EWM28879.1, cds1793 (CDS) Nannochloropsis gaditana

Overview
NameEWM28879.1
Unique Namecds1793
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:169729..171648 +

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Properties
Property NameValue
Protein idEWM28879.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100095g4.10171.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:169729..171648 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
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BLAST of EWM28879.1 vs. NCBI_GenBank
Match: gi|585111311|gb|EWM28879.1| (hypothetical protein Naga_100095g4 [Nannochloropsis gaditana])

HSP 1 Score: 1261.9 bits (3264), Expect = 0.000e+0
Identity = 639/639 (100.00%), Postives = 639/639 (100.00%), Query Frame = 0 
Query:    1 MTRHIRGTPLNVRPGILRIALVVTAVFLVLPTLCVPLLRELKGMDGFPSTLRVALVLGGAAAWAIASFTSATVWLTLSLAVTLASGLSYMSILGLVQPTLIMPATAPLFVAGLMSVPVLASFDVILLLGVMGGLGSQGVHRVQDGAHIETFVLGTLAVLCLLASPGVIGHTASRVLSPLHTNIFTLPIPVLAAVYPFLQPSLPNFFIGGLTLTLCLAMCLSDAPAATVAARDNARGSHWLLAALLTTLCLLISLTPDDSHALAALNAYTLIMTGTGVAVASTSFLASTARVWGPVRSGEFQMVTLDFVALAAYFALPLLYVLYLGLQQLLHAPLSLPFAIPPGRLPDLAWLPKWLQPLGLSHPLGPATLLTWMVVSTQDAFEESSILWAHWLVETYTLGRLDTRLVALLVSLQDLLRHAPSAAGASEDEVPPGTMATSNAGAKQIEDTRPQGLEALLARTEMPRLNIFVTPGLAAAYPTLCTSLVRHGHYLGVETAAGPFASPWTVMDTVSRGVRAVKQALVAGGTRGDLAGYMGSDGHRNPWALWRAKSLQLRFIAPVHRVVLGDNAGLRLCELLNPWCQGGLVKVEVGAQGSSGYVHLAATLLDLKERAEEGGYVISALSEVCPVVKPMVLPAEQGR 639
            MTRHIRGTPLNVRPGILRIALVVTAVFLVLPTLCVPLLRELKGMDGFPSTLRVALVLGGAAAWAIASFTSATVWLTLSLAVTLASGLSYMSILGLVQPTLIMPATAPLFVAGLMSVPVLASFDVILLLGVMGGLGSQGVHRVQDGAHIETFVLGTLAVLCLLASPGVIGHTASRVLSPLHTNIFTLPIPVLAAVYPFLQPSLPNFFIGGLTLTLCLAMCLSDAPAATVAARDNARGSHWLLAALLTTLCLLISLTPDDSHALAALNAYTLIMTGTGVAVASTSFLASTARVWGPVRSGEFQMVTLDFVALAAYFALPLLYVLYLGLQQLLHAPLSLPFAIPPGRLPDLAWLPKWLQPLGLSHPLGPATLLTWMVVSTQDAFEESSILWAHWLVETYTLGRLDTRLVALLVSLQDLLRHAPSAAGASEDEVPPGTMATSNAGAKQIEDTRPQGLEALLARTEMPRLNIFVTPGLAAAYPTLCTSLVRHGHYLGVETAAGPFASPWTVMDTVSRGVRAVKQALVAGGTRGDLAGYMGSDGHRNPWALWRAKSLQLRFIAPVHRVVLGDNAGLRLCELLNPWCQGGLVKVEVGAQGSSGYVHLAATLLDLKERAEEGGYVISALSEVCPVVKPMVLPAEQGR
Sbjct:    1 MTRHIRGTPLNVRPGILRIALVVTAVFLVLPTLCVPLLRELKGMDGFPSTLRVALVLGGAAAWAIASFTSATVWLTLSLAVTLASGLSYMSILGLVQPTLIMPATAPLFVAGLMSVPVLASFDVILLLGVMGGLGSQGVHRVQDGAHIETFVLGTLAVLCLLASPGVIGHTASRVLSPLHTNIFTLPIPVLAAVYPFLQPSLPNFFIGGLTLTLCLAMCLSDAPAATVAARDNARGSHWLLAALLTTLCLLISLTPDDSHALAALNAYTLIMTGTGVAVASTSFLASTARVWGPVRSGEFQMVTLDFVALAAYFALPLLYVLYLGLQQLLHAPLSLPFAIPPGRLPDLAWLPKWLQPLGLSHPLGPATLLTWMVVSTQDAFEESSILWAHWLVETYTLGRLDTRLVALLVSLQDLLRHAPSAAGASEDEVPPGTMATSNAGAKQIEDTRPQGLEALLARTEMPRLNIFVTPGLAAAYPTLCTSLVRHGHYLGVETAAGPFASPWTVMDTVSRGVRAVKQALVAGGTRGDLAGYMGSDGHRNPWALWRAKSLQLRFIAPVHRVVLGDNAGLRLCELLNPWCQGGLVKVEVGAQGSSGYVHLAATLLDLKERAEEGGYVISALSEVCPVVKPMVLPAEQGR 639
The following BLAST results are available for this feature:
BLAST of EWM28879.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585111311|gb|EWM28879.1|0.000e+0100.00hypothetical protein Naga_100095g4 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1797rna1797Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications