EWM28967.1, cds1706 (CDS) Nannochloropsis gaditana

Overview
NameEWM28967.1
Unique Namecds1706
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:1302143..1303410 +

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Properties
Property NameValue
Protein idEWM28967.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100918g1.887.mrna
GbkeyCDS
End range.
End range1303410
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:1302143..1303410 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM28967.1 vs. NCBI_GenBank
Match: gi|585111453|gb|EWM28967.1| (hypothetical protein Naga_100918g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 853.588 bits (2204), Expect = 0.000e+0
Identity = 423/423 (100.00%), Postives = 423/423 (100.00%), Query Frame = 0 
Query:    1 MRTRVFFDISPPSARFYYRTYALIVKVRVAKVMNDPSLSAVDAGFELKQRVERAGTSEEGRGWSGLVESHRGRSREEVQTQGMAGGMEGMEGREEGEEDTVVIDDDQRPLSIQRSSLLPGEPSSLTQNPLWPGPDEGTTDHEGVPWGGEEEIKTEGEEEATWDMLDDLPEIPHLCSIHASQSHALPATAPTEPLSPPHQAPSTHSSSSGGWYDVVKEVQDLPPPPSGPITTMFCWMYLDEWGNEFEYGPQAQLLLEREWRCGKAHALLLVPPPAPPCPSPPGESPLHRHTHRPHGAPPTDEGPPRSYVVHFASPQANGVEEHVQSNRFTGTQRRVRRMTRGPKPSHGLGAVVRRWKGRWRRGQETLATLGEAKRGKRAREGGEAEMGERAREGRGEEGGLEGDRGPWYSLLASQLCPSLPSSL 423
            MRTRVFFDISPPSARFYYRTYALIVKVRVAKVMNDPSLSAVDAGFELKQRVERAGTSEEGRGWSGLVESHRGRSREEVQTQGMAGGMEGMEGREEGEEDTVVIDDDQRPLSIQRSSLLPGEPSSLTQNPLWPGPDEGTTDHEGVPWGGEEEIKTEGEEEATWDMLDDLPEIPHLCSIHASQSHALPATAPTEPLSPPHQAPSTHSSSSGGWYDVVKEVQDLPPPPSGPITTMFCWMYLDEWGNEFEYGPQAQLLLEREWRCGKAHALLLVPPPAPPCPSPPGESPLHRHTHRPHGAPPTDEGPPRSYVVHFASPQANGVEEHVQSNRFTGTQRRVRRMTRGPKPSHGLGAVVRRWKGRWRRGQETLATLGEAKRGKRAREGGEAEMGERAREGRGEEGGLEGDRGPWYSLLASQLCPSLPSSL
Sbjct:    1 MRTRVFFDISPPSARFYYRTYALIVKVRVAKVMNDPSLSAVDAGFELKQRVERAGTSEEGRGWSGLVESHRGRSREEVQTQGMAGGMEGMEGREEGEEDTVVIDDDQRPLSIQRSSLLPGEPSSLTQNPLWPGPDEGTTDHEGVPWGGEEEIKTEGEEEATWDMLDDLPEIPHLCSIHASQSHALPATAPTEPLSPPHQAPSTHSSSSGGWYDVVKEVQDLPPPPSGPITTMFCWMYLDEWGNEFEYGPQAQLLLEREWRCGKAHALLLVPPPAPPCPSPPGESPLHRHTHRPHGAPPTDEGPPRSYVVHFASPQANGVEEHVQSNRFTGTQRRVRRMTRGPKPSHGLGAVVRRWKGRWRRGQETLATLGEAKRGKRAREGGEAEMGERAREGRGEEGGLEGDRGPWYSLLASQLCPSLPSSL 423
The following BLAST results are available for this feature:
BLAST of EWM28967.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585111453|gb|EWM28967.1|0.000e+0100.00hypothetical protein Naga_100918g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1710rna1710Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications