EWM28878.1, cds1790 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28878.1 vs. NCBI_GenBank
Match: gi|585111310|gb|EWM28878.1| (hypothetical protein Naga_100095g1 [Nannochloropsis gaditana]) HSP 1 Score: 481.1 bits (1237), Expect = 9.895e-172 Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0
Query: 1 MDLEDYLFRYDRGVFWLAQTSAASIPVFPFLQGWYFARGSRSLLSRVCWRWLFSSSFLFSLLHAATPDLLASRLLLVAPCLPVNQAPALLAFLHATLPLPPPAPLYLLPQRGSSVRQPFASHGHIHTLFLSVHVYARLGKGEAQGHTQRVEAWVGKKGGRTGLCTMNYWDKSVFWSGYPLYDWREYVYLRHKYGAEGVFPSLEEKVCWEEEKAKSGKGWIERYWEGRRRKFLGILV 236
MDLEDYLFRYDRGVFWLAQTSAASIPVFPFLQGWYFARGSRSLLSRVCWRWLFSSSFLFSLLHAATPDLLASRLLLVAPCLPVNQAPALLAFLHATLPLPPPAPLYLLPQRGSSVRQPFASHGHIHTLFLSVHVYARLGKGEAQGHTQRVEAWVGKKGGRTGLCTMNYWDKSVFWSGYPLYDWREYVYLRHKYGAEGVFPSLEEKVCWEEEKAKSGKGWIERYWEGRRRKFLGILV
Sbjct: 1 MDLEDYLFRYDRGVFWLAQTSAASIPVFPFLQGWYFARGSRSLLSRVCWRWLFSSSFLFSLLHAATPDLLASRLLLVAPCLPVNQAPALLAFLHATLPLPPPAPLYLLPQRGSSVRQPFASHGHIHTLFLSVHVYARLGKGEAQGHTQRVEAWVGKKGGRTGLCTMNYWDKSVFWSGYPLYDWREYVYLRHKYGAEGVFPSLEEKVCWEEEKAKSGKGWIERYWEGRRRKFLGILV 236
BLAST of EWM28878.1 vs. NCBI_GenBank
Match: gi|551648584|ref|XP_005827074.1| (hypothetical protein GUITHDRAFT_164774 [Guillardia theta CCMP2712] >gi|428171175|gb|EKX40094.1| hypothetical protein GUITHDRAFT_164774 [Guillardia theta CCMP2712]) HSP 1 Score: 122.479 bits (306), Expect = 2.301e-28 Identity = 74/211 (35.07%), Postives = 115/211 (54.50%), Query Frame = 0
Query: 4 EDYLFRYDRGVFWLAQ--TSAASIPVFPFLQGWYFARGSRSLLSRVCWRWLFSSSFLFSLLHAATPDLLASRLLLVAPCLPVNQAPALLAFLHATLPLPPPAPLYLLPQRGSSVRQPFASHGHIHTLFLSVHVYARLGKGEAQGHTQRVEAWVGKKGGRTGLCTMNYWDKSVFWS-----GYPLYDWREYVYLRHKYGAEGVFPSLEEKVC 207
EDYLFRYD G FW+A+ T A + F S L R+ W+FS+ LFSLL A+ +AS+++++ +P+ A L+ + + +P+ P++L P + SS Q + HGH+ +L ++V +Y R+ G +T+ +EA + K GGR L + N++ ++ FW + EY LR KY AEGVFP+L KVC
Sbjct: 387 EDYLFRYDYGAFWMARPMTWGAKSTRLNLVTSTLFLMTSPWL--RMFTGWMFSTRILFSLLRLASRSAIASKMIILDAYMPIRSAATLVQEVRSKVPIS--TPIWLCPVKPSSAAQLLSPHGHVKSLVVNVGIYGRVCDGRGSFYTKFLEAQIAKLGGRKMLYSQNFYSENEFWGREAPWKKTMPSESEYNQLRKKYAAEGVFPNLFVKVC 593
BLAST of EWM28878.1 vs. NCBI_GenBank
Match: gi|1084436859|gb|OGN04071.1| (hypothetical protein A2659_02385 [Candidatus Yanofskybacteria bacterium RIFCSPHIGHO2_01_FULL_44_24] >gi|1084449928|gb|OGN16544.1| hypothetical protein A3B99_05015 [Candidatus Yanofskybacteria bacterium RIFCSPHIGHO2_02_FULL_44_12b] >gi|1084459851|gb|OGN26084.1| hypothetical protein A2925_00470 [Candidatus Yanofskybacteria bacterium RIFCSPLOWO2_01_FULL_44_22]) HSP 1 Score: 70.8626 bits (172), Expect = 1.310e-10 Identity = 63/211 (29.86%), Postives = 96/211 (45.50%), Query Frame = 0
Query: 3 LEDYLFRYDRGVFWLAQTSAA--SIPVFPFLQGWYFARGSRSLLSRVCWRWLFSSSFLFSLLHAATPDLLASRLLLVAPCLPVNQAPALLAFLHATLPLPPPAPLYLLPQRGSSVRQPFASHGHIHTLFLSVHVYARLGKGEAQGHTQRVEAWVGKKGGRTGLCTMNYWDKSVFWSGYPLYDWREYVYLRHKYGAEGVFPSLEEKVCWEEE 211
++DYLFRYDRGVFWL + + + IP F R +R LL R S SL+ AT + + + CLP L F+ L + PL+L+P R + + + + L ++ V+ ++ KG+ ++VE + + GR L Y+ + FW +YD Y LR KY A VFP L +K E+
Sbjct: 259 IKDYLFRYDRGVFWLGRQALSFFKIP---------FTRLTRFLLDRAL------KSRTLSLVGQATS--TSQKYFVQDLCLPKENFLNFLQFVDEELHI---YPLWLVPLRPAGSLDKLSPNYILTDLVINAGVWGKI-KGDYFNVNRKVEGKLRELKGRKVLYAHAYYPRDEFWK---IYDHSWYSQLREKYFASSVFPDLYDKTHVSEK 445
BLAST of EWM28878.1 vs. NCBI_GenBank
Match: gi|517778238|ref|WP_018948446.1| (FAD binding domain-containing protein [Thioalkalivibrio sp. ALMg11]) HSP 1 Score: 67.3958 bits (163), Expect = 1.998e-9 Identity = 62/210 (29.52%), Postives = 98/210 (46.67%), Query Frame = 0
Query: 1 MDLEDYLFRYDRGVFWLAQTSAASIPVFPFLQGWYFARGSRSLLSRVCWRWLFSSS--FLFSLLHAATPDLLASRLLLVAPCLPVNQAPALLAFLHATLPLPPP--APLYLLPQRGSSVRQPFASHGHIHTLFLSVHVYARLGKGEAQGH-TQRVEAWVGKKGGRTGLCTMNYWDKSVFWSGYPLYDWREYVYLRHKYGAEGVFPSLEEK 205
+ + DYL+R+D FW ++ A + L G R LS V ++ + +S + SLLHA P S ++ +P+ A A LA A L + P P +++P+ G S+ + +I+ F + + E G+ RVEA V K GG+ L + + +D++ FW YD Y L+H+ EG FP L EK
Sbjct: 250 LSIHDYLWRWDTDWFWCSRNVGAHLKPVRLLLG-------RKRLSSVTYQKIMRASRRWPLSLLHAVRP---RSEAVIQDVDIPIVNAAAFLADFEAELGIRPVWICP-FVVPEAGFSLFELRPDTAYINFGFWDI-----VRSSEPDGYYNARVEALVAKHGGKKSLYSRSTYDEATFWQN---YDRPAYEALKHECDPEGRFPGLYEK 440
BLAST of EWM28878.1 vs. NCBI_GenBank
Match: gi|1041760734|gb|OBW65689.1| (hypothetical protein AUREO_042490 [Aureobasidium pullulans]) HSP 1 Score: 66.2402 bits (160), Expect = 4.571e-9 Identity = 63/224 (28.12%), Postives = 104/224 (46.43%), Query Frame = 0
Query: 3 LEDYLFRYDRGVFWLAQTSAASIPVFPFLQGWYFARGSRSLLSRVCWRWLFSSSFLFSLLHAATPDLLASRLLLVAPCLPVNQAPALLAFLHATLPLPPPAPLYLLPQRGSSVRQPFASHGHIHTLFLSVHVYARLGKGEAQGHTQR---VEAWVGKKGGRTGLCTMNYWDKSVFWSGYPLYDWREYVYLRHKYGAEGVFPSLEEKVC-WEEEKAKSGK-GWIE 221
L DYLFRYDRG FW+ + A + + PF + ++R +S ++ LHA+ + ++ +P A + F++A PL+L P + + + F HG L ++V V+ G A+ +R +E+ V + GGR L ++ +S FW +YD + Y+ LR KY AE PS +K C +++G+ GW E
Sbjct: 188 LADYLFRYDRGAFWMGK-YAFNYFMVPF-----------NRITRWALDDFMQTSTMYHALHASGH---MQQYIIQDLAIP---AANVKDFINAVDQNFDFYPLWLCPMKPWTQQSSFHPHGIDTNLLINVGVWGPNGASTAEEGIERNRKLESLVKQHGGRKWLYAQAFYTESEFWD---IYDEKSYLDLRKKYRAE-YLPSAFDKACAIGNGTSQTGQPGWTE 389
BLAST of EWM28878.1 vs. NCBI_GenBank
Match: gi|662525626|gb|KEQ83009.1| (FAD-binding domain-containing protein [Aureobasidium pullulans EXF-150]) HSP 1 Score: 64.6994 bits (156), Expect = 1.985e-8 Identity = 60/224 (26.79%), Postives = 99/224 (44.20%), Query Frame = 0
Query: 3 LEDYLFRYDRGVFWLAQTSAASIPVFPFLQGWYFARGSRSLLSRVCWRWLFSSSFLFSLLHAATPDLLASRLLLVAPCLPVNQAPALLAFLHATLPLPPPAPLYLLPQRGSSVRQPFASHGHIHTLFLSVHVYARLGKG---EAQGHTQRVEAWVGKKGGRTGLCTMNYWDKSVFWSGYPLYDWREYVYLRHKYGAEGVFPSLEEKVC-WEEEKAKSGK-GWIE 221
L DYLFRYDRG FW+ + A + + PF + ++R +S ++ LHA+ + ++ +P + + T PL+L P + + + F HG L ++V V+ G E +++E+ V + GGR L ++ +S FW +YD + Y+ LR KY AE PS K C +++G+ GW E
Sbjct: 259 LADYLFRYDRGAFWMGK-YAFNYFMVPF-----------NRITRWALDDFMQTSTMYHALHASGH---MQQYIIQDLAIPAANVKDFINAVDQTFDF---YPLWLCPMKPWTQQSSFHPHGIDTNLLINVGVWGPNGASTPEEGIERNRKLESLVKQHGGRKWLYAQAFYTESEFWD---IYDEKSYLDLRKKYRAE-YLPSAFNKACAIGNGTSQTGQPGWTE 460
BLAST of EWM28878.1 vs. NCBI_GenBank
Match: gi|1028903474|gb|OAL05723.1| (FAD-binding domain-containing protein [Stagonospora sp. SRC1lsM3a]) HSP 1 Score: 64.3142 bits (155), Expect = 2.276e-8 Identity = 68/222 (30.63%), Postives = 102/222 (45.95%), Query Frame = 0
Query: 3 LEDYLFRYDRGVFWLAQTSAASIPVFPFLQGW---YFARGSRSLLSRVCWRWLFSSSFLFSLLH--AATPDLLASRLLLVAPCLPVNQAPALLAFLHATLPLPPPAPLYLLPQRGS---SVRQPFASHGHIHTLFLSVHV---------YARLGKGEAQGHTQR-VEAWVGKKGGRTGLCTMNYWDKSVFWSGYPLYDWREYVYLRHKYGAEGVFPSLEEKV 206
+ D+LFRYDRGVFW+A GW + R +R L R+ WR + F + ++H TP ++ +P + A +L++LH + PL+L P + S+ S + +++ V + R G EA T R +EA V GG L +NY+++ FW +YD R Y LR K+ AEG+ PSL EKV
Sbjct: 265 IADFLFRYDRGVFWMAA------------HGWAPLLWNRLTRFFLDRM-WR----TRFQYRVVHLIGGTPHIIQDL------AIPQSNAEDVLSYLHEEYKI---YPLWLCPIKYDPLVSMHTALTSPDPPPEMLVNIGVWGSPNYGADFLRPGTYEAFVRTNRAIEAKVTDAGGLKWLYAVNYYEEDEFWK---VYDKRRYEELRRKWSAEGL-PSLWEKV 456
BLAST of EWM28878.1 vs. NCBI_GenBank
Match: gi|389638644|ref|XP_003716955.1| (FAD binding domain-containing protein [Magnaporthe oryzae 70-15] >gi|351642774|gb|EHA50636.1| FAD binding domain-containing protein [Magnaporthe oryzae 70-15]) HSP 1 Score: 64.3142 bits (155), Expect = 2.646e-8 Identity = 69/236 (29.24%), Postives = 103/236 (43.64%), Query Frame = 0
Query: 3 LEDYLFRYDRGVFWLAQTSAASIPVFPF--LQGWYFARGSRSLLSRVCWRWLFSSSFLFSLLHAATPDLLASRLLLVAPCLPVNQAPALLAFLHATLPLPPPAPLYLLPQRG-------SSVRQPFASHGHIHTLFLSVHVYARLGKGEAQGHTQRVEAWVGKKGGRTGLCTMNYWDKSVFWSGYPLYDWREYVYLRHKYGAEGVFPSLEEKVCWEEEKAKSG-----KGWIERYW 224
L +YLFRYDRG FW+ + P PF L W+ + +R+ +R L S++ F L DLL LP + A A + + L + PL+L P R S QP S L + + E +R+E +G+ GGR L + Y+ + FWS LYD + Y LR +YGA + PS+ +K+ + + + G GW R+W
Sbjct: 268 LPEYLFRYDRGGFWVGLEAFRYFPFVPFNRLTRWFL---DDFMHTRMLYRALQSTNRSFGFL---VQDLL----------LPYSTAEAFIDYSVEELDV---WPLWLCPLRAMRGPSFHPSTTQPGPSADPKPMLNIGLWGRGAQDLDEFVAQNRRLEERLGELGGRKVLYSHAYYTEGEFWS---LYDRKWYEELRERYGAMDL-PSVYDKIRIDAKTSSGGHRPGESGWWARFW 480
BLAST of EWM28878.1 vs. NCBI_GenBank
Match: gi|440474188|gb|ELQ42945.1| (FAD binding domain-containing protein [Magnaporthe oryzae Y34] >gi|440484977|gb|ELQ64977.1| FAD binding domain-containing protein [Magnaporthe oryzae P131]) HSP 1 Score: 64.3142 bits (155), Expect = 2.744e-8 Identity = 69/236 (29.24%), Postives = 103/236 (43.64%), Query Frame = 0
Query: 3 LEDYLFRYDRGVFWLAQTSAASIPVFPF--LQGWYFARGSRSLLSRVCWRWLFSSSFLFSLLHAATPDLLASRLLLVAPCLPVNQAPALLAFLHATLPLPPPAPLYLLPQRG-------SSVRQPFASHGHIHTLFLSVHVYARLGKGEAQGHTQRVEAWVGKKGGRTGLCTMNYWDKSVFWSGYPLYDWREYVYLRHKYGAEGVFPSLEEKVCWEEEKAKSG-----KGWIERYW 224
L +YLFRYDRG FW+ + P PF L W+ + +R+ +R L S++ F L DLL LP + A A + + L + PL+L P R S QP S L + + E +R+E +G+ GGR L + Y+ + FWS LYD + Y LR +YGA + PS+ +K+ + + + G GW R+W
Sbjct: 267 LPEYLFRYDRGGFWVGLEAFRYFPFVPFNRLTRWFL---DDFMHTRMLYRALQSTNRSFGFL---VQDLL----------LPYSTAEAFIDYSVEELDV---WPLWLCPLRAMRGPSFHPSTTQPGPSADPKPMLNIGLWGRGAQDLDEFVAQNRRLEERLGELGGRKVLYSHAYYTEGEFWS---LYDRKWYEELRERYGAMDL-PSVYDKIRIDAKTSSGGHRPGESGWWARFW 479
BLAST of EWM28878.1 vs. NCBI_GenBank
Match: gi|516567487|ref|WP_017942553.1| (MULTISPECIES: FAD binding domain-containing protein [Thioalkalivibrio]) HSP 1 Score: 63.5438 bits (153), Expect = 4.560e-8 Identity = 58/210 (27.62%), Postives = 96/210 (45.71%), Query Frame = 0
Query: 1 MDLEDYLFRYDRGVFWLAQTSAASIPVFPFLQGWYFARGSRSLLSRVCWRWLFSSS--FLFSLLHAATPDLLASRLLLVAPCLPVNQAPALLAFLHATLPLPPP--APLYLLPQRGSSVRQPFASHGHIHTLFLSVHVYARLGKGEAQGH-TQRVEAWVGKKGGRTGLCTMNYWDKSVFWSGYPLYDWREYVYLRHKYGAEGVFPSLEEK 205
+ + DYL+R+D FW ++ A + L G R LS V ++ + +S + SLLHA P S ++ +P+ A A LA A + + P P +++P+ G S+ Q T +++ + + E G+ RVE V K GG+ L + + +D++ FW YD Y L+ + +G FP L EK
Sbjct: 250 LSIHDYLWRWDTDWFWCSRNVGAHLKPVRLLLG-------RKRLSSVTYQKIMRASRRWPLSLLHAVRP---RSEAVIQDVDIPIGNAAAFLADFEAEIGIRPVWICP-FVVPEAGFSLFQL-----RTDTPYINFGFWDMVRSSEPDGYYNARVEELVAKHGGKKSLYSRSTYDEATFWQN---YDREAYKALKRECDPDGRFPGLYEK 440 The following BLAST results are available for this feature:
BLAST of EWM28878.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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