EWM28953.1, cds1720 (CDS) Nannochloropsis gaditana

Overview
NameEWM28953.1
Unique Namecds1720
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:1340768..1341397 -

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Properties
Property NameValue
Protein idEWM28953.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_102457g1.1603.mrna
GbkeyCDS
End range.
End range1341397
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:1340768..1341397 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM28953.1 vs. NCBI_GenBank
Match: gi|585111430|gb|EWM28953.1| (hypothetical protein Naga_102457g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 386.341 bits (991), Expect = 3.955e-135
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0 
Query:    1 PPSFPPSSLPPSLPPSLRHEPAVARRRLHVPLPRGRGPWSALRAWLPSHLPEGRGEGGAEGGREGGVGHLSPRRRLTGARREASSPRARPPPLALKKSLAPVPVPVPSPSPSLLPSLRRSHNNAVNCRVQGDVSRRSLCNSPSPGHSATFILTSLLAPSPSLPSSRPPSRPPALPPSAFEFRVASFALCGGSSLGRSLHAYYLQRRHRP 209
            PPSFPPSSLPPSLPPSLRHEPAVARRRLHVPLPRGRGPWSALRAWLPSHLPEGRGEGGAEGGREGGVGHLSPRRRLTGARREASSPRARPPPLALKKSLAPVPVPVPSPSPSLLPSLRRSHNNAVNCRVQGDVSRRSLCNSPSPGHSATFILTSLLAPSPSLPSSRPPSRPPALPPSAFEFRVASFALCGGSSLGRSLHAYYLQRRHRP
Sbjct:    1 PPSFPPSSLPPSLPPSLRHEPAVARRRLHVPLPRGRGPWSALRAWLPSHLPEGRGEGGAEGGREGGVGHLSPRRRLTGARREASSPRARPPPLALKKSLAPVPVPVPSPSPSLLPSLRRSHNNAVNCRVQGDVSRRSLCNSPSPGHSATFILTSLLAPSPSLPSSRPPSRPPALPPSAFEFRVASFALCGGSSLGRSLHAYYLQRRHRP 209
The following BLAST results are available for this feature:
BLAST of EWM28953.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585111430|gb|EWM28953.1|3.955e-135100.00hypothetical protein Naga_102457g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1724rna1724Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications