EWM28908.1, cds1766 (CDS) Nannochloropsis gaditana

Overview
NameEWM28908.1
Unique Namecds1766
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:80527..81237 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28908.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101812g2.7441.mrna
GbkeyCDS
End range.
End range81237
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:80527..81237 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM28908.1 vs. NCBI_GenBank
Match: gi|585111359|gb|EWM28908.1| (hypothetical protein Naga_101812g2, partial [Nannochloropsis gaditana])

HSP 1 Score: 453.751 bits (1166), Expect = 4.922e-161
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0 
Query:    1 PPSLPPSLPPSLLPFLFTPPSSLSESCRSGSQHRSSSSPLTSLPPSLPPSLPARGHHRRLLHRLPHSHHLLGERGECHRRAGYPPLLSRQEEVLGLGALSRPPALPPALLPALSRLQTKVARGVAGGRRGREGGRRDWWMGWAMEDIVGITKKRINEGNGRGENGRRGGRTSTMRSSAAPPVELATWQGGGSPRGTGRQRRRWEAVGILYLGPPRRTIHVDGGVRGDQGGHRGDWM 236
            PPSLPPSLPPSLLPFLFTPPSSLSESCRSGSQHRSSSSPLTSLPPSLPPSLPARGHHRRLLHRLPHSHHLLGERGECHRRAGYPPLLSRQEEVLGLGALSRPPALPPALLPALSRLQTKVARGVAGGRRGREGGRRDWWMGWAMEDIVGITKKRINEGNGRGENGRRGGRTSTMRSSAAPPVELATWQGGGSPRGTGRQRRRWEAVGILYLGPPRRTIHVDGGVRGDQGGHRGDWM
Sbjct:    1 PPSLPPSLPPSLLPFLFTPPSSLSESCRSGSQHRSSSSPLTSLPPSLPPSLPARGHHRRLLHRLPHSHHLLGERGECHRRAGYPPLLSRQEEVLGLGALSRPPALPPALLPALSRLQTKVARGVAGGRRGREGGRRDWWMGWAMEDIVGITKKRINEGNGRGENGRRGGRTSTMRSSAAPPVELATWQGGGSPRGTGRQRRRWEAVGILYLGPPRRTIHVDGGVRGDQGGHRGDWM 236
The following BLAST results are available for this feature:
BLAST of EWM28908.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585111359|gb|EWM28908.1|4.922e-161100.00hypothetical protein Naga_101812g2, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1770rna1770Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications