM28875.1 vs. NCBI_GenBank
Match: gi|301106941|ref|XP_002902553.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262098427|gb|EEY56479.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 69.3218 bits (168), Expect = 1.374e-9
Identity = 34/71 (47.89%), Postives = 44/71 (61.97%), Query Frame = 0
Query:  144 WQTSLTEEEREVVRLKIMAAYKRQAKTYEDVLNVAAALQEEECFGRAPSRLDYIKDTVQFSHRLGEAKKKL 214
            W+  LT EER+ VR KI  AY  +  TYED+L VA A++EE     APSRLDY K   +F +R+   K +L
Sbjct:  255 WRMYLTIEERQAVRSKIRDAYTSRCSTYEDLLQVACAIEEELLHISAPSRLDYFKSGFEFENRVKLKKDQL 325          
BLAST of EWM28875.1 vs. NCBI_GenBank
Match: gi|698778709|ref|XP_009822398.1| (hypothetical protein H257_01076 [Aphanomyces astaci] >gi|574122059|gb|ETV87535.1| hypothetical protein H257_01076 [Aphanomyces astaci])

HSP 1 Score: 68.5514 bits (166), Expect = 1.765e-9
Identity = 37/96 (38.54%), Postives = 57/96 (59.38%), Query Frame = 0
Query:  134 ASKNTLSNKTWQTSLTEEEREVVRLKIMAAYKRQAKTYEDVLNVAAALQEEECFGRAPSRLDYIKDTVQFSHRLGEAKKKLVSGRGKGSGAEKQAE 229
            A   T+    W+  LT EER+ VR KI  AY    KTYE++L+ A+A++EE     APSRLDY K   +F +R+   +++L   +G+ +  EK+ +
Sbjct:  199 AVSTTVPAADWRMYLTIEERQAVRSKIQDAYTSTCKTYEELLHAASAIEEELLHIAAPSRLDYFKSGFEFENRVKLKREQL---QGQLAAVEKRKQ 291          
BLAST of EWM28875.1 vs. NCBI_GenBank
Match: gi|813134054|ref|XP_012198026.1| (hypothetical protein SPRG_04046 [Saprolegnia parasitica CBS 223.65] >gi|641537578|gb|KDO31431.1| hypothetical protein SPRG_04046 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 67.3958 bits (163), Expect = 2.385e-9
Identity = 36/96 (37.50%), Postives = 56/96 (58.33%), Query Frame = 0
Query:  125 ISNQLNMEDASKNTLSNKT------WQTSLTEEEREVVRLKIMAAYKRQAKTYEDVLNVAAALQEEECFGRAPSRLDYIKDTVQFSHRLGEAKKKL 214
            ++ QL+    S++ L + +      W+  LT EER+ VR KI  AY    KTYE++L  A+A++EE     APSRLDY K   +F +R+   +++L
Sbjct:  113 VNPQLSAAAPSRSQLPSSSGPPPQDWRMYLTIEERQAVRSKIQDAYTSTCKTYEELLQAASAIEEELLHIAAPSRLDYFKSGFEFENRVKLKREQL 208          
BLAST of EWM28875.1 vs. NCBI_GenBank
Match: gi|695407600|ref|XP_009524419.1| (hypothetical protein PHYSODRAFT_350785 [Phytophthora sojae] >gi|348681886|gb|EGZ21702.1| hypothetical protein PHYSODRAFT_350785 [Phytophthora sojae])

HSP 1 Score: 68.1662 bits (165), Expect = 2.632e-9
Identity = 34/71 (47.89%), Postives = 44/71 (61.97%), Query Frame = 0
Query:  144 WQTSLTEEEREVVRLKIMAAYKRQAKTYEDVLNVAAALQEEECFGRAPSRLDYIKDTVQFSHRLGEAKKKL 214
            W+  LT EER+ VR KI  AY  +  TYED+L VA A++EE     APSRLDY K   +F +R+   K +L
Sbjct:  231 WRMYLTIEERQAVRSKIRDAYTSRCTTYEDLLQVACAIEEELLHISAPSRLDYFKSGFEFENRVKLKKDQL 301          
BLAST of EWM28875.1 vs. NCBI_GenBank
Match: gi|1173950512|gb|OQR98470.1| (hypothetical protein ACHHYP_08596 [Achlya hypogyna])

HSP 1 Score: 67.0106 bits (162), Expect = 2.905e-9
Identity = 35/85 (41.18%), Postives = 53/85 (62.35%), Query Frame = 0
Query:  144 WQTSLTEEEREVVRLKIMAAYKRQAKTYEDVLNVAAALQEEECFGRAPSRLDYIKDTVQFSHRLGEAKKKLVSGRGKGSGAEKQA 228
            W+  LT EER+ VR KI  AY    KTYE++L  A+A++EE     APSRLDY K   +F +R+   +++L   +G+ +  EK++
Sbjct:  133 WRMYLTIEERQAVRSKIQDAYTSTCKTYEELLQAASAIEEELLHIAAPSRLDYFKSGFEFENRVKLKREQL---QGQLAALEKKS 214          
The following BLAST results are available for this feature:
BLAST of EWM28875.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111307|gb|EWM28875.1|0.000e+0100.00hypothetical protein Naga_100095g8 [Nannochloropsi... [more]
gi|675192493|ref|XP_008905131.1|3.185e-1047.89hypothetical protein PPTG_11742 [Phytophthora para... [more]
gi|669166328|ref|XP_008618726.1|5.392e-1046.48hypothetical protein SDRG_14380 [Saprolegnia dicli... [more]
gi|673014996|ref|XP_008861459.1|6.329e-1041.38hypothetical protein H310_00437 [Aphanomyces invad... [more]
gi|953501598|emb|CEG37047.1|9.654e-1046.48hypothetical protein PHALS_04510 [Plasmopara halst... [more]
gi|301106941|ref|XP_002902553.1|1.374e-947.89conserved hypothetical protein [Phytophthora infes... [more]
gi|698778709|ref|XP_009822398.1|1.765e-938.54hypothetical protein H257_01076 [Aphanomyces astac... [more]
gi|813134054|ref|XP_012198026.1|2.385e-937.50hypothetical protein SPRG_04046 [Saprolegnia paras... [more]
gi|695407600|ref|XP_009524419.1|2.632e-947.89hypothetical protein PHYSODRAFT_350785 [Phytophtho... [more]
gi|1173950512|gb|OQR98470.1|2.905e-941.18hypothetical protein ACHHYP_08596 [Achlya hypogyna... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1800rna1800Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications