EWM28945.1, cds1728 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28945.1 vs. NCBI_GenBank
Match: gi|585111416|gb|EWM28945.1| (mitochondrial carrier [Nannochloropsis gaditana]) HSP 1 Score: 853.203 bits (2203), Expect = 0.000e+0 Identity = 425/425 (100.00%), Postives = 425/425 (100.00%), Query Frame = 0 Query: 1 MLTLTLSHDTPLIYSLSSNPPRAMLVSRILLPVITLACSAAAMSSKRHVLMVPPCSTLRSACRLPLATASTTDLFGAVSHKQPCRQGVGRRRIDTISSGRQRIEEPRDAFLAALRARGGGGGGAAASGLSNAGWATVVEGLKNGCASGMAAACAKLLLQPFDTVKTLQQANKGSLGMLEAAQDLVSRKGVSALYTGLGVTLVGSIPAVSVYFGVYQAVKKALLQALPPGLGWSLLGVAASAGVGNTVASIFRVPYEVVKQRLQAGMYVSTGQALRTMYRTEGGLLAFFGTSGVASQILRDVPYAIVTLLTYESMRRTRAERRLGPGESKGGLTKGSTALEDSVMGALAGGVGSLVSNPMDVVKTRVMTQPGLYPTVWSAVSKVWVEEGPSAFFKGTVPRLLHKVPANAIFFATYEIFRGLLRVQG 425 MLTLTLSHDTPLIYSLSSNPPRAMLVSRILLPVITLACSAAAMSSKRHVLMVPPCSTLRSACRLPLATASTTDLFGAVSHKQPCRQGVGRRRIDTISSGRQRIEEPRDAFLAALRARGGGGGGAAASGLSNAGWATVVEGLKNGCASGMAAACAKLLLQPFDTVKTLQQANKGSLGMLEAAQDLVSRKGVSALYTGLGVTLVGSIPAVSVYFGVYQAVKKALLQALPPGLGWSLLGVAASAGVGNTVASIFRVPYEVVKQRLQAGMYVSTGQALRTMYRTEGGLLAFFGTSGVASQILRDVPYAIVTLLTYESMRRTRAERRLGPGESKGGLTKGSTALEDSVMGALAGGVGSLVSNPMDVVKTRVMTQPGLYPTVWSAVSKVWVEEGPSAFFKGTVPRLLHKVPANAIFFATYEIFRGLLRVQG Sbjct: 1 MLTLTLSHDTPLIYSLSSNPPRAMLVSRILLPVITLACSAAAMSSKRHVLMVPPCSTLRSACRLPLATASTTDLFGAVSHKQPCRQGVGRRRIDTISSGRQRIEEPRDAFLAALRARGGGGGGAAASGLSNAGWATVVEGLKNGCASGMAAACAKLLLQPFDTVKTLQQANKGSLGMLEAAQDLVSRKGVSALYTGLGVTLVGSIPAVSVYFGVYQAVKKALLQALPPGLGWSLLGVAASAGVGNTVASIFRVPYEVVKQRLQAGMYVSTGQALRTMYRTEGGLLAFFGTSGVASQILRDVPYAIVTLLTYESMRRTRAERRLGPGESKGGLTKGSTALEDSVMGALAGGVGSLVSNPMDVVKTRVMTQPGLYPTVWSAVSKVWVEEGPSAFFKGTVPRLLHKVPANAIFFATYEIFRGLLRVQG 425
BLAST of EWM28945.1 vs. NCBI_GenBank
Match: gi|553192462|ref|XP_005855576.1| (mitochondrial carrier [Nannochloropsis gaditana CCMP526] >gi|422293491|gb|EKU20791.1| mitochondrial carrier [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 770.385 bits (1988), Expect = 0.000e+0 Identity = 383/383 (100.00%), Postives = 383/383 (100.00%), Query Frame = 0 Query: 43 MSSKRHVLMVPPCSTLRSACRLPLATASTTDLFGAVSHKQPCRQGVGRRRIDTISSGRQRIEEPRDAFLAALRARGGGGGGAAASGLSNAGWATVVEGLKNGCASGMAAACAKLLLQPFDTVKTLQQANKGSLGMLEAAQDLVSRKGVSALYTGLGVTLVGSIPAVSVYFGVYQAVKKALLQALPPGLGWSLLGVAASAGVGNTVASIFRVPYEVVKQRLQAGMYVSTGQALRTMYRTEGGLLAFFGTSGVASQILRDVPYAIVTLLTYESMRRTRAERRLGPGESKGGLTKGSTALEDSVMGALAGGVGSLVSNPMDVVKTRVMTQPGLYPTVWSAVSKVWVEEGPSAFFKGTVPRLLHKVPANAIFFATYEIFRGLLRVQG 425 MSSKRHVLMVPPCSTLRSACRLPLATASTTDLFGAVSHKQPCRQGVGRRRIDTISSGRQRIEEPRDAFLAALRARGGGGGGAAASGLSNAGWATVVEGLKNGCASGMAAACAKLLLQPFDTVKTLQQANKGSLGMLEAAQDLVSRKGVSALYTGLGVTLVGSIPAVSVYFGVYQAVKKALLQALPPGLGWSLLGVAASAGVGNTVASIFRVPYEVVKQRLQAGMYVSTGQALRTMYRTEGGLLAFFGTSGVASQILRDVPYAIVTLLTYESMRRTRAERRLGPGESKGGLTKGSTALEDSVMGALAGGVGSLVSNPMDVVKTRVMTQPGLYPTVWSAVSKVWVEEGPSAFFKGTVPRLLHKVPANAIFFATYEIFRGLLRVQG Sbjct: 1 MSSKRHVLMVPPCSTLRSACRLPLATASTTDLFGAVSHKQPCRQGVGRRRIDTISSGRQRIEEPRDAFLAALRARGGGGGGAAASGLSNAGWATVVEGLKNGCASGMAAACAKLLLQPFDTVKTLQQANKGSLGMLEAAQDLVSRKGVSALYTGLGVTLVGSIPAVSVYFGVYQAVKKALLQALPPGLGWSLLGVAASAGVGNTVASIFRVPYEVVKQRLQAGMYVSTGQALRTMYRTEGGLLAFFGTSGVASQILRDVPYAIVTLLTYESMRRTRAERRLGPGESKGGLTKGSTALEDSVMGALAGGVGSLVSNPMDVVKTRVMTQPGLYPTVWSAVSKVWVEEGPSAFFKGTVPRLLHKVPANAIFFATYEIFRGLLRVQG 383
BLAST of EWM28945.1 vs. NCBI_GenBank
Match: gi|298706075|emb|CBJ29185.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 288.886 bits (738), Expect = 1.979e-89 Identity = 160/288 (55.56%), Postives = 203/288 (70.49%), Query Frame = 0 Query: 138 VEGLKNGCASGMAAACAKLLLQPFDTVKTLQQANKGSLGMLEAAQDLVSRKGVSALYTGLGVTLVGSIPAVSVYFGVYQAVKKAL--LQALPPGLGWSLLGVAASAGVGNTVASIFRVPYEVVKQRLQAGMYVSTGQALRTMYRTEGGLLAFFGTSGVASQILRDVPYAIVTLLTYESMRRTRAERRLGPGESKGGLTKGSTALEDSVMGALAGGVGSLVSNPMDVVKTRVMTQPGLYPTVWSAVSKVWVEEGPSAFFKGTVPRLLHKVPANAIFFATYEIFRGLLRV 423 VEGLKNG ASG+AAAC K +LQPFDT+KT+QQ + + +L+A +DL++R GV LY GLGVTLVGS+PAV VYFG+YQ VK + Q + P L + SAGVGN +AS FRVPYEVVKQRLQ G Y +T A++++Y EGGLL FFG G+ Q RD+PYA+VTLL YE++++ A R+ PG K G + +E+ V+GA+AGG+GSLV+NPMD++KTR+MT P LY A K +EGP AF KG PRLLHK+PANA FF YE FR +L V Sbjct: 207 VEGLKNGLASGLAAACVKTVLQPFDTMKTVQQFSTTRMTLLQAGRDLLARGGVPELYQGLGVTLVGSMPAVGVYFGLYQFVKNQMDAKQGISP-----YLSITVSAGVGNFIASFFRVPYEVVKQRLQVGQYPTTMVAIQSIY-NEGGLLGFFGKGGLKMQWARDIPYAMVTLLVYETLQKAAARRKGPPGTKKKGAK--ANPIENMVIGAIAGGMGSLVTNPMDMIKTRMMTSPELYAGPMDAAWKALSKEGPQAFLKGATPRLLHKIPANAFFFVAYEFFRSILGV 486
BLAST of EWM28945.1 vs. NCBI_GenBank
Match: gi|1210520220|dbj|GAX21103.1| (hypothetical protein FisN_1Lh221 [Fistulifera solaris]) HSP 1 Score: 239.965 bits (611), Expect = 1.329e-72 Identity = 134/293 (45.73%), Postives = 185/293 (63.14%), Query Frame = 0 Query: 138 VEGLKNGCASGMAAACAKLLLQPFDTVKTLQQANK----GSLGMLEAAQDLVSRKG-VSALYTGLGVTLVGSIPAVSVYFGVYQAVKKALLQALPPGLGWSLLGVAASAGVGNTVASIFRVPYEVVKQRLQAGMYVSTGQALRTMYRTEGGLLAFFGTSGVASQILRDVPYAIVTLLTYESMRRTRAERRLGPGESKGGLTKGSTALEDSVMGALAGGVGSLVSNPMDVVKTRVMTQPGLY-PTVWSAVSKVWVEEGPSAFFKGTVPRLLHKVPANAIFFATYEIFRGLLRVQ 424 V+GLKNG AS +AA C K LQP D +KT+QQ + SL + EA ++++SR G Y GLGVT++G++P+V++YFGVY KK LL + G VA SA +GN+VAS RVPYEV+KQ+LQ G+Y ST QAL+ + ++ + F G+A Q+LRDVPYA++TL+ YE+++ T + R S + D +G AGG GS +NP DV+KTR+ T LY +V + +++W E G AF +G+VPRL+HKVPANA FF YE FR LL V+ Sbjct: 34 VDGLKNGLASALAAGCVKTSLQPIDAIKTIQQYQQSKGTASLTIWEACREIMSRPGGFWNFYAGLGVTVIGAMPSVALYFGVYSYCKKTLLNS-HWGKKHPTASVALSAAIGNSVASFSRVPYEVLKQQLQTGVYTSTWQALKEISSSKEYMSLLFPKGGIAIQMLRDVPYAVITLMLYETLQNTFHKSR-------------SNKVIDFCVGGAAGGFGSWATNPTDVIKTRLQTNSELYGGSVRTCTAEIWREGGIMAFLRGSVPRLVHKVPANAFFFLFYEGFRQLLGVR 312
BLAST of EWM28945.1 vs. NCBI_GenBank
Match: gi|1210529144|dbj|GAX12290.1| (hypothetical protein FisN_1Hh221 [Fistulifera solaris]) HSP 1 Score: 239.195 bits (609), Expect = 2.481e-72 Identity = 134/293 (45.73%), Postives = 183/293 (62.46%), Query Frame = 0 Query: 138 VEGLKNGCASGMAAACAKLLLQPFDTVKTLQQANKG----SLGMLEAAQDLVSRKG-VSALYTGLGVTLVGSIPAVSVYFGVYQAVKKALLQALPPGLGWSLLGVAASAGVGNTVASIFRVPYEVVKQRLQAGMYVSTGQALRTMYRTEGGLLAFFGTSGVASQILRDVPYAIVTLLTYESMRRTRAERRLGPGESKGGLTKGSTALEDSVMGALAGGVGSLVSNPMDVVKTRVMTQPGLY-PTVWSAVSKVWVEEGPSAFFKGTVPRLLHKVPANAIFFATYEIFRGLLRVQ 424 V+GLKNG AS +AA C K LQP D +KT+QQ + SL + EA ++++SR G Y GLGVT+ G++P+V++YFGVY KK LL + G VA SA +GN+VAS RVPYEV+KQ+LQ G+Y ST QA + + ++ + F G+A Q+LRDVPYA++TL+ YE+++ T + R S L D +G AGG GS +NP DV+KTR+ T LY +V + +++W E G AF +G+VPRL+HKVPANA FF YE FR LL V+ Sbjct: 34 VDGLKNGLASALAAGCVKTSLQPIDAIKTIQQYQQAKGTASLTIWEACREIMSRPGGFWNFYAGLGVTVFGAMPSVALYFGVYSYCKKTLLNS-RWGKKHPTASVALSAAIGNSVASFSRVPYEVLKQQLQTGVYTSTWQAFKEISSSKEYMSLLFPKGGIAIQMLRDVPYAVITLMLYETLQNTFHKSR-------------SNKLIDFCVGGAAGGFGSWATNPTDVIKTRLQTNSELYGGSVRTCTAEIWREGGAMAFLRGSVPRLVHKVPANAFFFVFYEGFRQLLGVR 312
BLAST of EWM28945.1 vs. NCBI_GenBank
Match: gi|397569657|gb|EJK46885.1| (hypothetical protein THAOC_34433 [Thalassiosira oceanica]) HSP 1 Score: 225.328 bits (573), Expect = 2.563e-67 Identity = 135/296 (45.61%), Postives = 182/296 (61.49%), Query Frame = 0 Query: 150 AAACAKLLLQPFDTVKTLQQANKG-SLGMLEAAQDLVSRKGVSALYTGLGVTLVGSIPAVSVYFGVYQAVKKALLQALPPGLG---------------WSLLGVAASAGVGNTVASIFRVPYEVVKQRLQAGMYVSTGQALRTMYRTEGGLLAFFGTSGVASQILRDVPYAIVTLLTYESMRRTRAERRLGPGESKGGLTKGSTALEDSVMGALAGGVGSLVSNPMDVVKTRVMTQP-----GLYPTVWSAVSKVWVEEGPSAFFKGTVPRLLHKVPANAIFFATYEIFRGLLRVQ 424 ++AC+K +L P DT+KT+QQ +G SLG+ EA + +V R GV LY GL V+ +GS+P+V +YFGVY K+ + A LG + +A SA +GNTVAS RVPYEVVKQ LQ G Y ST A+++M+ E GL AFF G++ Q+ RD+PYAI TLL+YE +R A +R + G + D V G +GG+GS ++NPMDVVKTR+ T P ++ + + VW E GPSAF +G+VPRLLHKVPAN+ FF YE F+ LLRV+ Sbjct: 5 SSACSKTILAPLDTIKTVQQHVEGKSLGLFEAGRIVVGRGGVGELYAGLAVSALGSMPSVGLYFGVYSYCKRTVGSAFTRCLGSQRQDGKRPLCSDESLRTISIACSAAIGNTVASFSRVPYEVVKQNLQTGKYSSTVTAMQSMW-NESGLRAFFPLGGISVQMARDIPYAIFTLLSYEFLREKWALKR-SQQDPNGRWWR------DMVAGGASGGLGSYLTNPMDVVKTRIQTPPVGDSTACSGSIMACANAVWEEGGPSAFLRGSVPRLLHKVPANSCFFLFYEFFKRLLRVE 292
BLAST of EWM28945.1 vs. NCBI_GenBank
Match: gi|551674442|ref|XP_005839976.1| (hypothetical protein GUITHDRAFT_101444 [Guillardia theta CCMP2712] >gi|428184140|gb|EKX52996.1| hypothetical protein GUITHDRAFT_101444 [Guillardia theta CCMP2712]) HSP 1 Score: 223.402 bits (568), Expect = 6.112e-66 Identity = 128/311 (41.16%), Postives = 184/311 (59.16%), Query Frame = 0 Query: 122 GGAAASGLSNAGWATVVEGLKNGCASGMAAACAKLLLQPFDTVKTLQQANKGSLGMLEAAQDLVSRKGVSALYT-GLGVTLVGSIPAVSVYFGVYQAVKKALLQALPPGLGWSLLGVAASAGVGNTVASIFRVPYEVVKQRLQAGMYVSTGQALRTMYRTEGGLLAFFGTSGVASQILRDVPYAIVTLLTYE---SMRRT---RAERRLGPGESKGGLTKGSTA-LEDSVMGALAGGVGSLVSNPMDVVKTRVMTQPGLYPTVWSAVSKVWVEEGPSAFFKGTVPRLLHKVPANAIFFATYEIFRGLLRVQ 424 G ++ + +A + +EGLKN ASG+A+A K G+ EA + +V G +L+T GL VTL+GS+P+ +VYFGVYQ +K+ Q L GL + L VA SA N +A+ FRVP E+VKQR+QAGMY AL+ ++ +GG LAFF V Q+ RD+PYA+V LLTYE S+ RT E + G G+ K +TA ++ +GA AG +G+LV+ P+DVVKTR + Y + + + W+ EGP+AFFKG VPR+ K+P+++IFF YE+FR + V+ Sbjct: 51 NGLESNTVGDANTSPFIEGLKNSLASGLASAAGK--------------------GVWEAGRRVVKESGFCSLFTRGLDVTLIGSVPSTAVYFGVYQFLKRKFTQQL--GLEYKLTAVALSASTANFIAAFFRVPTEIVKQRVQAGMYPDATSALKLIF-ADGGFLAFFELRSVMVQVFRDIPYAVVMLLTYEILHSLFRTNVFETEAKQGRGDDSNLAAKTATASVKGLWIGATAGALGALVTTPLDVVKTRWLVDRKQYRGLVDVIVRTWLHEGPAAFFKGAVPRVAQKIPSSSIFFLLYELFRTIFGVK 338
BLAST of EWM28945.1 vs. NCBI_GenBank
Match: gi|224009267|ref|XP_002293592.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220970992|gb|EED89328.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 211.846 bits (538), Expect = 9.448e-62 Identity = 125/279 (44.80%), Postives = 171/279 (61.29%), Query Frame = 0 Query: 137 VVEGLKNGCASGMAAACAKLLLQPFDTVKTLQQANKG--SLGMLEAAQDLVSRK-GVSALYTGLGVTLVGSIPAVSVYFGVYQAVKKALLQALPPGLGWSLLGVAASAGVGNTVASIFRVPYEVVKQRLQAGMYVSTGQALRTMYRTEGGLLAFFGTSGVASQILRDVPYAIVTLLTYESMRRTRAERRLGPGESKGGLTKGSTALEDSVMGALAGGVGSLVSNPMDVVKTRVMTQP----GLYPTVWSAVSKVWVEE-GPSAFFKGTVPRLLHKVPAN 407 ++EGLKN ASG+AAAC+K LL PFDT+KT+QQ KG SL ++EAA+ +++R G+ LY GLGV+++G++P+V +YFGVY K+ NTVAS RVPYEVVKQ LQ G Y ST AL TM+ +GG+ +FF V+ Q++RD+PYA+ TLL+YE ++ + K + L D + GA AGG+GS ++NP DV+KTR+ T LY S + +EE G +AF +G+VPRLLHKVPAN Sbjct: 58 IIEGLKNTLASGLAAACSKTLLAPFDTIKTVQQDVKGGTSLKLMEAARKVMARPGGIFNLYAGLGVSVLGAMPSVGLYFGVYSYCKR------------------------NTVASFSRVPYEVVKQSLQTGQYPSTADALSTMW-MQGGMRSFFPLGSVSIQMVRDIPYAVFTLLSYEYIKENWVLK-------KSVDDPNNRWLRDMIAGATAGGIGSYLTNPFDVIKTRLQTTDIAGAALYGGSISKCAMSVLEEGGAAAFLRGSVPRLLHKVPAN 304
BLAST of EWM28945.1 vs. NCBI_GenBank
Match: gi|219126910|ref|XP_002183690.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217404927|gb|EEC44872.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 198.364 bits (503), Expect = 6.291e-58 Identity = 112/228 (49.12%), Postives = 145/228 (63.60%), Query Frame = 0 Query: 189 GVSALYTGLGVTLVGSIPAVSVYFGVYQAVKKALLQALPPGLGWSLLGVAASAGVGNTVASIFRVPYEVVKQRLQAGMYVSTGQALRTMYRTEGGLLAFFGTSGVASQILRDVPYAIVTLLTYESMRRTRAERRLGPGESKGGLTKGSTALEDSVMGALAGGVGSLVSNPMDVVKTRVMTQPGLY-PTVWSAVSKVWVEEGPSAFFKGTVPRLLHKVPANAIFFATYE 415 G Y GLGVT+ G++P V++YFGVY K+ LLQ G L +A SA +GN+VAS RVPYEVVKQ+LQ Y +T QA + + +E L F GVA Q++RDVPYA+VTLL YES++ T + R L S+ D +G +AGG+GS V+NPMDVVKTR+ T+ LY +V VS +W E G +AF +G+VPRL+HKVPANA FF YE Sbjct: 2 GFVNFYAGLGVTVFGAMPGVALYFGVYSYCKRVLLQT-DFGQSHKTLSIAMSAAIGNSVASFSRVPYEVVKQQLQTQAYDTTWQAFKAIAASENWLGMIFPKGGVAVQMIRDVPYAVVTLLLYESLQSTLS-RSLQQSTSQ-------QKAWDFALGGVAGGIGSWVTNPMDVVKTRLQTRSELYGGSVAQCVSSIWREGGAAAFLRGSVPRLMHKVPANAFFFLFYE 220
BLAST of EWM28945.1 vs. NCBI_GenBank
Match: gi|971514927|dbj|GAQ83294.1| (mitochondrial substrate carrier family protein [Klebsormidium nitens]) HSP 1 Score: 181.8 bits (460), Expect = 1.960e-49 Identity = 116/289 (40.14%), Postives = 167/289 (57.79%), Query Frame = 0 Query: 142 KNGCASGMAAACAKLLLQPFDTVKTLQQANKGSLGML-EAAQDLVSRKGVSALYTGLGVTLVGSIPAVSVYFGVYQAVKKALLQALPPGLGWSLLGVAASAGVGNTVASIFRVPYEVVKQRLQAGMYVSTGQALRTMYRTEGGLLAFFGTSGVASQILRDVPYAIVTLLTYESMRRTRAERRLGPGES----KGGLTKGSTALEDSVMGALAGGVGSLVSNPMDVVKTRVMTQP----GLYPTVWSAVSKVWVEEGPSAFFKGTVPRLLHKVPANAIFFATYEIFRGLL 421 +N A A+ +KL+LQPFDT KT+ Q++ S + A +V +GV LY G G ++ S P+ +++F Y+AVKK P LG +G A VGN VAS+ RVP EVVKQR+QA +Y + A+R M RTE G+ F+ G+ Q+ RD+PYA + +T+E++++ R P E+ + ++ L + MGA+AG V S+V+NPMDVVKTRVMTQ + V V + EGP AF G +PR++ KVPA+A+F YE + LL Sbjct: 3 ENFIAGASASFLSKLVLQPFDTTKTILQSSTNSYKTFTDCAVGVVKTQGVMGLYRGFGASIGTSAPSSAIFFATYEAVKKWTEAKFPKTLGQ--VGPIVGAAVGNVVASVVRVPPEVVKQRVQARVYPNMVVAIREMSRTE-GIGGFYTGYGI--QLARDIPYAAIQFMTFETLKKAYGVNR--PQEAGAPKRPVTSEAKKVLTNLWMGAVAGLVASVVTNPMDVVKTRVMTQDLTQGAVKIGVRQTVRSILKHEGPLAFTYGMLPRVMLKVPASALFLVAYEGIKRLL 284 The following BLAST results are available for this feature:
BLAST of EWM28945.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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