EWM28909.1, cds1764 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28909.1 vs. NCBI_GenBank
Match: gi|585111361|gb|EWM28909.1| (phosphatidylglycerophosphate synthase 1 [Nannochloropsis gaditana]) HSP 1 Score: 547.74 bits (1410), Expect = 0.000e+0 Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 0
Query: 1 MNLYASACCYCLRPIAACETLSLMSYRLLRRRQHRNLLSASCLTLKPRSPPTVFMSTTTTSSSRSSTFPSPSPHAFLSSLLENAHAPRTPLFPLRASSVSFLPDPPAFYQTLLDAIARSHDRITLSALYLGHGPMEQALVQHILAACHKKPNLRVQILLDHSRGTRGHRQGTSSLTTLAPLLSLTRTRPSSTSLQPQAHVALLRMPQLSGPWARRFIPSPLNEVLAVSHVKALAFDDEEILLTGANLSHDYFSRRQDRRWHQLLKAWCGILGP 273
MNLYASACCYCLRPIAACETLSLMSYRLLRRRQHRNLLSASCLTLKPRSPPTVFMSTTTTSSSRSSTFPSPSPHAFLSSLLENAHAPRTPLFPLRASSVSFLPDPPAFYQTLLDAIARSHDRITLSALYLGHGPMEQALVQHILAACHKKPNLRVQILLDHSRGTRGHRQGTSSLTTLAPLLSLTRTRPSSTSLQPQAHVALLRMPQLSGPWARRFIPSPLNEVLAVSHVKALAFDDEEILLTGANLSHDYFSRRQDRRWHQLLKAWCGILGP
Sbjct: 1 MNLYASACCYCLRPIAACETLSLMSYRLLRRRQHRNLLSASCLTLKPRSPPTVFMSTTTTSSSRSSTFPSPSPHAFLSSLLENAHAPRTPLFPLRASSVSFLPDPPAFYQTLLDAIARSHDRITLSALYLGHGPMEQALVQHILAACHKKPNLRVQILLDHSRGTRGHRQGTSSLTTLAPLLSLTRTRPSSTSLQPQAHVALLRMPQLSGPWARRFIPSPLNEVLAVSHVKALAFDDEEILLTGANLSHDYFSRRQDRRWHQLLKAWCGILGP 273
BLAST of EWM28909.1 vs. NCBI_GenBank
Match: gi|553194733|ref|XP_005856023.1| (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, partial [Nannochloropsis gaditana CCMP526] >gi|422293036|gb|EKU20337.1| CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 514.612 bits (1324), Expect = 0.000e+0 Identity = 259/261 (99.23%), Postives = 259/261 (99.23%), Query Frame = 0
Query: 1 MNLYASACCYCLRPIAACETLSLMSYRLLRRRQHRNLLSASCLTLKPRSPPTVFMSTTTTSSSRSSTFPSPSPHAFLSSLLENAHAPRTPLFPLRASSVSFLPDPPAFYQTLLDAIARSHDRITLSALYLGHGPMEQALVQHILAACHKKPNLRVQILLDHSRGTRGHRQGTSSLTTLAPLLSLTRTRPSSTSLQPQAHVALLRMPQLSGPWARRFIPSPLNEVLAVSHVKALAFDDEEILLTGANLSHDYFSRRQDRRWH 261
MNLYASACCYCLRPIAACETLSLMSYRLLRRRQHRNLLSASCLTLKPRSPPTVFMSTTTTSSSRSSTFPSPSPHAFLSSLLENAHAPRTPLFPLRASSVSFLPDPPAFYQTLLDAIARSHDRITLSALYLGHGPMEQALVQHILAACHKKPNLRVQILLDHSRGTRGHRQGTSSLTTLAPLLSLTRTRPSSTSLQPQAHVALLRMPQLSGPWARRFIPSPLNEVLAVSHVKALAFDDEEILLTGANLSHDYFSRRQDR H
Sbjct: 1 MNLYASACCYCLRPIAACETLSLMSYRLLRRRQHRNLLSASCLTLKPRSPPTVFMSTTTTSSSRSSTFPSPSPHAFLSSLLENAHAPRTPLFPLRASSVSFLPDPPAFYQTLLDAIARSHDRITLSALYLGHGPMEQALVQHILAACHKKPNLRVQILLDHSRGTRGHRQGTSSLTTLAPLLSLTRTRPSSTSLQPQAHVALLRMPQLSGPWARRFIPSPLNEVLAVSHVKALAFDDEEILLTGANLSHDYFSRRQDRYVH 261
BLAST of EWM28909.1 vs. NCBI_GenBank
Match: gi|1214691011|gb|OWZ06060.1| (Phosphatidylglycerolphosphate synthase, partial [Phytophthora megakarya]) HSP 1 Score: 139.043 bits (349), Expect = 1.542e-34 Identity = 88/181 (48.62%), Postives = 112/181 (61.88%), Query Frame = 0
Query: 91 LFPLRASSVSFLPDPPAFYQTLLDAIARSHDRITLSALYLGHGPMEQALVQHILAACHKKPNLRVQILLDHSRGTRGHRQGTSSLTTLAPLLSLTRTRPSSTSLQPQAHVALLRMPQLSGPWARRFIPSPLNEVLAVSHVKALAFDDEEILLTGANLSHDYFSRRQDRRWHQLLKAWCGIL 271
LFPLR+S V+ L P FYQ LL I R+ R+++S+LYLG G +E+ALV + A KP L+VQI+LD+SRG RG SS+T LAPLL + P + L L R+PQLSG A+ +P P NE L VSH K DE ++L+GANLS DYF+ RQD R+ QL CG L
Sbjct: 5 LFPLRSSDVALLASPTDFYQQLLRNIQRAEHRVSISSLYLGTGQLERALVDALAARLRDKPKLQVQIVLDYSRGQRGG-VSASSVTMLAPLL---KEFPDNVEL------FLFRVPQLSGLKAK--LPPPFNETLGVSHAKVYLV-DETLVLSGANLSADYFTNRQD-RYVQLTD--CGAL 169
BLAST of EWM28909.1 vs. NCBI_GenBank
Match: gi|695434527|ref|XP_009531443.1| (phosphatidylglycerolphosphate synthase [Phytophthora sojae] >gi|348674195|gb|EGZ14014.1| phosphatidylglycerolphosphate synthase [Phytophthora sojae]) HSP 1 Score: 138.658 bits (348), Expect = 2.994e-34 Identity = 85/181 (46.96%), Postives = 115/181 (63.54%), Query Frame = 0
Query: 91 LFPLRASSVSFLPDPPAFYQTLLDAIARSHDRITLSALYLGHGPMEQALVQHILAACHKKPNLRVQILLDHSRGTRGHRQGTSSLTTLAPLLSLTRTRPSSTSLQPQAHVALLRMPQLSGPWARRFIPSPLNEVLAVSHVKALAFDDEEILLTGANLSHDYFSRRQDRRWHQLLKAWCGIL 271
LFPLR+S V+ LP P AFY+ LL I + R+++S+LYLG G +E+ALV + + ++P L+VQ++LD+SRG RG SS+T LAPLL + P + L L R+PQLSG A+ +P P NE L VSH K DD ++L+GANLS DYF+ RQD R+ QL + CG L
Sbjct: 22 LFPLRSSDVALLPSPSAFYRQLLRNIQHAERRVSISSLYLGTGQLEEALVDALASRLRERPELQVQVVLDYSRGQRGGLT-ASSVTMLAPLL---KEFPDNVEL------FLFRVPQLSGIKAK--LPPPFNETLGVSHAKVYLVDD-TLVLSGANLSDDYFTNRQD-RYVQLTQ--CGGL 186
BLAST of EWM28909.1 vs. NCBI_GenBank
Match: gi|568017069|gb|ETL91246.1| (hypothetical protein L917_10190 [Phytophthora parasitica]) HSP 1 Score: 135.576 bits (340), Expect = 6.525e-34 Identity = 84/182 (46.15%), Postives = 112/182 (61.54%), Query Frame = 0
Query: 91 LFPLRASSVSFLPDPPAFYQTLLDAIARSHDRITLSALYLGHGPMEQALVQHILAACHKKPNLRVQILLDHSRGTRGHRQGTSSLTTLAPLLSLTRTRPSSTSLQPQAHVALLRMPQLSGPWARRFIPSPLNEVLAVSHVKALAFDDEEILLTGANLSHDYFSRRQDRRWHQLLKAWCGILG 272
LFPLR+S V+ L P FYQ L+ I + RI++S+LYLG G +E+ LV + ++P L+VQI+LD+SRG RG SS+T LAPLL + P++ L L R+PQLSG A+ +P P NE L VSH K DD ++L+GANLS+DYF+ RQD R+ QL CG L
Sbjct: 29 LFPLRSSDVALLATPTDFYQQLVHNIQHAETRISISSLYLGTGQLERDLVDALATRLKERPQLQVQIVLDYSRGQRGGVTA-SSVTMLAPLL---KQFPNNVEL------FLFRVPQLSGFKAK--LPPPFNETLGVSHAKVYLVDD-TLVLSGANLSNDYFTNRQD-RYVQLTS--CGALA 194
BLAST of EWM28909.1 vs. NCBI_GenBank
Match: gi|301100085|ref|XP_002899133.1| (CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase, putative [Phytophthora infestans T30-4] >gi|262104445|gb|EEY62497.1| CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase, putative [Phytophthora infestans T30-4]) HSP 1 Score: 134.42 bits (337), Expect = 9.056e-33 Identity = 85/181 (46.96%), Postives = 112/181 (61.88%), Query Frame = 0
Query: 91 LFPLRASSVSFLPDPPAFYQTLLDAIARSHDRITLSALYLGHGPMEQALVQHILAACHKKPNLRVQILLDHSRGTRGHRQGTSSLTTLAPLLSLTRTRPSSTSLQPQAHVALLRMPQLSGPWARRFIPSPLNEVLAVSHVKALAFDDEEILLTGANLSHDYFSRRQDRRWHQLLKAWCGIL 271
LFPLR+S V+ L P FYQ L+ I + RI++S+LYLG G +E LV + A ++P L+VQI+LD+SRG RG SS+T LAPLL + P++ L L R+PQLSG A+ +P P NE L VSH K DD ++L+GANLS+DYF+ RQD R+ QL CG L
Sbjct: 23 LFPLRSSDVTLLATPTDFYQQLVHNIQLAETRISISSLYLGTGQLESDLVDALAARLKERPQLQVQIVLDYSRGQRGGVTA-SSVTMLAPLL---KQFPNNVEL------FLFRVPQLSGLKAK--LPPPFNETLGVSHAKVYLVDD-TLVLSGANLSNDYFTNRQD-RYVQLTN--CGAL 187
BLAST of EWM28909.1 vs. NCBI_GenBank
Match: gi|570982524|gb|ETP42614.1| (hypothetical protein F442_10493 [Phytophthora parasitica P10297]) HSP 1 Score: 133.65 bits (335), Expect = 2.028e-32 Identity = 84/181 (46.41%), Postives = 112/181 (61.88%), Query Frame = 0
Query: 91 LFPLRASSVSFLPDPPAFYQTLLDAIARSHDRITLSALYLGHGPMEQALVQHILAACHKKPNLRVQILLDHSRGTRGHRQGTSSLTTLAPLLSLTRTRPSSTSLQPQAHVALLRMPQLSGPWARRFIPSPLNEVLAVSHVKALAFDDEEILLTGANLSHDYFSRRQDRRWHQLLKAWCGIL 271
LFPLR+S V+ L P FYQ L+ I + RI++S+LYLG G +E+ LV + ++P L+VQI+LD+SRG RG SS+T LAPLL + P++ L L R+PQLSG A+ +P P NE L VSH K DD ++L+GANLS+DYF+ RQD R+ QL CG L
Sbjct: 29 LFPLRSSDVALLATPTDFYQQLVHNIQHAETRISISSLYLGTGQLERDLVDALATRLKERPQLQVQIVLDYSRGQRGGVTA-SSVTMLAPLL---KQFPNNVEL------FLFRVPQLSGLKAK--LPPPFNETLGVSHAKVYLVDD-TLVLSGANLSNDYFTNRQD-RYVQLTS--CGAL 193
BLAST of EWM28909.1 vs. NCBI_GenBank
Match: gi|566021812|gb|ETI44723.1| (hypothetical protein F443_10600 [Phytophthora parasitica P1569]) HSP 1 Score: 133.65 bits (335), Expect = 2.201e-32 Identity = 84/181 (46.41%), Postives = 112/181 (61.88%), Query Frame = 0
Query: 91 LFPLRASSVSFLPDPPAFYQTLLDAIARSHDRITLSALYLGHGPMEQALVQHILAACHKKPNLRVQILLDHSRGTRGHRQGTSSLTTLAPLLSLTRTRPSSTSLQPQAHVALLRMPQLSGPWARRFIPSPLNEVLAVSHVKALAFDDEEILLTGANLSHDYFSRRQDRRWHQLLKAWCGIL 271
LFPLR+S V+ L P FYQ L+ I + RI++S+LYLG G +E+ LV + ++P L+VQI+LD+SRG RG SS+T LAPLL + P++ L L R+PQLSG A+ +P P NE L VSH K DD ++L+GANLS+DYF+ RQD R+ QL CG L
Sbjct: 29 LFPLRSSDVALLATPTDFYQQLVHNIQHAETRISISSLYLGTGQLERDLVDALATRLKERPQLQVQIVLDYSRGQRGGVTA-SSVTMLAPLL---KQFPNNVEL------FLFRVPQLSGFKAK--LPPPFNETLGVSHAKVYLVDD-TLVLSGANLSNDYFTNRQD-RYVQLTS--CGAL 193
BLAST of EWM28909.1 vs. NCBI_GenBank
Match: gi|567959122|gb|ETK84701.1| (hypothetical protein L915_10358 [Phytophthora parasitica] >gi|568047483|gb|ETM44562.1| hypothetical protein L914_10219 [Phytophthora parasitica] >gi|570325403|gb|ETO73351.1| hypothetical protein F444_10699 [Phytophthora parasitica P1976] >gi|570949277|gb|ETP14534.1| hypothetical protein F441_10542 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 133.65 bits (335), Expect = 2.461e-32 Identity = 84/181 (46.41%), Postives = 112/181 (61.88%), Query Frame = 0
Query: 91 LFPLRASSVSFLPDPPAFYQTLLDAIARSHDRITLSALYLGHGPMEQALVQHILAACHKKPNLRVQILLDHSRGTRGHRQGTSSLTTLAPLLSLTRTRPSSTSLQPQAHVALLRMPQLSGPWARRFIPSPLNEVLAVSHVKALAFDDEEILLTGANLSHDYFSRRQDRRWHQLLKAWCGIL 271
LFPLR+S V+ L P FYQ L+ I + RI++S+LYLG G +E+ LV + ++P L+VQI+LD+SRG RG SS+T LAPLL + P++ L L R+PQLSG A+ +P P NE L VSH K DD ++L+GANLS+DYF+ RQD R+ QL CG L
Sbjct: 29 LFPLRSSDVALLATPTDFYQQLVHNIQHAETRISISSLYLGTGQLERDLVDALATRLKERPQLQVQIVLDYSRGQRGGVTA-SSVTMLAPLL---KQFPNNVEL------FLFRVPQLSGLKAK--LPPPFNETLGVSHAKVYLVDD-TLVLSGANLSNDYFTNRQD-RYVQLTS--CGAL 193
BLAST of EWM28909.1 vs. NCBI_GenBank
Match: gi|567987846|gb|ETL38138.1| (hypothetical protein L916_10257 [Phytophthora parasitica]) HSP 1 Score: 132.88 bits (333), Expect = 4.579e-32 Identity = 84/181 (46.41%), Postives = 112/181 (61.88%), Query Frame = 0
Query: 91 LFPLRASSVSFLPDPPAFYQTLLDAIARSHDRITLSALYLGHGPMEQALVQHILAACHKKPNLRVQILLDHSRGTRGHRQGTSSLTTLAPLLSLTRTRPSSTSLQPQAHVALLRMPQLSGPWARRFIPSPLNEVLAVSHVKALAFDDEEILLTGANLSHDYFSRRQDRRWHQLLKAWCGIL 271
LFPLR+S V+ L P FYQ L+ I + RI++S+LYLG G +E+ LV + ++P L+VQI+LD+SRG RG SS+T LAPLL + P++ L L R+PQLSG A+ +P P NE L VSH K DD ++L+GANLS+DYF+ RQD R+ QL CG L
Sbjct: 29 LFPLRSSDVALLATPTDFYQQLVHNIQHAETRISISSLYLGTGHLERDLVDALATRLKERPQLQVQIVLDYSRGQRGGVTA-SSVTMLAPLL---KQFPNNVEL------FLFRVPQLSGLKAK--LPPPFNETLGVSHAKVYLVDD-TLVLSGANLSNDYFTNRQD-RYVQLTS--CGAL 193 The following BLAST results are available for this feature:
BLAST of EWM28909.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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