EWM28893.1, cds1780 (CDS) Nannochloropsis gaditana

Overview
NameEWM28893.1
Unique Namecds1780
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:118136..118573 -

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Properties
Property NameValue
Protein idEWM28893.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_102619g1.4564.mrna
GbkeyCDS
End range.
End range118573
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:118136..118573 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM28893.1 vs. NCBI_GenBank
Match: gi|585111330|gb|EWM28893.1| (hypothetical protein Naga_102619g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 268.47 bits (685), Expect = 1.342e-90
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0 
Query:    1 FLPPLLPSLPSFPSSFDGPVRSFRLRTLFASLPPPFPLPPSPLQLYNDFFGPPMRVIEEEGEAISLQGLPPSSSFPPAHRPYRASSQEYYESGALPQLLRGLCIYLHETLRPLVIQEVSCPRFPPPLLPALLPALPFLLSPLTYP 145
            FLPPLLPSLPSFPSSFDGPVRSFRLRTLFASLPPPFPLPPSPLQLYNDFFGPPMRVIEEEGEAISLQGLPPSSSFPPAHRPYRASSQEYYESGALPQLLRGLCIYLHETLRPLVIQEVSCPRFPPPLLPALLPALPFLLSPLTYP
Sbjct:    1 FLPPLLPSLPSFPSSFDGPVRSFRLRTLFASLPPPFPLPPSPLQLYNDFFGPPMRVIEEEGEAISLQGLPPSSSFPPAHRPYRASSQEYYESGALPQLLRGLCIYLHETLRPLVIQEVSCPRFPPPLLPALLPALPFLLSPLTYP 145
The following BLAST results are available for this feature:
BLAST of EWM28893.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585111330|gb|EWM28893.1|1.342e-90100.00hypothetical protein Naga_102619g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1784rna1784Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications