EWM28923.1, cds1751 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28923.1 vs. NCBI_GenBank
Match: gi|585111389|gb|EWM28923.1| (eribonuclease p [Nannochloropsis gaditana]) HSP 1 Score: 457.218 bits (1175), Expect = 1.621e-162 Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0
Query: 1 MRLLHFLSFVSLSSAFLLPSLPSSSSPLSKRGRALASSASEELSRKEKSKEQVRSLLKGLGELDDEDGPSESGSSKRKEKREGVDAARRALADKDKMKLEPESVFFEGAPHWSEVVVPAISILTVIGIIPFASSVARQIWVKYKITSRRISVTSGVGGKDLTEVIYADIERINYVFRAFGTTGDMVLFLRDGAKLEIRSLPNFRDVYNYIRSQLDDDAREQTPALPEPK 229
MRLLHFLSFVSLSSAFLLPSLPSSSSPLSKRGRALASSASEELSRKEKSKEQVRSLLKGLGELDDEDGPSESGSSKRKEKREGVDAARRALADKDKMKLEPESVFFEGAPHWSEVVVPAISILTVIGIIPFASSVARQIWVKYKITSRRISVTSGVGGKDLTEVIYADIERINYVFRAFGTTGDMVLFLRDGAKLEIRSLPNFRDVYNYIRSQLDDDAREQTPALPEPK
Sbjct: 1 MRLLHFLSFVSLSSAFLLPSLPSSSSPLSKRGRALASSASEELSRKEKSKEQVRSLLKGLGELDDEDGPSESGSSKRKEKREGVDAARRALADKDKMKLEPESVFFEGAPHWSEVVVPAISILTVIGIIPFASSVARQIWVKYKITSRRISVTSGVGGKDLTEVIYADIERINYVFRAFGTTGDMVLFLRDGAKLEIRSLPNFRDVYNYIRSQLDDDAREQTPALPEPK 229
BLAST of EWM28923.1 vs. NCBI_GenBank
Match: gi|553184079|ref|XP_005854023.1| (ribonuclease p [Nannochloropsis gaditana CCMP526] >gi|422295034|gb|EKU22333.1| ribonuclease p [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 238.424 bits (607), Expect = 1.516e-77 Identity = 120/143 (83.92%), Postives = 120/143 (83.92%), Query Frame = 0
Query: 87 ARRALADKDKMKLEPESVFFEGAPHWSEVVVPAISILTVIGIIPFASSVARQIWVKYKITSRRISVTSGVGGKDLTEVIYADIERINYVFRAFGTTGDMVLFLRDGAKLEIRSLPNFRDVYNYIRSQLDDDAREQTPALPEPK 229
ARRALADKDKMKLEPESVFFEGAPHWSEVVVPAISILTVIGIIPFASSVARQIWV IYADIERINYVFRAFGTTGDMVLFLRDGAKLEIRSLPNFRDVYNYIRSQLDDDAREQTPALPEPK
Sbjct: 13 ARRALADKDKMKLEPESVFFEGAPHWSEVVVPAISILTVIGIIPFASSVARQIWV-----------------------IYADIERINYVFRAFGTTGDMVLFLRDGAKLEIRSLPNFRDVYNYIRSQLDDDAREQTPALPEPK 132
BLAST of EWM28923.1 vs. NCBI_GenBank
Match: gi|298711364|emb|CBJ32509.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 164.466 bits (415), Expect = 5.539e-47 Identity = 78/131 (59.54%), Postives = 98/131 (74.81%), Query Frame = 0
Query: 95 DKMKLEPESVFFEGAPHWSEVVVPAISILTVIGIIPFASSVARQIWVKYKITSRRISVTSGVGGKDLTEVIYADIERINYVFRAFGTTGDMVLFLRDGAKLEIRSLPNFRDVYNYIRSQLDDDAREQTPAL 225
+K+KLE E FFEG P SEVV PA+SILTVIGI+PF++++ARQ WVKY +TSRRI + SG GKD TEV+Y DI + YV+R FG GD+VL LRDG+KLEIRSLP+F YNYIR + +E++ L
Sbjct: 106 EKVKLEAEVTFFEGGPDPSEVVAPAVSILTVIGIVPFSAALARQAWVKYTLTSRRIKIVSGWNGKDTTEVVYPDIVDMVYVWRFFGRCGDLVLTLRDGSKLEIRSLPDFERNYNYIRERTSASCQEKSAVL 236
BLAST of EWM28923.1 vs. NCBI_GenBank
Match: gi|1189380246|gb|OSX68632.1| (hypothetical protein BU14_2468s0001 [Porphyra umbilicalis]) HSP 1 Score: 159.844 bits (403), Expect = 5.752e-46 Identity = 71/129 (55.04%), Postives = 96/129 (74.42%), Query Frame = 0
Query: 99 LEPESVFFEGAPHWSEVVVPAISILTVIGIIPFASSVARQIWVKYKITSRRISVTSGVGGKDLTEVIYADIERINYVFRAFGTTGDMVLFLRDGAKLEIRSLPNFRDVYNYIRSQLDDDAREQTPALPE 227
LEPE VF+EG P W EVV+P ++ILTV+G+IP+A +VARQ+WVKYK T+RRI+V SG G D TEV+Y DIE + +V R G DMVL L+DGA+LE+RSL F ++Y Y+ Q+D+D R+ + P+
Sbjct: 37 LEPEEVFYEGKPSWVEVVIPTVAILTVVGVIPWAGAVARQLWVKYKFTNRRIAVDSGFRGNDHTEVVYRDIEEVRFVRRFGGAAADMVLLLKDGARLELRSLDRFDELYEYVMGQVDEDTRQASNYTPK 165
BLAST of EWM28923.1 vs. NCBI_GenBank
Match: gi|676399111|ref|XP_009042833.1| (hypothetical protein AURANDRAFT_35230, partial [Aureococcus anophagefferens] >gi|323446218|gb|EGB02468.1| hypothetical protein AURANDRAFT_35230, partial [Aureococcus anophagefferens]) HSP 1 Score: 155.606 bits (392), Expect = 5.952e-45 Identity = 68/124 (54.84%), Postives = 95/124 (76.61%), Query Frame = 0
Query: 102 ESVFFEGAPHWSEVVVPAISILTVIGIIPFASSVARQIWVKYKITSRRISVTSGVGGKDLTEVIYADIERINYVFRAFGTTGDMVLFLRDGAKLEIRSLPNFRDVYNYIRSQLDDDAREQTPAL 225
E++FFEG P +E+V+PAISI+T+IG++PF ++ ARQ+WVKYKITSRRISV SG+GG D TE+IY+DI + YV+R GDMV+ LRDGAKLE+R +P F+D+Y YI S ++ + ++
Sbjct: 1 ETLFFEGPPSITELVLPAISIITIIGVVPFLAAAARQVWVKYKITSRRISVQSGLGGNDFTEIIYSDIVDLKYVYRGSKEVGDMVIELRDGAKLEMRHVPKFQDIYKYIYSLCSEECQATAASM 124
BLAST of EWM28923.1 vs. NCBI_GenBank
Match: gi|676381643|ref|XP_009034100.1| (hypothetical protein AURANDRAFT_16832, partial [Aureococcus anophagefferens] >gi|323455896|gb|EGB11764.1| hypothetical protein AURANDRAFT_16832, partial [Aureococcus anophagefferens]) HSP 1 Score: 150.599 bits (379), Expect = 3.136e-43 Identity = 67/109 (61.47%), Postives = 89/109 (81.65%), Query Frame = 0
Query: 102 ESVFFEGAPHWSEVVVPAISILTVIGIIPFASSVARQIWVKYKITSRRISVTSGVGGKDLTEVIYADIERINYVFRAFGTTGDMVLFLRDGAKLEIRSLPNFRDVYNYI 210
E++FFEG P +E+V+PAISI+T+IG++PF ++ ARQ+WVKYKITSRRISV SG+GG D TE+IY+DI + YV+R GDMV+ LRDGAKLE+R +P F+D+Y YI
Sbjct: 1 ETLFFEGPPSITELVLPAISIITIIGVVPFLAAAARQVWVKYKITSRRISVQSGLGGNDFTEIIYSDIVDLKYVYRGSKEVGDMVIELRDGAKLEMRHVPKFQDIYKYI 109
BLAST of EWM28923.1 vs. NCBI_GenBank
Match: gi|873240643|emb|CEL93264.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 153.295 bits (386), Expect = 3.147e-42 Identity = 74/136 (54.41%), Postives = 99/136 (72.79%), Query Frame = 0
Query: 79 EKREGVDAARRALADKDKM-KLEPESVFFEGAPHWSEVVVPAISILTVIGIIPFASSVARQIWVKYKITSRRISVTSGVGGKDLTEVIYADIERINYVFRAFGT--TGDMVLFLRDGAKLEIRSLPNFRDVYNYIR 211
++R V R+ D++K +LE E+ F P W+EVV+PAIS+LTV+GIIPFA +VARQIWVKY+ TSRRI VTSG+GG D TEVIY +I+ I V R FG GD+ + L+DG+KLEIRS+PNF +V +++
Sbjct: 130 QERAQVQKQRQVKKDQEKGPRLEAETAFMTTKPSWTEVVIPAISVLTVLGIIPFAGAVARQIWVKYEFTSRRIRVTSGIGGNDETEVIYPEIDSITSVRRGFGVADVGDLNILLKDGSKLEIRSVPNFTEVLKFVQ 265
BLAST of EWM28923.1 vs. NCBI_GenBank
Match: gi|397569682|gb|EJK46898.1| (hypothetical protein THAOC_34412 [Thalassiosira oceanica]) HSP 1 Score: 143.665 bits (361), Expect = 6.207e-39 Identity = 66/120 (55.00%), Postives = 87/120 (72.50%), Query Frame = 0
Query: 102 ESVFFEGAPHWSEVVVPAISILTVIGIIPFASSVARQIWVKYKITSRRISVTSGVGGKDLTEVIYADIERINYVFRAFGTTGDMVLFLRDGAKLEIRSLPNFRDVYNYIRSQLDDDAREQ 221
E F+EG P +E + P ISILTV+GIIP AS+ ARQ WV+Y IT+RRI VTSG+GGKD+ E++Y D+ I V R FG GDMV FLRDGAK E+R++PNF + ++I +D+D E+
Sbjct: 102 EETFYEGPPAITETIAPTISILTVVGIIPAASAWARQAWVRYNITNRRIRVTSGIGGKDMAEIVYPDVVEIRTVKRLFG-DGDMVFFLRDGAKFEMRNVPNFEETMDFILGNVDEDVVEE 220
BLAST of EWM28923.1 vs. NCBI_GenBank
Match: gi|544212878|ref|XP_005536587.1| (hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D] >gi|449017149|dbj|BAM80551.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 140.584 bits (353), Expect = 3.763e-38 Identity = 63/145 (43.45%), Postives = 103/145 (71.03%), Query Frame = 0
Query: 78 KEKREGVDAARRALADKDKMKLEPESVFFEGAPHWSEVVVPAISILTVIGIIPFASSVARQIWVKYKITSRRISVTSGVGGKDLTEVIYADIERINYVFRAFGTTGDMVLFLRDGAKLEIRSLPNFRDVYNYIRSQLDDDAREQT 222
K +++ VD A+ + LEPE F++G P W+E+++P +SILTVIG+IPFA+++ARQ WV+Y+I++R I V +G G+D TEV+Y DIE + YV R G + D V+ L+ GA+LE+R++P+F Y +I ++ ++AR+++
Sbjct: 45 KVRKKSVDEEEEAI--RKPSSLEPEQTFYDGPPSWTELLLPGLSILTVIGVIPFAAALARQYWVRYRISNRSIYVRAGFMGRDETEVVYRDIEEVRYVRRFGGISADYVILLKGGARLELRAVPDFDKTYTFIMQRVSEEARKRS 187
BLAST of EWM28923.1 vs. NCBI_GenBank
Match: gi|1072234902|gb|OEU19631.1| (hypothetical protein FRACYDRAFT_181826, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 134.42 bits (337), Expect = 1.276e-36 Identity = 63/120 (52.50%), Postives = 88/120 (73.33%), Query Frame = 0
Query: 102 ESVFFEGAPHWSEVVVPAISILTVIGIIPFASSVARQIWVKYKITSRRISVTSGVGGKDLTEVIYADIERINYVFRAFGTTGDMVLFLRDGAKLEIRSLPNFRDVYNYIRSQLDDDAREQ 221
E V +EG P +E ++P +SILTV+GIIP A++ +RQ WV+YKITSRRI VTSG+GGKD+ E++Y DI + V R FG GDMV FLRDGAK E+R++P+F +I Q+D + +++
Sbjct: 1 EEVHYEGPPAITETLIPTLSILTVVGIIPAAAAWSRQAWVRYKITSRRIRVTSGIGGKDMAEIVYPDIIEMRSVKRLFG-DGDMVAFLRDGAKFEMRNIPDFEATIKFILEQVDPEVKKE 119 The following BLAST results are available for this feature:
BLAST of EWM28923.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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