EWM28875.1, cds1796 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM28875.1 vs. NCBI_GenBank
Match: gi|585111307|gb|EWM28875.1| (hypothetical protein Naga_100095g8 [Nannochloropsis gaditana]) HSP 1 Score: 668.692 bits (1724), Expect = 0.000e+0 Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 0
Query: 1 MRPAFHSHRADLFETAPGDRGELLVLCAACVGTSGVCQRLFTSSAHFPPYPSPQVHSHRRRTFAAAFIMASVISSPKKEASVMSEPSTFPDGPGRASPGLALPRLRMSVSDTPGILCRPLLLPSISNQLNMEDASKNTLSNKTWQTSLTEEEREVVRLKIMAAYKRQAKTYEDVLNVAAALQEEECFGRAPSRLDYIKDTVQFSHRLGEAKKKLVSGRGKGSGAEKQAEVKEKEPTHSDTGGTRKRGRSEAVEINTVSDKQIKEGHGAGEGENSKKKRGEKGQTRGREQDPCTRLEGGSNTSAKFTMNAAGCRGKISEQPKGKE 324
MRPAFHSHRADLFETAPGDRGELLVLCAACVGTSGVCQRLFTSSAHFPPYPSPQVHSHRRRTFAAAFIMASVISSPKKEASVMSEPSTFPDGPGRASPGLALPRLRMSVSDTPGILCRPLLLPSISNQLNMEDASKNTLSNKTWQTSLTEEEREVVRLKIMAAYKRQAKTYEDVLNVAAALQEEECFGRAPSRLDYIKDTVQFSHRLGEAKKKLVSGRGKGSGAEKQAEVKEKEPTHSDTGGTRKRGRSEAVEINTVSDKQIKEGHGAGEGENSKKKRGEKGQTRGREQDPCTRLEGGSNTSAKFTMNAAGCRGKISEQPKGKE
Sbjct: 1 MRPAFHSHRADLFETAPGDRGELLVLCAACVGTSGVCQRLFTSSAHFPPYPSPQVHSHRRRTFAAAFIMASVISSPKKEASVMSEPSTFPDGPGRASPGLALPRLRMSVSDTPGILCRPLLLPSISNQLNMEDASKNTLSNKTWQTSLTEEEREVVRLKIMAAYKRQAKTYEDVLNVAAALQEEECFGRAPSRLDYIKDTVQFSHRLGEAKKKLVSGRGKGSGAEKQAEVKEKEPTHSDTGGTRKRGRSEAVEINTVSDKQIKEGHGAGEGENSKKKRGEKGQTRGREQDPCTRLEGGSNTSAKFTMNAAGCRGKISEQPKGKE 324
BLAST of EWM28875.1 vs. NCBI_GenBank
Match: gi|675192493|ref|XP_008905131.1| (hypothetical protein PPTG_11742 [Phytophthora parasitica INRA-310] >gi|566024539|gb|ETI47450.1| hypothetical protein F443_08367 [Phytophthora parasitica P1569] >gi|567961835|gb|ETK87372.1| hypothetical protein L915_08199 [Phytophthora parasitica] >gi|567990561|gb|ETL40789.1| hypothetical protein L916_08123 [Phytophthora parasitica] >gi|568019781|gb|ETL93922.1| hypothetical protein L917_08021 [Phytophthora parasitica] >gi|568050231|gb|ETM47186.1| hypothetical protein L914_08085 [Phytophthora parasitica] >gi|568094522|gb|ETN09298.1| hypothetical protein PPTG_11742 [Phytophthora parasitica INRA-310] >gi|570328200|gb|ETO76148.1| hypothetical protein F444_08426 [Phytophthora parasitica P1976] >gi|570951975|gb|ETP17232.1| hypothetical protein F441_08352 [Phytophthora parasitica CJ01A1] >gi|570986170|gb|ETP45272.1| hypothetical protein F442_08309 [Phytophthora parasitica P10297] >gi|970635419|gb|KUF80311.1| hypothetical protein AM587_10016929 [Phytophthora nicotianae]) HSP 1 Score: 69.707 bits (169), Expect = 3.185e-10 Identity = 34/71 (47.89%), Postives = 44/71 (61.97%), Query Frame = 0
Query: 144 WQTSLTEEEREVVRLKIMAAYKRQAKTYEDVLNVAAALQEEECFGRAPSRLDYIKDTVQFSHRLGEAKKKL 214
W+ LT EER+ VR KI AY + TYED+L VA A++EE APSRLDY K +F +R+ K +L
Sbjct: 129 WRMYLTIEERQAVRSKIRDAYTSRCSTYEDLLQVACAIEEELLHISAPSRLDYFKSGFEFENRVKLKKDQL 199
BLAST of EWM28875.1 vs. NCBI_GenBank
Match: gi|669166328|ref|XP_008618726.1| (hypothetical protein SDRG_14380 [Saprolegnia diclina VS20] >gi|530729554|gb|EQC27796.1| hypothetical protein SDRG_14380 [Saprolegnia diclina VS20]) HSP 1 Score: 69.3218 bits (168), Expect = 5.392e-10 Identity = 33/71 (46.48%), Postives = 46/71 (64.79%), Query Frame = 0
Query: 144 WQTSLTEEEREVVRLKIMAAYKRQAKTYEDVLNVAAALQEEECFGRAPSRLDYIKDTVQFSHRLGEAKKKL 214
W+T LT EER+ VR KI AY KTYE++L A+A++EE APSRLDY K +F +R+ +++L
Sbjct: 138 WRTYLTIEERQAVRSKIQDAYTSTCKTYEELLQAASAIEEELLHIAAPSRLDYFKSGFEFENRVKLKREQL 208
BLAST of EWM28875.1 vs. NCBI_GenBank
Match: gi|673014996|ref|XP_008861459.1| (hypothetical protein H310_00437 [Aphanomyces invadans] >gi|574483057|gb|ETW10048.1| hypothetical protein H310_00437 [Aphanomyces invadans]) HSP 1 Score: 70.0922 bits (170), Expect = 6.329e-10 Identity = 36/87 (41.38%), Postives = 54/87 (62.07%), Query Frame = 0
Query: 144 WQTSLTEEEREVVRLKIMAAYKRQAKTYEDVLNVAAALQEEECFGRAPSRLDYIKDTVQFSHRLGEAKKKLVSGRGKGSGAEKQAEV 230
W+ LT EER+ VR KI+ AY KTYE++L+ A+A++EE APSRLDY K +F +R+ +++L +G+ EK+ V
Sbjct: 199 WRMYLTIEERQAVRSKILDAYTSTCKTYEELLHAASAIEEELLHIAAPSRLDYFKSGFEFENRVKLKREQL---QGQLVAMEKRKHV 282
BLAST of EWM28875.1 vs. NCBI_GenBank
Match: gi|953501598|emb|CEG37047.1| (hypothetical protein PHALS_04510 [Plasmopara halstedii]) HSP 1 Score: 68.1662 bits (165), Expect = 9.654e-10 Identity = 33/71 (46.48%), Postives = 44/71 (61.97%), Query Frame = 0
Query: 144 WQTSLTEEEREVVRLKIMAAYKRQAKTYEDVLNVAAALQEEECFGRAPSRLDYIKDTVQFSHRLGEAKKKL 214
W+ LT EER+ VR KI AY + +YED+L VA A++EE APSRLDY K +F +R+ K +L
Sbjct: 121 WRMYLTIEERQAVRSKIRDAYTSRCSSYEDLLQVACAIEEELLHISAPSRLDYFKSGFEFENRVKLKKDQL 191
BLAST of EWM28875.1 vs. NCBI_GenBank
Match: gi|301106941|ref|XP_002902553.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262098427|gb|EEY56479.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 69.3218 bits (168), Expect = 1.374e-9 Identity = 34/71 (47.89%), Postives = 44/71 (61.97%), Query Frame = 0
Query: 144 WQTSLTEEEREVVRLKIMAAYKRQAKTYEDVLNVAAALQEEECFGRAPSRLDYIKDTVQFSHRLGEAKKKL 214
W+ LT EER+ VR KI AY + TYED+L VA A++EE APSRLDY K +F +R+ K +L
Sbjct: 255 WRMYLTIEERQAVRSKIRDAYTSRCSTYEDLLQVACAIEEELLHISAPSRLDYFKSGFEFENRVKLKKDQL 325
BLAST of EWM28875.1 vs. NCBI_GenBank
Match: gi|698778709|ref|XP_009822398.1| (hypothetical protein H257_01076 [Aphanomyces astaci] >gi|574122059|gb|ETV87535.1| hypothetical protein H257_01076 [Aphanomyces astaci]) HSP 1 Score: 68.5514 bits (166), Expect = 1.765e-9 Identity = 37/96 (38.54%), Postives = 57/96 (59.38%), Query Frame = 0
Query: 134 ASKNTLSNKTWQTSLTEEEREVVRLKIMAAYKRQAKTYEDVLNVAAALQEEECFGRAPSRLDYIKDTVQFSHRLGEAKKKLVSGRGKGSGAEKQAE 229
A T+ W+ LT EER+ VR KI AY KTYE++L+ A+A++EE APSRLDY K +F +R+ +++L +G+ + EK+ +
Sbjct: 199 AVSTTVPAADWRMYLTIEERQAVRSKIQDAYTSTCKTYEELLHAASAIEEELLHIAAPSRLDYFKSGFEFENRVKLKREQL---QGQLAAVEKRKQ 291
BLAST of EWM28875.1 vs. NCBI_GenBank
Match: gi|813134054|ref|XP_012198026.1| (hypothetical protein SPRG_04046 [Saprolegnia parasitica CBS 223.65] >gi|641537578|gb|KDO31431.1| hypothetical protein SPRG_04046 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 67.3958 bits (163), Expect = 2.385e-9 Identity = 36/96 (37.50%), Postives = 56/96 (58.33%), Query Frame = 0
Query: 125 ISNQLNMEDASKNTLSNKT------WQTSLTEEEREVVRLKIMAAYKRQAKTYEDVLNVAAALQEEECFGRAPSRLDYIKDTVQFSHRLGEAKKKL 214
++ QL+ S++ L + + W+ LT EER+ VR KI AY KTYE++L A+A++EE APSRLDY K +F +R+ +++L
Sbjct: 113 VNPQLSAAAPSRSQLPSSSGPPPQDWRMYLTIEERQAVRSKIQDAYTSTCKTYEELLQAASAIEEELLHIAAPSRLDYFKSGFEFENRVKLKREQL 208
BLAST of EWM28875.1 vs. NCBI_GenBank
Match: gi|695407600|ref|XP_009524419.1| (hypothetical protein PHYSODRAFT_350785 [Phytophthora sojae] >gi|348681886|gb|EGZ21702.1| hypothetical protein PHYSODRAFT_350785 [Phytophthora sojae]) HSP 1 Score: 68.1662 bits (165), Expect = 2.632e-9 Identity = 34/71 (47.89%), Postives = 44/71 (61.97%), Query Frame = 0
Query: 144 WQTSLTEEEREVVRLKIMAAYKRQAKTYEDVLNVAAALQEEECFGRAPSRLDYIKDTVQFSHRLGEAKKKL 214
W+ LT EER+ VR KI AY + TYED+L VA A++EE APSRLDY K +F +R+ K +L
Sbjct: 231 WRMYLTIEERQAVRSKIRDAYTSRCTTYEDLLQVACAIEEELLHISAPSRLDYFKSGFEFENRVKLKKDQL 301
BLAST of EWM28875.1 vs. NCBI_GenBank
Match: gi|1173950512|gb|OQR98470.1| (hypothetical protein ACHHYP_08596 [Achlya hypogyna]) HSP 1 Score: 67.0106 bits (162), Expect = 2.905e-9 Identity = 35/85 (41.18%), Postives = 53/85 (62.35%), Query Frame = 0
Query: 144 WQTSLTEEEREVVRLKIMAAYKRQAKTYEDVLNVAAALQEEECFGRAPSRLDYIKDTVQFSHRLGEAKKKLVSGRGKGSGAEKQA 228
W+ LT EER+ VR KI AY KTYE++L A+A++EE APSRLDY K +F +R+ +++L +G+ + EK++
Sbjct: 133 WRMYLTIEERQAVRSKIQDAYTSTCKTYEELLQAASAIEEELLHIAAPSRLDYFKSGFEFENRVKLKREQL---QGQLAALEKKS 214 The following BLAST results are available for this feature:
BLAST of EWM28875.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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