EWM28919.1, cds1756 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28919.1 vs. NCBI_GenBank
Match: gi|585111383|gb|EWM28919.1| (hypothetical protein Naga_100441g1 [Nannochloropsis gaditana]) HSP 1 Score: 238.81 bits (608), Expect = 9.226e-80 Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0 Query: 1 MKTVPKYMTAVVVKDKMEEWLDPVPENADNARSLLVQRSAIKAVTAGLAGAVLTNPLDVVRNECFKREQSLGPTLRGLVEEEGARFLWRGMGKNVVAVTIPVAATIFLADIISRARGL 118 MKTVPKYMTAVVVKDKMEEWLDPVPENADNARSLLVQRSAIKAVTAGLAGAVLTNPLDVVRNECFKREQSLGPTLRGLVEEEGARFLWRGMGKNVVAVTIPVAATIFLADIISRARGL Sbjct: 1 MKTVPKYMTAVVVKDKMEEWLDPVPENADNARSLLVQRSAIKAVTAGLAGAVLTNPLDVVRNECFKREQSLGPTLRGLVEEEGARFLWRGMGKNVVAVTIPVAATIFLADIISRARGL 118
BLAST of EWM28919.1 vs. NCBI_GenBank
Match: gi|553182682|ref|XP_005853766.1| (hypothetical protein NGA_0472300 [Nannochloropsis gaditana CCMP526] >gi|422295294|gb|EKU22593.1| hypothetical protein NGA_0472300 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 208.379 bits (529), Expect = 1.005e-65 Identity = 102/103 (99.03%), Postives = 102/103 (99.03%), Query Frame = 0 Query: 16 KMEEWLDPVPENADNARSLLVQRSAIKAVTAGLAGAVLTNPLDVVRNECFKREQSLGPTLRGLVEEEGARFLWRGMGKNVVAVTIPVAATIFLADIISRARGL 118 KMEEWLDPVPEN DNARSLLVQRSAIKAVTAGLAGAVLTNPLDVVRNECFKREQSLGPTLRGLVEEEGARFLWRGMGKNVVAVTIPVAATIFLADIISRARGL Sbjct: 159 KMEEWLDPVPENVDNARSLLVQRSAIKAVTAGLAGAVLTNPLDVVRNECFKREQSLGPTLRGLVEEEGARFLWRGMGKNVVAVTIPVAATIFLADIISRARGL 261
BLAST of EWM28919.1 vs. NCBI_GenBank
Match: gi|514695593|ref|XP_004995367.1| (hypothetical protein PTSG_03639 [Salpingoeca rosetta] >gi|326437433|gb|EGD83003.1| hypothetical protein PTSG_03639 [Salpingoeca rosetta]) HSP 1 Score: 126.331 bits (316), Expect = 1.622e-33 Identity = 64/114 (56.14%), Postives = 86/114 (75.44%), Query Frame = 0 Query: 1 MKTVPKYMTAVVVKDKMEEWLDPVPENADNARSLLVQRSAIKAVTAGLAGAVLTNPLDVVRNECFKREQSLGPTLRGLVEEEGARFLWRGMGKNVVAVTIPVAATIFLADIISR 114 KTVPKY+TAV VK+ M+EWL PV ++ D R+ ++ RSA K+V AGLAGA LTNPLDV+RN F+ E S+ T++ L ++G RFL++G+GKN+VAV +PV+ TIFL D SR Sbjct: 155 FKTVPKYVTAVYVKEMMDEWLAPV-DSTD--RTAVLVRSAKKSVIAGLAGATLTNPLDVIRNTMFQTETSMFQTIKHLHAKKGWRFLYQGLGKNLVAVAVPVSLTIFLTDAFSR 265
BLAST of EWM28919.1 vs. NCBI_GenBank
Match: gi|551575420|ref|XP_005773432.1| (hypothetical protein EMIHUDRAFT_435784 [Emiliania huxleyi CCMP1516] >gi|485625044|gb|EOD21003.1| hypothetical protein EMIHUDRAFT_435784 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 126.331 bits (316), Expect = 5.616e-33 Identity = 63/113 (55.75%), Postives = 80/113 (70.80%), Query Frame = 0 Query: 2 KTVPKYMTAVVVKDKMEEWLD--PVPENADNARSLLVQRSAIKAVTAGLAGAVLTNPLDVVRNECFKREQSLGPTLRGLVEEEGARFLWRGMGKNVVAVTIPVAATIFLADII 112 KTVPKY+ A+ VKD M+E L P A RS ++Q SA+K++ AG+AGA LTNPLDV+RNE FK +++LG T R L+ EGA FLWRGM +N+VAV P+ TIFL D I Sbjct: 156 KTVPKYVVAIWVKDAMQELLPKPTAPPGAPGHRSQVLQASAVKSIAAGVAGAALTNPLDVIRNEMFKTDEALGETTRRLLRREGASFLWRGMARNLVAVAAPIGMTIFLTDAI 268
BLAST of EWM28919.1 vs. NCBI_GenBank
Match: gi|167538161|ref|XP_001750746.1| (hypothetical protein [Monosiga brevicollis MX1] >gi|163770770|gb|EDQ84451.1| predicted protein [Monosiga brevicollis MX1]) HSP 1 Score: 118.627 bits (296), Expect = 3.176e-31 Identity = 60/113 (53.10%), Postives = 77/113 (68.14%), Query Frame = 0 Query: 2 KTVPKYMTAVVVKDKMEEWLDPVPENADNARSLLVQRSAIKAVTAGLAGAVLTNPLDVVRNECFKREQSLGPTLRGLVEEEGARFLWRGMGKNVVAVTIPVAATIFLADIISR 114 KTVPKY+TAV+VK M+ L PV + D L+ RSA KAV AG AGA+LTNP DV+RN F+ + + P +R L + EG RF+WRG+ KN++AV IPV TIFL DI + Sbjct: 91 KTVPKYVTAVLVKQAMDRSLAPVNKEQDRLGWLV--RSAKKAVVAGTAGAILTNPFDVIRNHMFRTDLGMVPAIRSLYQTEGPRFVWRGVAKNMIAVAIPVTVTIFLTDIFEQ 201
BLAST of EWM28919.1 vs. NCBI_GenBank
Match: gi|219129847|ref|XP_002185091.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217403586|gb|EEC43538.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 118.242 bits (295), Expect = 3.391e-30 Identity = 60/110 (54.55%), Postives = 74/110 (67.27%), Query Frame = 0 Query: 1 MKTVPKYMTAVVVKDKMEEWLDPVPENADNARSLLVQRSAIKAVTAGLAGAVLTNPLDVVRNECFKREQSLGPTLRGLVEEEGARFLWRGMGKNVVAVTIPVAATIFLAD 110 +KTVPKY+TAVVVKD ME+ L P + + RSA K+ AG+AGA LTNPLDV+RNE FK L T+R L E EG F++RG+GKN++AV IPV TIF D Sbjct: 168 LKTVPKYITAVVVKDWMEQALPPADPLSKTYHQDRLWRSAAKSAMAGVAGAALTNPLDVIRNEMFKTNLGLAATVRHLQETEGYAFVYRGLGKNLIAVAIPVGCTIFFTD 277
BLAST of EWM28919.1 vs. NCBI_GenBank
Match: gi|1072238142|gb|OEU22869.1| (mitochondrial carrier [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 114.775 bits (286), Expect = 4.513e-29 Identity = 63/116 (54.31%), Postives = 79/116 (68.10%), Query Frame = 0 Query: 1 MKTVPKYMTAVVVKDKMEEWLDPVPE----NADNARSLLVQRSAIKAVTAGLAGAVLTNPLDVVRNECFKREQSLGPTLRGLVEEEGARFLWRGMGKNVVAVTIPVAATIFLADII 112 +KTVPKY TAV+VKD ME+ L + + D R + RSA K+ TAGLAGAVLTNPLDV+RNE FK +SL T+R L+ E G+ F RGM KN++AV IPV TIF D++ Sbjct: 118 LKTVPKYCTAVLVKDFMEDRLPQIDDISSPTYDRDR---LCRSAAKSATAGLAGAVLTNPLDVIRNEMFKTNESLPKTIRRLINETGSGFATRGMAKNMIAVAIPVGCTIFFTDVL 230
BLAST of EWM28919.1 vs. NCBI_GenBank
Match: gi|1072235542|gb|OEU20271.1| (mitochondrial carrier [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 107.842 bits (268), Expect = 1.035e-26 Identity = 55/112 (49.11%), Postives = 74/112 (66.07%), Query Frame = 0 Query: 1 MKTVPKYMTAVVVKDKMEEWLDPVPENADNARSLLVQRSAIKAVTAGLAGAVLTNPLDVVRNECFKREQSLGPTLRGLVEEEGARFLWRGMGKNVVAVTIPVAATIFLADII 112 +KTVPKY+TA+ VKD E L N+ ++ RSA+K+ AG+AGA LTNPLDV+RNE FK + L T R L E G +F+ RG+GKN++AV +PV TIF D++ Sbjct: 112 LKTVPKYVTAIAVKDYAERSLPKPDRNSRTYDRDMLWRSAVKSSMAGIAGAALTNPLDVIRNEQFKTDFGLLKTTRSLWNELGYKFMIRGLGKNMIAVALPVGVTIFCTDML 223
BLAST of EWM28919.1 vs. NCBI_GenBank
Match: gi|1210516146|dbj|GAX24962.1| (hypothetical protein FisN_2Lh238 [Fistulifera solaris]) HSP 1 Score: 106.686 bits (265), Expect = 7.250e-26 Identity = 61/110 (55.45%), Postives = 76/110 (69.09%), Query Frame = 0 Query: 1 MKTVPKYMTAVVVKDKMEEWLDPVPENADNARSLLVQRSAIKAVTAGLAGAVLTNPLDVVRNECFKREQSLGPTLRGLVEEEGARFLWRGMGKNVVAVTIPVAATIFLAD 110 +KTVPKY TAVVVK ME+WL P + ++ + RSA K+ AG+AGA LTNPLDV+RNE FK + PT++ L E G RFL RG+GKN++AV IPVA TIF D Sbjct: 157 LKTVPKYCTAVVVKGFMEDWLPPPTDPSER-----LWRSAYKSAAAGIAGAALTNPLDVIRNEMFKTNLEMTPTVQKLWRELGVRFLGRGLGKNMIAVAIPVACTIFFTD 261
BLAST of EWM28919.1 vs. NCBI_GenBank
Match: gi|1210528930|dbj|GAX12407.1| (hypothetical protein FisN_2Hh238 [Fistulifera solaris]) HSP 1 Score: 103.219 bits (256), Expect = 1.710e-24 Identity = 61/112 (54.46%), Postives = 76/112 (67.86%), Query Frame = 0 Query: 1 MKTVPKYMTAVVVKDKMEEWLDPVPENADNARSLLVQRSAIKAVTAGLAGAVLTNPLDVVRNECFKREQSLGPTLRGLVEEEGARFLWRGMGKNVVAVTIPVAATIFLADII 112 +K+VPKY TAVVVK ME+WL P + ++ + RSA K+ AG+AGA LTNPLDV+RNE FK L T++ L E G RFL RG+GKN+VAV IPVA TIF D + Sbjct: 157 LKSVPKYCTAVVVKGFMEDWLPPPTDPSER-----LWRSAYKSAAAGIAGAALTNPLDVIRNEMFKTNLELTATVQKLWRELGVRFLARGLGKNMVAVAIPVACTIFFTDAL 263 The following BLAST results are available for this feature:
BLAST of EWM28919.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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