EWM30487.1, cds174 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30487.1 vs. NCBI_GenBank
Match: gi|585113151|gb|EWM30487.1| (short-chain dehydrogenase reductase family protein [Nannochloropsis gaditana] >gi|585113152|gb|EWM30488.1| short-chain dehydrogenase reductase family protein [Nannochloropsis gaditana]) HSP 1 Score: 650.973 bits (1678), Expect = 0.000e+0 Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 0
Query: 1 MAFPVLLFVLLFPLVHGFTPRITAVVTGGNRGLGLAISDLLAEVGYHVILTARNAEEGQARVADIQRRHGQNRCEFMALDVSEPKSIKAFVDQMKRNEEMRGGVPHVLINNAGICVRDEDAAAAVEGSGGREGVYRSVFDINTWAPVALMEACLPGMCKHGFGCIVNISSGDGELAYLHSEVAKRLKRVRSLAELKQFSDWVAQMQQEGPWPRGEGLAPVSWPAYSFSKAVLNAATRLLQSRVDALVSKDMKVRAHQPRIVAICPGDVNTAMCDEHAAHDALSPEQAALDVVWAVLHSKECHGGYFYRARRAIPW 315
MAFPVLLFVLLFPLVHGFTPRITAVVTGGNRGLGLAISDLLAEVGYHVILTARNAEEGQARVADIQRRHGQNRCEFMALDVSEPKSIKAFVDQMKRNEEMRGGVPHVLINNAGICVRDEDAAAAVEGSGGREGVYRSVFDINTWAPVALMEACLPGMCKHGFGCIVNISSGDGELAYLHSEVAKRLKRVRSLAELKQFSDWVAQMQQEGPWPRGEGLAPVSWPAYSFSKAVLNAATRLLQSRVDALVSKDMKVRAHQPRIVAICPGDVNTAMCDEHAAHDALSPEQAALDVVWAVLHSKECHGGYFYRARRAIPW
Sbjct: 1 MAFPVLLFVLLFPLVHGFTPRITAVVTGGNRGLGLAISDLLAEVGYHVILTARNAEEGQARVADIQRRHGQNRCEFMALDVSEPKSIKAFVDQMKRNEEMRGGVPHVLINNAGICVRDEDAAAAVEGSGGREGVYRSVFDINTWAPVALMEACLPGMCKHGFGCIVNISSGDGELAYLHSEVAKRLKRVRSLAELKQFSDWVAQMQQEGPWPRGEGLAPVSWPAYSFSKAVLNAATRLLQSRVDALVSKDMKVRAHQPRIVAICPGDVNTAMCDEHAAHDALSPEQAALDVVWAVLHSKECHGGYFYRARRAIPW 315
BLAST of EWM30487.1 vs. NCBI_GenBank
Match: gi|553195799|ref|XP_005856211.1| (short-chain dehydrogenase reductase family protein [Nannochloropsis gaditana CCMP526] >gi|422292859|gb|EKU20161.1| short-chain dehydrogenase reductase family protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 642.114 bits (1655), Expect = 0.000e+0 Identity = 309/315 (98.10%), Postives = 313/315 (99.37%), Query Frame = 0
Query: 1 MAFPVLLFVLLFPLVHGFTPRITAVVTGGNRGLGLAISDLLAEVGYHVILTARNAEEGQARVADIQRRHGQNRCEFMALDVSEPKSIKAFVDQMKRNEEMRGGVPHVLINNAGICVRDEDAAAAVEGSGGREGVYRSVFDINTWAPVALMEACLPGMCKHGFGCIVNISSGDGELAYLHSEVAKRLKRVRSLAELKQFSDWVAQMQQEGPWPRGEGLAPVSWPAYSFSKAVLNAATRLLQSRVDALVSKDMKVRAHQPRIVAICPGDVNTAMCDEHAAHDALSPEQAALDVVWAVLHSKECHGGYFYRARRAIPW 315
M FPVLLFVLLFPL HGFTPRITAVVTGGNRGLGLAISDLLAEVGYHVILTARNAEEGQARVADIQRRHGQNRCEFMALDVSEPKSIKAFVDQMKRNEEMRGGVPHVLINNAGICVRDEDAAAAVEGSGGREGVYRSVFDINTWAPVAL+EACLPGMCKHGFGCIVNISSGDGELAYLHSEVAKRLKRVRSLAELKQFSDWVAQMQQEGPWPRGEGLAPVSWPAYSFSKAVLNAAT+LLQSRVDAL+SKDMKVRAHQPRIVAICPGDVNTAMCDEHAAH+ALSPEQAALDVVWAVLHSKECHGGYFYRARRAIPW
Sbjct: 1 MVFPVLLFVLLFPLFHGFTPRITAVVTGGNRGLGLAISDLLAEVGYHVILTARNAEEGQARVADIQRRHGQNRCEFMALDVSEPKSIKAFVDQMKRNEEMRGGVPHVLINNAGICVRDEDAAAAVEGSGGREGVYRSVFDINTWAPVALIEACLPGMCKHGFGCIVNISSGDGELAYLHSEVAKRLKRVRSLAELKQFSDWVAQMQQEGPWPRGEGLAPVSWPAYSFSKAVLNAATQLLQSRVDALISKDMKVRAHQPRIVAICPGDVNTAMCDEHAAHNALSPEQAALDVVWAVLHSKECHGGYFYRARRAIPW 315
BLAST of EWM30487.1 vs. NCBI_GenBank
Match: gi|836723342|ref|WP_047855406.1| (short-chain dehydrogenase [Archangium gephyra] >gi|827420731|gb|AKJ00627.1| Short-chain dehydrogenase/reductase SDR [Archangium gephyra]) HSP 1 Score: 120.553 bits (301), Expect = 1.007e-28 Identity = 104/300 (34.67%), Postives = 142/300 (47.33%), Query Frame = 0
Query: 23 TAVVTGGNRGLGLAISDLLAEVGYHVILTARNAEEGQARVADIQRRHGQN-RCEFMALDVSEPKSIKAFVDQMKRNEEMRGGVPHVLINNAGICVRDEDAAAAVEGSGGREGVYRSVFDINTWAPVALMEACLPGMCKHGFGCIVNISSGDGELAYLHSEVAKRLK----RVRSLAELKQFSDWV--AQMQQEGPWPRGEGLAPVSWPAYSFSKAVLNAATRLLQSRVDALVSKDMKVRAHQPRIVAICPGDVNTAMCDEHAAHDALSPEQAALDVVWAVLHSKECHGGYFYRARRAIPW 315
TA+VTGGNRGLGL + L +G V+LTAR+ EG A + H + F LDV+ +S+ VD+++R +G L+NNAG+ + DA V +N P+ L E LP + +HG IV +SSG GEL L + +R + +A L+ F + V Q Q+G WP AY SK LNA TRLL ++++K R + A+CPG V T M HA E+ A +VWA E G F+R RRAIPW
Sbjct: 7 TALVTGGNRGLGLEVCRQLGRLGMRVLLTARDIAEGAKATASL---HAEGLDVVFEPLDVTSAESLDKLVDRLER----QGTRLAALVNNAGLAMEGFDA-----------NVAERTVAVNFLGPLHLTERLLPLLEEHGR--IVMVSSGVGELEGLSPALRQRFDPPPPKEELVALLQTFVEDVRSGQYAQKG-WPGS---------AYRVSKVGLNALTRLL--------AEELKPR--HLLVNAVCPGWVKTRMGGSHAPRGV---EEGADTIVWAATLPPEGPSGGFFRNRRAIPW 263
BLAST of EWM30487.1 vs. NCBI_GenBank
Match: gi|551645183|ref|XP_005825381.1| (hypothetical protein GUITHDRAFT_115540 [Guillardia theta CCMP2712] >gi|428169467|gb|EKX38401.1| hypothetical protein GUITHDRAFT_115540 [Guillardia theta CCMP2712]) HSP 1 Score: 117.472 bits (293), Expect = 1.071e-28 Identity = 69/153 (45.10%), Postives = 89/153 (58.17%), Query Frame = 0
Query: 163 GCIVNISSGDGELAYLHSEVAKRLKRVRSLAELKQFSDWVAQMQQEGPWPRGEGLAPVSWPAYSFSKAVLNAATRLLQSRVDALVSKDMKVRAHQPRIVAICPGDVNTAMCDEHAAHDALSPEQAALDVVWAVLHSKECHGGYFYRARRAIPW 315
G I+NISSGDGELA L+SE+ + LK V+S ++L+ + EG RG+ LA PAYS SKA LN TR+ ++ +K+RA VA+CPGDV+T MC L+P QAA DV+WA+ EC G FYR R IPW
Sbjct: 23 GIIINISSGDGELACLNSELQRLLKEVQSESDLESL----LRELWEGTCLRGQELAFGPTPAYSVSKAALNVLTRIQAREIEM---SQLKLRA-----VAVCPGDVDTRMCSAGEGDRVLTPAQAAGDVIWAIERPSECPSGGFYREREPIPW 163
BLAST of EWM30487.1 vs. NCBI_GenBank
Match: gi|727475681|ref|XP_010413652.1| (PREDICTED: salutaridine reductase-like isoform X2 [Camelina sativa]) HSP 1 Score: 120.168 bits (300), Expect = 2.174e-28 Identity = 97/289 (33.56%), Postives = 136/289 (47.06%), Query Frame = 0
Query: 23 TAVVTGGNRGLGLAISDLLAEVGYHVILTARNAEEGQARVADIQRRHGQNRCEFMALDVSEPKSIKAFVDQMKRNEEMRGGVPHVLINNAGICVRDEDAAAAVEGSGGREGVYRSVFDINTWAPVALMEACLPGMCK-HGFGCIVNISSGDGELAYLHSEVAKRLKRVRSLAELKQFSDWVAQMQQE---GPWPRGEGLAPVSWPAYSFSKAVLNAATRLLQSRVDALVSKDMKVRAHQPRIVAICPGDVNTAMCDEHAAHDALSPEQAALDVVWAVLHSKECHGGYFY 307
TAVVTG N+G+G A+ L E+G V+LT+RN G ++ D RR G F +LD+S+P SI AFV +RN GV +L+NNAG+ A E S + ++ N + L EA LP + I+NISS G L L S + +R L + +Q V Q ++ G W + +G P +WP Y+ SK LNA +R+L R D K + V CPG T+M H A E AA+ +L ++ G FY
Sbjct: 8 TAVVTGANKGIGFAVVKRLLELGLTVVLTSRNTVNG-SQATDSLRRIGFQNVHFCSLDISDPSSIAAFVSWFRRNL----GVLDILVNNAGVSFN-----AVGENSIKQP---ETIIKTNFYGAKLLTEALLPLFRRSESVSRILNISSRLGTLNKLRSPIIRRTLESEDLTD-EQIDATVTQFLEDVMSGTWEK-QGW-PENWPGYAISKMALNAYSRVLARRYDG---KRLSVN-------CFCPGFTRTSMTGGQGTHTA--DEAAAIVAKLVLLPREKLSSGKFY 268
BLAST of EWM30487.1 vs. NCBI_GenBank
Match: gi|727475679|ref|XP_010413651.1| (PREDICTED: salutaridine reductase-like isoform X1 [Camelina sativa]) HSP 1 Score: 119.783 bits (299), Expect = 3.357e-28 Identity = 99/301 (32.89%), Postives = 140/301 (46.51%), Query Frame = 0
Query: 11 LFPLVHGFTPRITAVVTGGNRGLGLAISDLLAEVGYHVILTARNAEEGQARVADIQRRHGQNRCEFMALDVSEPKSIKAFVDQMKRNEEMRGGVPHVLINNAGICVRDEDAAAAVEGSGGREGVYRSVFDINTWAPVALMEACLPGMCK-HGFGCIVNISSGDGELAYLHSEVAKRLKRVRSLAELKQFSDWVAQMQQE---GPWPRGEGLAPVSWPAYSFSKAVLNAATRLLQSRVDALVSKDMKVRAHQPRIVAICPGDVNTAMCDEHAAHDALSPEQAALDVVWAVLHSKECHGGYFY 307
L P ++ TAVVTG N+G+G A+ L E+G V+LT+RN G ++ D RR G F +LD+S+P SI AFV +RN GV +L+NNAG+ A E S + ++ N + L EA LP + I+NISS G L L S + +R L + +Q V Q ++ G W + +G P +WP Y+ SK LNA +R+L R D K + V CPG T+M H A E AA+ +L ++ G FY
Sbjct: 8 LSPTNKWWSEGTTAVVTGANKGIGFAVVKRLLELGLTVVLTSRNTVNG-SQATDSLRRIGFQNVHFCSLDISDPSSIAAFVSWFRRNL----GVLDILVNNAGVSFN-----AVGENSIKQP---ETIIKTNFYGAKLLTEALLPLFRRSESVSRILNISSRLGTLNKLRSPIIRRTLESEDLTD-EQIDATVTQFLEDVMSGTWEK-QGW-PENWPGYAISKMALNAYSRVLARRYDG---KRLSVN-------CFCPGFTRTSMTGGQGTHTA--DEAAAIVAKLVLLPREKLSSGKFY 280
BLAST of EWM30487.1 vs. NCBI_GenBank
Match: gi|727460881|ref|XP_010512245.1| (PREDICTED: salutaridine reductase-like [Camelina sativa]) HSP 1 Score: 119.783 bits (299), Expect = 3.884e-28 Identity = 98/289 (33.91%), Postives = 136/289 (47.06%), Query Frame = 0
Query: 23 TAVVTGGNRGLGLAISDLLAEVGYHVILTARNAEEGQARVADIQRRHGQNRCEFMALDVSEPKSIKAFVDQMKRNEEMRGGVPHVLINNAGICVRDEDAAAAVEGSGGREGVYRSVFDINTWAPVALMEACLPGMCK-HGFGCIVNISSGDGELAYLHSEVAKRLKRVRSLAELKQFSDWVAQMQQE---GPWPRGEGLAPVSWPAYSFSKAVLNAATRLLQSRVDALVSKDMKVRAHQPRIVAICPGDVNTAMCDEHAAHDALSPEQAALDVVWAVLHSKECHGGYFY 307
TAVVTG N+G+G A+ L E+G V+LTARN G ++ D RR G F +LD+S+P SI AFV +RN GV +L+NNAG+ A E S + ++ + N + L EA LP + I+NISS G L L S +R L + +Q V Q ++ G W + +G P +WP Y+ SK LNA +R+L R D K + V CPG T+M H A E AA+ +L ++ G FY
Sbjct: 21 TAVVTGANKGIGFAVVKRLLELGLTVVLTARNTVNG-SQATDSLRRIGFQNVHFCSLDISDPSSIAAFVSWFRRNL----GVLDILVNNAGVSFN-----AVGENSIKQP---ETIINTNFYGAKLLTEALLPLFRRSESVSRILNISSRLGTLNKLRSPSLRRTLESEDLTD-EQIDATVTQFLEDVMNGTWEK-QGW-PENWPGYAISKMALNAYSRVLARRYDG---KRLSVN-------CFCPGFTRTSMTGGQGTHTA--DEAAAIVAKLVLLPPEKLSSGKFY 281
BLAST of EWM30487.1 vs. NCBI_GenBank
Match: gi|921301539|ref|WP_053236747.1| (SDR family oxidoreductase [Sandaracinus amylolyticus] >gi|816960216|gb|AKF09722.1| putative oxidoreductase [Sandaracinus amylolyticus]) HSP 1 Score: 117.857 bits (294), Expect = 9.135e-28 Identity = 102/299 (34.11%), Postives = 146/299 (48.83%), Query Frame = 0
Query: 23 TAVVTGGNRGLGLAISDLLAEVGYHVILTARNAEEGQARVADIQRRHGQNRCEFMALDVSEPKSIKAFVDQMKRNEEMRGGVP-HVLINNAGICVRDEDAAAAVEGSGGREGVYRSVFDINTWAPVALMEACLPGMCKHGFGCIVNISSGDGELAYLHSEVAKRL----KRVRSLAELKQFSDWV-AQMQQEGPWPRGEGLAPVSWPAYSFSKAVLNAATRLLQSRVDALVSKDMKVRAHQPRIVAICPGDVNTAMCDEHAAHDALSPEQAALDVVWAVLHSKECHGGYFYRARRAIPW 315
TA+VTGGNRG+GL + LAE G+ V+L AR+ +EG+A + R G + LDVS+ +SI A V ++ G P V++NNAG + D VE V R +N +A+ +A P + + +V +SSG GEL L S + R R LA + +F+ V A ++E WPR AY SK LNA TR+ ++ ++ RA R+VA+CPG V T + A+ SP + A +VWA + + G FYR R IPW
Sbjct: 4 TALVTGGNRGIGLEVCRGLAEPGFRVLLAARDRDEGEAAARSL--REGGHDVRACVLDVSDRESIAALVSSLE------GQAPIDVVVNNAGTSLDGFD----VE-------VVRRTLAVNLERAIAVTDALAPQLSEDAR--VVMVSSGMGELHGLPSAIRARFDPPRDRAHVLAAVDEFARAVRAGREREEGWPRS---------AYRISKVALNAMTRVY--------AETLRGRA---RVVAVCPGWVRTRVGGAGASR---SPREGAAGIVWAAT-TPDLETGRFYRDGRTIPW 257
BLAST of EWM30487.1 vs. NCBI_GenBank
Match: gi|1121249453|ref|WP_073566983.1| (short-chain dehydrogenase [Archangium sp. Cb G35] >gi|1113023728|gb|OJT17892.1| 3-oxoacyl-ACP reductase [Archangium sp. Cb G35]) HSP 1 Score: 117.087 bits (292), Expect = 2.065e-27 Identity = 102/296 (34.46%), Postives = 143/296 (48.31%), Query Frame = 0
Query: 23 TAVVTGGNRGLGLAISDLLAEVGYHVILTARNAEEGQARVADIQRRHGQN-RCEFMALDVSEPKSIKAFVDQMKRNEEMRGGVPHVLINNAGICVRDEDAAAAVEGSGGREGVYRSVFDINTWAPVALMEACLPGMCKHGFGCIVNISSGDGELAYLHSEVAKRLKRVRSLAELKQFSDWVAQMQQEGPWPRGEGLAPVSWP--AYSFSKAVLNAATRLLQSRVDALVSKDMKVRAHQPRIVAICPGDVNTAMCDEHAAHDALSPEQAALDVVWAVLHSKECHGGYFYRARRAIPW 315
TA+VTGGNRG+GL + L +G V+LTAR+ EG A + H + F L+VS P+S+ VD+++R +G L+NNAGI + DA A R+V +N P+ + E LP + +H IV +SSG GEL L + +R AEL V+ +Q RG WP AY SK +NA TRLL ++++K R + A+CPG V T M EHA E+ A +VWA + G F+R RR++PW
Sbjct: 7 TALVTGGNRGIGLEVCRQLGRLGMRVLLTARDIAEGAKATAAL---HAEGLDVVFEPLNVSSPESLDKLVDRLER----QGTRLAALVNNAGIAMEGFDANVA----------ERTV-AVNFLGPLHVTERLLPLLEEHAR--IVMVSSGVGELEGLSPALRQRFDPPPPKAEL------VSLVQSFVEDVRGGQYVQKGWPGSAYRVSKVGVNALTRLL--------AEELKPR--HLLVNAVCPGWVKTRMGGEHAPKGV---EEGADTIVWAATLPPDGPSGGFFRNRRSVPW 263
BLAST of EWM30487.1 vs. NCBI_GenBank
Match: gi|727592469|ref|XP_010469284.1| (PREDICTED: salutaridine reductase [Camelina sativa]) HSP 1 Score: 117.857 bits (294), Expect = 2.180e-27 Identity = 97/289 (33.56%), Postives = 134/289 (46.37%), Query Frame = 0
Query: 23 TAVVTGGNRGLGLAISDLLAEVGYHVILTARNAEEGQARVADIQRRHGQNRCEFMALDVSEPKSIKAFVDQMKRNEEMRGGVPHVLINNAGICVRDEDAAAAVEGSGGREGVYRSVFDINTWAPVALMEACLPGMCK-HGFGCIVNISSGDGELAYLHSEVAKRLKRVRSLAELKQFSDWVAQMQQE---GPWPRGEGLAPVSWPAYSFSKAVLNAATRLLQSRVDALVSKDMKVRAHQPRIVAICPGDVNTAMCDEHAAHDALSPEQAALDVVWAVLHSKECHGGYFY 307
TAVVTG N+G+G A+ L ++G V+LTARN G ++ D RR G F +LD+S+P SI AFV RN GV +L+NNAG+ A E S + ++ N + L EA LP + I+NISS G L L S + +R L + +Q V Q ++ G W + +G P WP Y+ SK LNA +R+L R D K + V CPG T+M H A E AA+ +L ++ G FY
Sbjct: 20 TAVVTGANKGIGFAVVKRLLQLGLTVVLTARNTVNG-SQATDSLRRIGFQNVHFCSLDISDPSSIAAFVSWFHRNL----GVLDILVNNAGVSFN-----AVGENSIKQP---ETIIKTNFYGAKLLSEALLPLFRRSESVSRILNISSRLGTLNKLRSPIIRRTLESEDLTD-EQIDATVTQFLEDVMSGTWEK-QGW-PEKWPGYAISKMALNAYSRVLARRYDG---KRLSVN-------CFCPGFTRTSMTGGQGTHTA--DEAAAIVAKLVLLTPEKLSSGKFY 280 The following BLAST results are available for this feature:
BLAST of EWM30487.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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