EWM28910.1, cds1763 (CDS) Nannochloropsis gaditana

Overview
NameEWM28910.1
Unique Namecds1763
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:76258..76396 +
Alignment locationCM002458.1:76756..76886 +
Alignment locationCM002458.1:77080..77274 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28910.1
Productfyve finger-containing phosphoinositide
Orig transcript idgnl|cribi|Naga_101156g1.9569.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:76258..76396 +
CM002458.1supercontigCM002458.1:76756..76886 +
CM002458.1supercontigCM002458.1:77080..77274 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
GO:0000166nucleotide binding
GO:0005524ATP binding
GO:0016307phosphatidylinositol phosphate kinase activity
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
GO:0046488phosphatidylinositol metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR002423Cpn60/TCP-1
IPR002498PInositol-4-P-5-kinase_core
IPR027483PInositol-4-P-5-kinase_C
IPR016034PInositol-4P-5-kinase_core_sub
Homology
BLAST of EWM28910.1 vs. NCBI_GenBank
Match: gi|585111362|gb|EWM28910.1| (fyve finger-containing phosphoinositide [Nannochloropsis gaditana])

HSP 1 Score: 311.997 bits (798), Expect = 1.172e-107
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0
Query:    1 MSSVAPSGREKEEGGKGASASKPQPRQQQRIISRTLLDENLSEFTKGKPLPLYILDQAYFMRAMINDISFLSYIKIIDYSILIGVDEEQKALVVGIIDYMRQYDIIKKMERMGKSVGMIAGQAEPTVIQPQPYRARFLGAMEKYFAGIPDKWTP 154
            MSSVAPSGREKEEGGKGASASKPQPRQQQRIISRTLLDENLSEFTKGKPLPLYILDQAYFMRAMINDISFLSYIKIIDYSILIGVDEEQKALVVGIIDYMRQYDIIKKMERMGKSVGMIAGQAEPTVIQPQPYRARFLGAMEKYFAGIPDKWTP
Sbjct:    1 MSSVAPSGREKEEGGKGASASKPQPRQQQRIISRTLLDENLSEFTKGKPLPLYILDQAYFMRAMINDISFLSYIKIIDYSILIGVDEEQKALVVGIIDYMRQYDIIKKMERMGKSVGMIAGQAEPTVIQPQPYRARFLGAMEKYFAGIPDKWTP 154          
BLAST of EWM28910.1 vs. NCBI_GenBank
Match: gi|676392519|ref|XP_009039537.1| (hypothetical protein AURANDRAFT_54488 [Aureococcus anophagefferens] >gi|323449813|gb|EGB05698.1| hypothetical protein AURANDRAFT_54488 [Aureococcus anophagefferens])

HSP 1 Score: 182.57 bits (462), Expect = 9.203e-54
Identity = 90/141 (63.83%), Postives = 106/141 (75.18%), Query Frame = 0
Query:   16 KGASASKPQPRQQQRIISR---TLLDENLSEFTKGKPLPLYILDQAYFMRAMINDISFLSYIKIIDYSILIGVDEEQKALVVGIIDYMRQYDIIKKMERMGKSVGMIAGQAEPTVIQPQPYRARFLGAMEKYFAGIPDKWT 153
            KG++ S+   RQ + +  +    LLDEN  EFT G+PLPL    +AYF  A++ND  FLS I ++DYSIL+G+DEE   LVVGIIDYMRQYDIIKKMERMGKSVGMIAGQAEPTVIQP  YR RF  AME+YF  +PDKWT
Sbjct:  220 KGSTRSR-YARQAETLSCKAHPVLLDENFMEFTNGRPLPLRDQAKAYFNSAVLNDTLFLSLINVVDYSILVGMDEENHELVVGIIDYMRQYDIIKKMERMGKSVGMIAGQAEPTVIQPPNYRNRFQAAMERYFMMVPDKWT 359          
BLAST of EWM28910.1 vs. NCBI_GenBank
Match: gi|298713473|emb|CBJ27028.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 167.933 bits (424), Expect = 2.749e-45
Identity = 75/120 (62.50%), Postives = 98/120 (81.67%), Query Frame = 0
Query:   34 RTLLDENLSEFTKGKPLPLYILDQAYFMRAMINDISFLSYIKIIDYSILIGVDEEQKALVVGIIDYMRQYDIIKKMERMGKSVGMIAGQAEPTVIQPQPYRARFLGAMEKYFAGIPDKWT 153
            + LLDEN  E+T+G+PLP+  L +A F  A++ND  FL+ + I+DYSI++G+DEE++ LVVGIIDYMRQYDIIK+MERMGKSV MIAGQAEPT++QP  Y+ RF  AM++YF  +PDKWT
Sbjct: 3076 QVLLDENFMEYTEGQPLPMQDLGKAVFHTAILNDTLFLNIVNIVDYSIVVGLDEERRELVVGIIDYMRQYDIIKRMERMGKSVSMIAGQAEPTIVQPSLYKTRFQQAMDRYFMTVPDKWT 3195          
BLAST of EWM28910.1 vs. NCBI_GenBank
Match: gi|224012713|ref|XP_002295009.1| (hypothetical protein THAPSDRAFT_270069 [Thalassiosira pseudonana CCMP1335] >gi|220969448|gb|EED87789.1| hypothetical protein THAPSDRAFT_270069 [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 150.984 bits (380), Expect = 7.464e-42
Identity = 68/119 (57.14%), Postives = 90/119 (75.63%), Query Frame = 0
Query:   35 TLLDENLSEFTKGKPLPLYILDQAYFMRAMINDISFLSYIKIIDYSILIGVDEEQKALVVGIIDYMRQYDIIKKMERMGKSVGMIAGQAEPTVIQPQPYRARFLGAMEKYFAGIPDKWT 153
            TLLD +  EFT G+PLPL    +A F  +++ND  FLS I ++DYSIL+G+DEE+  LVVGIID+MRQYDI+K+MER+GKS+ M+ G   PT+IQP  Y++RF  AME+YF  +P KWT
Sbjct:  202 TLLDGDFLEFTGGRPLPLTDRAKAVFHMSILNDTLFLSIINVLDYSILVGIDEERMELVVGIIDFMRQYDILKQMERVGKSLPMVVGSEAPTIIQPPLYKSRFTNAMERYFMTVPSKWT 320          
BLAST of EWM28910.1 vs. NCBI_GenBank
Match: gi|1072237360|gb|OEU22087.1| (SAICAR synthase-like protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 149.443 bits (376), Expect = 2.319e-41
Identity = 67/120 (55.83%), Postives = 91/120 (75.83%), Query Frame = 0
Query:   34 RTLLDENLSEFTKGKPLPLYILDQAYFMRAMINDISFLSYIKIIDYSILIGVDEEQKALVVGIIDYMRQYDIIKKMERMGKSVGMIAGQAEPTVIQPQPYRARFLGAMEKYFAGIPDKWT 153
            RTLLD +  E T G+P+P++   +A F  +++ND  FLS I ++DYSIL+G+DEE+  LVVGIID+MRQYDI+K+MER+GKS+ M+ G   PT+IQP  Y+ARF  AME+YF  +P KWT
Sbjct:  194 RTLLDGDFLEETFGRPMPMHDRAKAVFHMSILNDTLFLSIINVLDYSILVGIDEEKMELVVGIIDFMRQYDILKQMERVGKSLPMVVGSEAPTIIQPPLYKARFTNAMERYFMTVPSKWT 313          
BLAST of EWM28910.1 vs. NCBI_GenBank
Match: gi|1210524272|dbj|GAX17001.1| (1-phosphatidylinositol-3-phosphate 5-kinase [Fistulifera solaris])

HSP 1 Score: 153.68 bits (387), Expect = 2.747e-40
Identity = 69/119 (57.98%), Postives = 90/119 (75.63%), Query Frame = 0
Query:   35 TLLDENLSEFTKGKPLPLYILDQAYFMRAMINDISFLSYIKIIDYSILIGVDEEQKALVVGIIDYMRQYDIIKKMERMGKSVGMIAGQAEPTVIQPQPYRARFLGAMEKYFAGIPDKWT 153
            TLLD +  EFT+G+PLPL    +A F  +++ND  FLS I ++DYSIL+GVDEE   LVVGIID+MRQYDI+K+MER+GKS+ M+ G   PT+IQP  Y+ARF  AME+YF  +P+ WT
Sbjct: 1411 TLLDGDFLEFTRGRPLPLTDRAKALFQMSILNDTLFLSIINVLDYSILVGVDEESNELVVGIIDFMRQYDILKQMERVGKSLPMVVGSEAPTIIQPPLYKARFTNAMERYFMTVPNTWT 1529          
BLAST of EWM28910.1 vs. NCBI_GenBank
Match: gi|1210515774|dbj|GAX25297.1| (1-phosphatidylinositol-3-phosphate 5-kinase [Fistulifera solaris])

HSP 1 Score: 152.525 bits (384), Expect = 7.448e-40
Identity = 68/119 (57.14%), Postives = 90/119 (75.63%), Query Frame = 0
Query:   35 TLLDENLSEFTKGKPLPLYILDQAYFMRAMINDISFLSYIKIIDYSILIGVDEEQKALVVGIIDYMRQYDIIKKMERMGKSVGMIAGQAEPTVIQPQPYRARFLGAMEKYFAGIPDKWT 153
            TLLD +  EFT+G+PLPL    +A F  +++ND  FLS I ++DYSIL+GVDE+   LVVGIID+MRQYDI+K+MER+GKS+ M+ G   PT+IQP  Y+ARF  AME+YF  +P+ WT
Sbjct: 1413 TLLDGDFLEFTRGRPLPLTDRAKALFQMSILNDTLFLSIINVLDYSILVGVDEDSNELVVGIIDFMRQYDILKQMERVGKSLPMVVGSEAPTIIQPPLYKARFTNAMERYFMTVPNTWT 1531          
BLAST of EWM28910.1 vs. NCBI_GenBank
Match: gi|397565669|gb|EJK44719.1| (hypothetical protein THAOC_36718, partial [Thalassiosira oceanica])

HSP 1 Score: 145.976 bits (367), Expect = 1.254e-37
Identity = 70/147 (47.62%), Postives = 97/147 (65.99%), Query Frame = 0
Query:    7 SGREKEEGGKGASASKPQPRQQQRIISRTLLDENLSEFTKGKPLPLYILDQAYFMRAMINDISFLSYIKIIDYSILIGVDEEQKALVVGIIDYMRQYDIIKKMERMGKSVGMIAGQAEPTVIQPQPYRARFLGAMEKYFAGIPDKWT 153
            S     EG +  ++   + R++      TLLD +  EFT G+PLPL    +A F  +++ND  FLS I ++DYSIL+G+DE    LVVGIID+MRQYDI+K+MER+GKS+ M+ G   PT+IQP  Y++RF  AME+YF   P+ WT
Sbjct: 1242 SQSSSSEGDEKETSETEKSRERSEPSIPTLLDGDFLEFTAGRPLPLTDRAKAVFHMSILNDTLFLSIINVLDYSILVGIDESAGELVVGIIDFMRQYDILKQMERVGKSLPMVVGSEAPTIIQPPLYKSRFTNAMERYFMTTPNTWT 1388          
BLAST of EWM28910.1 vs. NCBI_GenBank
Match: gi|950897341|ref|XP_014529283.1| (1-phosphatidylinositol-3-phosphate 5-kinase [Blastocystis sp. subtype 4] >gi|902863894|gb|KNB45840.1| 1-phosphatidylinositol-3-phosphate 5-kinase [Blastocystis sp. subtype 4])

HSP 1 Score: 129.798 bits (325), Expect = 1.966e-32
Identity = 64/118 (54.24%), Postives = 81/118 (68.64%), Query Frame = 0
Query:   35 TLLDENLSEFTKGKPLPLYILDQAYFMRAMINDISFLSYIKIIDYSILIGVDEEQKALVVGIIDYMRQYDIIKKMERMGKSVGMIAGQAEPTVIQPQPYRARFLGAMEKYFAGIPDKW 152
            TLLD N  E  KG PLPL+   +      +IND  FLS + ++DYS+L+GV+EE K LVVGIIDY R YDIIKK+E   KSVGMI G+ EPTVI P  Y+ RF  +M+ YF  +PD++
Sbjct:  289 TLLDMNFMEKRKGVPLPLHESSKTLLNIGIINDTLFLSIVNVVDYSLLVGVNEETKELVVGIIDYFRCYDIIKKIENGVKSVGMIIGEKEPTVIPPNLYKKRFRVSMDSYFITMPDRY 406          
BLAST of EWM28910.1 vs. NCBI_GenBank
Match: gi|1032153499|gb|OAO16824.1| (phosphatidylinositol-3-phosphate 5-kinase, Fab1 [Blastocystis sp. ATCC 50177/Nand II])

HSP 1 Score: 129.798 bits (325), Expect = 6.959e-32
Identity = 62/118 (52.54%), Postives = 82/118 (69.49%), Query Frame = 0
Query:   35 TLLDENLSEFTKGKPLPLYILDQAYFMRAMINDISFLSYIKIIDYSILIGVDEEQKALVVGIIDYMRQYDIIKKMERMGKSVGMIAGQAEPTVIQPQPYRARFLGAMEKYFAGIPDKW 152
            TLLD N  E  KG PLPL+   ++     +IND  FLS I ++DYS+L+GV+EE+  LVVGIIDY R YD+IKK+E   KSVGMI G+ EPT+I P  Y+ RF  +M+ YF  +PD++
Sbjct: 1256 TLLDMNFMEKRKGIPLPLHESSKSLLNVGIINDTLFLSIINVVDYSLLVGVNEEKNELVVGIIDYFRCYDLIKKIENGVKSVGMIIGEKEPTIIPPNLYKKRFRLSMDSYFITMPDRY 1373          
The following BLAST results are available for this feature:
BLAST of EWM28910.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111362|gb|EWM28910.1|1.172e-107100.00fyve finger-containing phosphoinositide [Nannochlo... [more]
gi|676392519|ref|XP_009039537.1|9.203e-5463.83hypothetical protein AURANDRAFT_54488 [Aureococcus... [more]
gi|298713473|emb|CBJ27028.1|2.749e-4562.50conserved unknown protein [Ectocarpus siliculosus][more]
gi|224012713|ref|XP_002295009.1|7.464e-4257.14hypothetical protein THAPSDRAFT_270069 [Thalassios... [more]
gi|1072237360|gb|OEU22087.1|2.319e-4155.83SAICAR synthase-like protein [Fragilariopsis cylin... [more]
gi|1210524272|dbj|GAX17001.1|2.747e-4057.981-phosphatidylinositol-3-phosphate 5-kinase [Fistu... [more]
gi|1210515774|dbj|GAX25297.1|7.448e-4057.141-phosphatidylinositol-3-phosphate 5-kinase [Fistu... [more]
gi|397565669|gb|EJK44719.1|1.254e-3747.62hypothetical protein THAOC_36718, partial [Thalass... [more]
gi|950897341|ref|XP_014529283.1|1.966e-3254.241-phosphatidylinositol-3-phosphate 5-kinase [Blast... [more]
gi|1032153499|gb|OAO16824.1|6.959e-3252.54phosphatidylinositol-3-phosphate 5-kinase, Fab1 [B... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1767rna1767Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications