EWM30655.1, cds17 (CDS) Nannochloropsis gaditana

Overview
NameEWM30655.1
Unique Namecds17
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:55858..55983 -
Alignment locationCM002455.1:55720..55815 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM30655.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101628g1.2402.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:55858..55983 -
CM002455.1supercontigCM002455.1:55720..55815 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM30655.1 vs. NCBI_GenBank
Match: gi|585113350|gb|EWM30655.1| (hypothetical protein Naga_101628g1 [Nannochloropsis gaditana])

HSP 1 Score: 154.836 bits (390), Expect = 7.267e-48
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 
Query:    1 MRASVMDEIERDLIDHPPCTLHACFHFRANGRISKCQAAVRKIYIYSVFTNIHLKCGRQTYKENRLDVITCCS 73
            MRASVMDEIERDLIDHPPCTLHACFHFRANGRISKCQAAVRKIYIYSVFTNIHLKCGRQTYKENRLDVITCCS
Sbjct:    1 MRASVMDEIERDLIDHPPCTLHACFHFRANGRISKCQAAVRKIYIYSVFTNIHLKCGRQTYKENRLDVITCCS 73
The following BLAST results are available for this feature:
BLAST of EWM30655.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585113350|gb|EWM30655.1|7.267e-48100.00hypothetical protein Naga_101628g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna17rna17Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications