EWM28963.1, cds1710 (CDS) Nannochloropsis gaditana

Overview
NameEWM28963.1
Unique Namecds1710
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:1311369..1311376 -
Alignment locationCM002457.1:1310865..1310904 -
Alignment locationCM002457.1:1310577..1310661 -
Alignment locationCM002457.1:1310342..1310395 -
Alignment locationCM002457.1:1309806..1309890 -
Alignment locationCM002457.1:1309505..1309598 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28963.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100885g1.2070.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:1311369..1311376 -
CM002457.1supercontigCM002457.1:1310865..1310904 -
CM002457.1supercontigCM002457.1:1310577..1310661 -
CM002457.1supercontigCM002457.1:1310342..1310395 -
CM002457.1supercontigCM002457.1:1309806..1309890 -
CM002457.1supercontigCM002457.1:1309505..1309598 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM28963.1 vs. NCBI_GenBank
Match: gi|585111444|gb|EWM28963.1| (hypothetical protein Naga_100885g1 [Nannochloropsis gaditana])

HSP 1 Score: 226.868 bits (577), Expect = 5.067e-75
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0 
Query:    1 MKRDEAIFSALSEKKACLETNLAQAKSELEAKQAMLDDQKKAIAALEQAEKQKRDASEKEQQFIQEAVDRALEQAEMEHTRQLEAKEKSLRFLQDELTAQAAVFERRRAESEMKAREEKDG 121
            MKRDEAIFSALSEKKACLETNLAQAKSELEAKQAMLDDQKKAIAALEQAEKQKRDASEKEQQFIQEAVDRALEQAEMEHTRQLEAKEKSLRFLQDELTAQAAVFERRRAESEMKAREEKDG
Sbjct:    1 MKRDEAIFSALSEKKACLETNLAQAKSELEAKQAMLDDQKKAIAALEQAEKQKRDASEKEQQFIQEAVDRALEQAEMEHTRQLEAKEKSLRFLQDELTAQAAVFERRRAESEMKAREEKDG 121
The following BLAST results are available for this feature:
BLAST of EWM28963.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585111444|gb|EWM28963.1|5.067e-75100.00hypothetical protein Naga_100885g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1714rna1714Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications