EWM28944.1, cds1729 (CDS) Nannochloropsis gaditana

Overview
NameEWM28944.1
Unique Namecds1729
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:1366792..1367346 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28944.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100943g1.2834.mrna
GbkeyCDS
End range.
End range1367346
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:1366792..1367346 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM28944.1 vs. NCBI_GenBank
Match: gi|585111415|gb|EWM28944.1| (hypothetical protein Naga_100943g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 363.229 bits (931), Expect = 6.869e-127
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0 
Query:    1 PPRSPSKLPPSSLSPSSSPRATGKVAASCPPGIESISAANIPPPKERQDIVEQRWNGRHEKYQRKKRPGTLSAASLNVSASALGDTIALLQDLSISQTIEGTGTGERDRRGACEPQRLEGGEGRVEWEALPTPTSFPLPVLSPCPASPPIEMLEGKEGRGNEKGEAQRVIVGGSERDDRVSHEP 184
            PPRSPSKLPPSSLSPSSSPRATGKVAASCPPGIESISAANIPPPKERQDIVEQRWNGRHEKYQRKKRPGTLSAASLNVSASALGDTIALLQDLSISQTIEGTGTGERDRRGACEPQRLEGGEGRVEWEALPTPTSFPLPVLSPCPASPPIEMLEGKEGRGNEKGEAQRVIVGGSERDDRVSHEP
Sbjct:    1 PPRSPSKLPPSSLSPSSSPRATGKVAASCPPGIESISAANIPPPKERQDIVEQRWNGRHEKYQRKKRPGTLSAASLNVSASALGDTIALLQDLSISQTIEGTGTGERDRRGACEPQRLEGGEGRVEWEALPTPTSFPLPVLSPCPASPPIEMLEGKEGRGNEKGEAQRVIVGGSERDDRVSHEP 184
The following BLAST results are available for this feature:
BLAST of EWM28944.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585111415|gb|EWM28944.1|6.869e-127100.00hypothetical protein Naga_100943g1, partial [Nanno... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1733rna1733Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications