EWM30545.1, cds171 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM30545.1 vs. NCBI_GenBank
Match: gi|585113209|gb|EWM30545.1| (hypothetical protein Naga_100013g48 [Nannochloropsis gaditana]) HSP 1 Score: 453.366 bits (1165), Expect = 2.016e-161 Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0
Query: 1 MRKMSHYSLVSRAIPVSISSRICASPLSYTSSPGFSLQHQRTQRPQYLPMLHSTTTSLFLVLGAMLCAVTKSFIPVPARASRSVTYFPAKPTAISLVGSTMRLTPYMFMSTSNFDEPLILTEENAALVLEAARQELGTMFGYTKENQAVGITGEVDLVAVEGISIIVRLKNRFWHDRKMVLTRISKFITDRIPEAMVEIEDVEQLKGDDAKSVSDFYAH 219
MRKMSHYSLVSRAIPVSISSRICASPLSYTSSPGFSLQHQRTQRPQYLPMLHSTTTSLFLVLGAMLCAVTKSFIPVPARASRSVTYFPAKPTAISLVGSTMRLTPYMFMSTSNFDEPLILTEENAALVLEAARQELGTMFGYTKENQAVGITGEVDLVAVEGISIIVRLKNRFWHDRKMVLTRISKFITDRIPEAMVEIEDVEQLKGDDAKSVSDFYAH
Sbjct: 1 MRKMSHYSLVSRAIPVSISSRICASPLSYTSSPGFSLQHQRTQRPQYLPMLHSTTTSLFLVLGAMLCAVTKSFIPVPARASRSVTYFPAKPTAISLVGSTMRLTPYMFMSTSNFDEPLILTEENAALVLEAARQELGTMFGYTKENQAVGITGEVDLVAVEGISIIVRLKNRFWHDRKMVLTRISKFITDRIPEAMVEIEDVEQLKGDDAKSVSDFYAH 219
BLAST of EWM30545.1 vs. NCBI_GenBank
Match: gi|298712920|emb|CBJ26822.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 103.219 bits (256), Expect = 6.250e-25 Identity = 50/95 (52.63%), Postives = 65/95 (68.42%), Query Frame = 0
Query: 116 EPLILTEENAALVLEAARQELGTMFGYTKENQAVGITGEVDLVAVEGISIIVRLKNRFWHDRKMVLTRISKFITDRIPEAM-VEIEDVEQLKGDD 209
E LILTEEN VL A++EL T+FG EN AVGITG+ + V ++G S++VRL RFWH++ VL R+ F+ RIPE + VEIED QL+ D
Sbjct: 4 ETLILTEENVVAVLAEAKRELSTLFGNNAENTAVGITGDCEFVCLDGPSVVVRLTGRFWHEKTTVLARVGNFVQTRIPECVDVEIEDPSQLEDAD 98
BLAST of EWM30545.1 vs. NCBI_GenBank
Match: gi|1210522120|dbj|GAX18882.1| (hypothetical protein FisN_8Hu097 [Fistulifera solaris]) HSP 1 Score: 105.531 bits (262), Expect = 9.100e-25 Identity = 52/89 (58.43%), Postives = 67/89 (75.28%), Query Frame = 0
Query: 118 LILTEENAALVLEAARQELGTMFGYTKENQAVGITGEVDLVAVEGISIIVRLKNRFWHDRKMVLTRISKFITDRIPEAM-VEIEDVEQL 205
L L+EEN VL A RQE+GT+FGYT EN+ VGITG VDLV ++G +II+RLK RFWH+RK VL R++ ++ RIPE + V +ED QL
Sbjct: 101 LELSEENVLGVLAACRQEVGTLFGYTAENRGVGITGGVDLVDLDGPTIILRLKGRFWHERKTVLERVANYLQQRIPEIIDVIVEDPWQL 189
BLAST of EWM30545.1 vs. NCBI_GenBank
Match: gi|873222756|emb|CEM30550.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 103.605 bits (257), Expect = 2.479e-24 Identity = 50/98 (51.02%), Postives = 70/98 (71.43%), Query Frame = 0
Query: 115 DEPLILTEENAALVLEAARQELGTMFGYTKENQAVGITGEVDLVAVEGISIIVRLKNRFWHDRKMVLTRISKFITDRIPEAM-VEIEDVEQLKGDDAK 211
++ LILTEEN LEA RQEL +FG ++EN++VGITG+V+ ++G +I+RLK RFWH R VL R++ F+ +RIPE + VEIED L D+A+
Sbjct: 73 EDQLILTEENVEKTLEACRQELSALFGNSEENRSVGITGDVEFAGLDGPLVILRLKGRFWHSRATVLERVTAFLLNRIPECLGVEIEDPAMLD-DNAE 169
BLAST of EWM30545.1 vs. NCBI_GenBank
Match: gi|551540595|ref|XP_005758674.1| (hypothetical protein EMIHUDRAFT_249978 [Emiliania huxleyi CCMP1516] >gi|485606424|gb|EOD06245.1| hypothetical protein EMIHUDRAFT_249978 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 101.679 bits (252), Expect = 1.337e-23 Identity = 48/90 (53.33%), Postives = 64/90 (71.11%), Query Frame = 0
Query: 118 LILTEENAALVLEAARQELGTMFGYTKENQAVGITGEVDLVAVEGISIIVRLKNRFWHDRKMVLTRISKFITDRIPEAM-VEIEDVEQLK 206
L+LTEEN VL+ A ++LGTMFG E+ AVGITG DLV ++G ++++RL RFWH R VL R+ F+ +RIPE + VEIED QL+
Sbjct: 54 LVLTEENVQAVLDEAERDLGTMFGSNPESAAVGITGRADLVELDGPTVVIRLSGRFWHARARVLERLEAFVLERIPECIGVEIEDPSQLE 143
BLAST of EWM30545.1 vs. NCBI_GenBank
Match: gi|551624691|ref|XP_005792548.1| (hypothetical protein EMIHUDRAFT_222964 [Emiliania huxleyi CCMP1516] >gi|485646763|gb|EOD40119.1| hypothetical protein EMIHUDRAFT_222964 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 99.7525 bits (247), Expect = 7.153e-23 Identity = 47/90 (52.22%), Postives = 64/90 (71.11%), Query Frame = 0
Query: 118 LILTEENAALVLEAARQELGTMFGYTKENQAVGITGEVDLVAVEGISIIVRLKNRFWHDRKMVLTRISKFITDRIPEAM-VEIEDVEQLK 206
L+LTEEN VL+ A ++LGTMFG E+ AVGITG +LV ++G ++++RL RFWH R VL R+ F+ +RIPE + VEIED QL+
Sbjct: 54 LVLTEENVQAVLDEAERDLGTMFGSNPESAAVGITGRAELVELDGPTVVIRLSGRFWHARARVLERLEAFVLERIPECIGVEIEDPSQLE 143
BLAST of EWM30545.1 vs. NCBI_GenBank
Match: gi|219127063|ref|XP_002183763.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217405000|gb|EEC44945.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 100.138 bits (248), Expect = 1.349e-22 Identity = 52/110 (47.27%), Postives = 70/110 (63.64%), Query Frame = 0
Query: 97 VGSTMRLTPYMFMSTSNFDEPLILTEENAALVLEAARQELGTMFGYTKENQAVGITGEVDLVAVEGISIIVRLKNRFWHDRKMVLTRISKFITDRIPEAM-VEIEDVEQL 205
+GS+++ P + S P LTEE VL A R ELGT+FGY+ EN+ VGITG VD V ++G S+I+ LK RFWH R VL R+ ++ RIPE + V++ED QL
Sbjct: 87 IGSSLK-APTIDRSADPIQVPAELTEETVLGVLSACRGELGTLFGYSAENRGVGITGGVDYVDLDGPSVILSLKGRFWHQRTAVLERVGNYLQQRIPEIVDVQVEDPWQL 195
BLAST of EWM30545.1 vs. NCBI_GenBank
Match: gi|397613260|gb|EJK62113.1| (hypothetical protein THAOC_17288 [Thalassiosira oceanica]) HSP 1 Score: 97.8265 bits (242), Expect = 1.463e-21 Identity = 51/98 (52.04%), Postives = 65/98 (66.33%), Query Frame = 0
Query: 118 LILTEENAALVLEAARQELGTMFGYTKENQAVGITGEVDLVAVEGISIIVRLKNRFWHDRKMVLTRISKFITDRIPEAM-VEIEDVEQLKGDDAKSVS 214
L L EE VL A RQE+GTMFGY EN+ VGITG VD V ++G ++IV LK RFWH R VL+R+S ++ RIPE + V +ED QL D+A +
Sbjct: 117 LALDEETVQGVLAACRQEIGTMFGYQAENRGVGITGGVDFVDLDGPTVIVSLKGRFWHQRPTVLSRVSSYLIARIPEIVEVIVEDEYQLT-DEANDAA 213
BLAST of EWM30545.1 vs. NCBI_GenBank
Match: gi|223999573|ref|XP_002289459.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220974667|gb|EED92996.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 96.6709 bits (239), Expect = 2.819e-21 Identity = 50/112 (44.64%), Postives = 70/112 (62.50%), Query Frame = 0
Query: 113 NFDEPLI---------LTEENAALVLEAARQELGTMFGYTKENQAVGITGEVDLVAVEGISIIVRLKNRFWHDRKMVLTRISKFITDRIPEAM-VEIEDVEQLKGDDAKSVS 214
++D PLI L+EE VL A RQE+GTMFGY EN+ VGITG VD V ++G ++++ LK RFWH R VL R+ ++ RIPE + V ++D +L D+A + S
Sbjct: 96 DYDGPLIDVPQGSQLELSEETVQGVLAACRQEIGTMFGYQAENRGVGITGGVDFVELDGPTVVLHLKGRFWHQRPTVLNRVGAYLMARIPEIVDVTVQDEYELT-DEANNAS 206
BLAST of EWM30545.1 vs. NCBI_GenBank
Match: gi|922865166|gb|KOO32279.1| (hypothetical protein Ctob_010676 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 96.2857 bits (238), Expect = 2.822e-21 Identity = 48/104 (46.15%), Postives = 66/104 (63.46%), Query Frame = 0
Query: 117 PLILTEENAALVLEAARQELGTMFGYTKENQAVGITGEVDLVAVEGISIIVRLKNRFWHDRKMVLTRISKFITDRIPEAM-VEIEDVEQLKGDDAKSVSDFYAH 219
P LTEENA VL+ ++LGT+FG E+ AVGITG D V +EG +++ L RFWH R MV+ R+ K++ DRIPE + VEI DV QL + + + +A
Sbjct: 7 PRELTEENARAVLQECMEDLGTLFGSNAESLAVGITGAADFVDLEGPILVISLSGRFWHQRSMVVERVKKYVMDRIPECVDVEIVDVAQLDDTNPTDLEEKFAE 110 The following BLAST results are available for this feature:
BLAST of EWM30545.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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