EWM28972.1, cds1698 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28972.1 vs. NCBI_GenBank
Match: gi|585111461|gb|EWM28972.1| (TRX domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 426.402 bits (1095), Expect = 4.412e-151 Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0
Query: 1 MPRSSIPPMPPGAAAAPALIAPKVVVEVFLDLNCPPSRRCFKTLYEGGIIEAYKDKAVQILFHNVIQPWHAVGAWMHEAALAVKDLQPSAFYPYANKVFDAMERFSDVNTEEMTRKEVMAALIALGVEAGVPRPALEERLALQGGSSGNKGTATTQAVKWACKYHRRRGVHVTPTVFVNGLEASEVSSAWGVEEWQRLLDECLEAR 206
MPRSSIPPMPPGAAAAPALIAPKVVVEVFLDLNCPPSRRCFKTLYEGGIIEAYKDKAVQILFHNVIQPWHAVGAWMHEAALAVKDLQPSAFYPYANKVFDAMERFSDVNTEEMTRKEVMAALIALGVEAGVPRPALEERLALQGGSSGNKGTATTQAVKWACKYHRRRGVHVTPTVFVNGLEASEVSSAWGVEEWQRLLDECLEAR
Sbjct: 1 MPRSSIPPMPPGAAAAPALIAPKVVVEVFLDLNCPPSRRCFKTLYEGGIIEAYKDKAVQILFHNVIQPWHAVGAWMHEAALAVKDLQPSAFYPYANKVFDAMERFSDVNTEEMTRKEVMAALIALGVEAGVPRPALEERLALQGGSSGNKGTATTQAVKWACKYHRRRGVHVTPTVFVNGLEASEVSSAWGVEEWQRLLDECLEAR 206
BLAST of EWM28972.1 vs. NCBI_GenBank
Match: gi|553194439|ref|XP_005855955.1| (hypothetical protein NGA_0546800, partial [Nannochloropsis gaditana CCMP526] >gi|422293098|gb|EKU20398.1| hypothetical protein NGA_0546800, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 409.838 bits (1052), Expect = 1.085e-144 Identity = 198/199 (99.50%), Postives = 199/199 (100.00%), Query Frame = 0
Query: 1 MPRSSIPPMPPGAAAAPALIAPKVVVEVFLDLNCPPSRRCFKTLYEGGIIEAYKDKAVQILFHNVIQPWHAVGAWMHEAALAVKDLQPSAFYPYANKVFDAMERFSDVNTEEMTRKEVMAALIALGVEAGVPRPALEERLALQGGSSGNKGTATTQAVKWACKYHRRRGVHVTPTVFVNGLEASEVSSAWGVEEWQRLL 199
MPRSSIPPMPPGAAAAPALIAPKVVVEVFLDLNCPPSRRCFKTLYEGGIIEAYKDKAVQILFHNVIQPWHAVGAWMHEAALAVKDLQPSAFYPYANKVFDAMERFSDVNTEEMTRKEVMAALIALGVEAGVPRPALEERLALQGGSSGNKGTATTQAVKWACKYHRRRGVHVTPTVFVNGLEASEVSSAWGVEEW+RLL
Sbjct: 1 MPRSSIPPMPPGAAAAPALIAPKVVVEVFLDLNCPPSRRCFKTLYEGGIIEAYKDKAVQILFHNVIQPWHAVGAWMHEAALAVKDLQPSAFYPYANKVFDAMERFSDVNTEEMTRKEVMAALIALGVEAGVPRPALEERLALQGGSSGNKGTATTQAVKWACKYHRRRGVHVTPTVFVNGLEASEVSSAWGVEEWKRLL 199
BLAST of EWM28972.1 vs. NCBI_GenBank
Match: gi|551573059|ref|XP_005772336.1| (hypothetical protein EMIHUDRAFT_101939 [Emiliania huxleyi CCMP1516] >gi|485623776|gb|EOD19907.1| hypothetical protein EMIHUDRAFT_101939 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 170.629 bits (431), Expect = 2.519e-49 Identity = 94/200 (47.00%), Postives = 123/200 (61.50%), Query Frame = 0
Query: 7 PPMPP---GAAAAPALIAPKVVVEVFLDLNCPPSRRCFKTLYEGGIIEAYKDKAVQILFHNVIQPWHAVGAWMHEAALAVKDLQPSAFYPYANKVFDAMER--FSDVNTEEMTRKEVMAALIALGVEAGVPRPALEERLALQGGSSGNK-GTATTQAVKWACKYHRRRGVHVTPTVFVNGLEASEVSSAWGVEEWQRLLD 200
PP+ P G A A V VE+FLDL CP SR+ F TL EG +IE D+A +L H V QPWHA G+++HEAALAVK++ P + Y +++ ++ F+D +T E +R ++ A L L GV R A +LA++ + GN G TQAVKW CK+HR RGVHVTPTV VNGLEA VSS W E+W L+
Sbjct: 66 PPLSPTAIGYVLNSAAAASPVRVEMFLDLICPFSRKMFVTLTEGRVIERAGDRACFVL-HQVPQPWHAQGSYVHEAALAVKEVAPDLYPNYIGAIYECFDKGKFTDRDTWEKSRTQINAELCDLAASVGVDRAATAAKLAMRASADGNNVGNEVTQAVKWICKHHRTRGVHVTPTVHVNGLEAGIVSSGWTPEQWLAFLE 264
BLAST of EWM28972.1 vs. NCBI_GenBank
Match: gi|551619529|ref|XP_005790348.1| (hypothetical protein EMIHUDRAFT_109518 [Emiliania huxleyi CCMP1516] >gi|485643959|gb|EOD37919.1| hypothetical protein EMIHUDRAFT_109518 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 171.014 bits (432), Expect = 3.376e-49 Identity = 94/200 (47.00%), Postives = 123/200 (61.50%), Query Frame = 0
Query: 7 PPMPP---GAAAAPALIAPKVVVEVFLDLNCPPSRRCFKTLYEGGIIEAYKDKAVQILFHNVIQPWHAVGAWMHEAALAVKDLQPSAFYPYANKVFDAMER--FSDVNTEEMTRKEVMAALIALGVEAGVPRPALEERLALQGGSSGNK-GTATTQAVKWACKYHRRRGVHVTPTVFVNGLEASEVSSAWGVEEWQRLLD 200
PP+ P G A A V VE+FLDL CP SR+ F TL EG +IE D+A +L H V QPWHA G+++HEAALAVK++ P + Y +++ ++ F+D +T E +R ++ A L L GV R A +LA++ + GN G TQAVKW CK+HR RGVHVTPTV VNGLEA VSS W E+W L+
Sbjct: 83 PPLSPTAIGYVLNSAAAASPVRVEMFLDLICPFSRKMFVTLTEGRVIERAGDRACFVL-HQVPQPWHAQGSYVHEAALAVKEVAPDLYPNYIGAIYECFDKGKFTDRDTWEKSRTQINAELCDLAASVGVDRAATAAKLAMRASADGNNVGNEVTQAVKWICKHHRTRGVHVTPTVHVNGLEAGIVSSGWTPEQWLAFLE 281
BLAST of EWM28972.1 vs. NCBI_GenBank
Match: gi|676387821|ref|XP_009037189.1| (hypothetical protein AURANDRAFT_6387, partial [Aureococcus anophagefferens] >gi|323452082|gb|EGB07957.1| hypothetical protein AURANDRAFT_6387, partial [Aureococcus anophagefferens]) HSP 1 Score: 151.369 bits (381), Expect = 4.584e-43 Identity = 78/177 (44.07%), Postives = 113/177 (63.84%), Query Frame = 0
Query: 22 PKVVVEVFLDLNCPPSRRCFKTLYEGGIIEAYKDKAVQILFHNVIQPWHAVGAWMHEAALAVKDLQPSAFYPYANKVFDAMERFSDVNTEEMTRKEVMAALIALGVEAGVPRPALEERLA---LQGGSSGNKGTATTQAVKWACKYHRRRGVHVTPTVFVNGLEASEVSSAWGVEEW 195
P + +E+F+D CP SR+ F T+Y GG++ A V+++ NV+Q WH A+MHEA+LAV+ L + F+P+A K+F F D + +M+R ++ AL+ + E V AL +LA ++G S N G A T +KWA KYHR RGVHVTPTVF+NG+EA +VSS W ++W
Sbjct: 1 PALEIEIFVDFCCPYSRKLFDTVY-GGVVGAAPAGQVELILQNVVQCWHPQSAYMHEASLAVRALDEAKFFPFAAKLFSRQVEFFDAHIWDMSRAQIYDALVEIASEF-VDAEALRAKLARTIVEG--SLNTGNAATLDLKWATKYHRVRGVHVTPTVFLNGVEAPDVSSGWDADQW 173
BLAST of EWM28972.1 vs. NCBI_GenBank
Match: gi|544214465|ref|XP_005537379.1| (hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D] >gi|449017941|dbj|BAM81343.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 140.198 bits (352), Expect = 2.375e-37 Identity = 79/187 (42.25%), Postives = 108/187 (57.75%), Query Frame = 0
Query: 22 PKVVVEVFLDLNCPPSRRCFKTLYEGGIIEAYKDKAVQILFHNVIQPWHAVGAWMHEAALAVKDLQPSA-FYPYANKVFDAMERFSDVNTEEMTRKEVMAALIALGVEAGVPRPA--LEERLALQGGSSGNKGTATTQAVKWACKYHRRRGVHVTPTVFVNGLEASEVSSAWGVEEWQRLLDECLEA 205
P+V+VEVFLD NCP S++ F TL++ + D VQ F V QPWHA +MHEAALA + + A F+ + +F E + D + TR++V L +AGV A + ERL +SGN G A VK+AC+YHR RGVHVTPTV +NG+ SS+W V+EW+ +D L +
Sbjct: 92 PQVLVEVFLDYNCPYSKKAFLTLWQEVLPHYRADSRVQFAFGLVPQPWHAQTCYMHEAALAARQVSGDAGFWKASAALFAQQEDWVDEKVLDKTRRQVYEELAQCLAKAGVVSSASLITERLLT---ASGNSGNAVGADVKFACRYHRVRGVHVTPTVHINGIPELNASSSWTVQEWKERIDSLLSS 275
BLAST of EWM28972.1 vs. NCBI_GenBank
Match: gi|922857814|gb|KOO26017.1| (thioredoxin-like protein [Chrysochromulina sp. CCMP291]) HSP 1 Score: 134.806 bits (338), Expect = 1.334e-36 Identity = 71/156 (45.51%), Postives = 92/156 (58.97%), Query Frame = 0
Query: 46 EGGIIEAYKDKAVQILFHNVIQPWHAVGAWMHEAALAVKDLQPSAFYPYANKVFDAME--RFSDVNTEEMTRKEVMAALIALGVEAGVPRPALEERLALQGGSSGNKGTATTQAVKWACKYHRRRGVHVTPTVFVNGLEASEVSSAWGVEEWQRLL 199
E + E DK V +F+ VIQPWH G +HEAALAVK P F+ Y +F A++ RF D T +++R ++ L+ + G+ R A+E LA + +GN G TQ +KW KYHR RGVHVTPTV VNGLEA VSS W E+W L
Sbjct: 7 EAKLNEKAGDK-VCFIFNQVIQPWHPQGTCVHEAALAVKQCAPDKFFAYCTALFTALDNGRFKDDTTWDLSRAQIYEELLVIAAATGIDRAAVEALLA-RSPEAGNSGNQMTQMIKWVVKYHRCRGVHVTPTVHVNGLEAGVVSSGWSTEQWLEFL 160
BLAST of EWM28972.1 vs. NCBI_GenBank
Match: gi|1183474358|gb|ORY98223.1| (thioredoxin-like protein [Syncephalastrum racemosum]) HSP 1 Score: 129.028 bits (323), Expect = 6.146e-34 Identity = 68/194 (35.05%), Postives = 105/194 (54.12%), Query Frame = 0
Query: 12 GAAAAPALIAPKVVVEVFLDLNCPPSRRCFKTLYEGG--IIEAYKDKAVQILFHNVIQPWHAVGAWMHEAALAVKDLQPSAFYPYANKVFDAMERFSDVNTEEMTRKEVMAALIALGVEAGVPRPALEERLALQGGSSGNKGTATTQAVKWACKYHRRRGVHVTPTVFVNGLEASEVSSAWGVEEWQRLLDECL 203
G AAAP +E++LD CP S + +K + E +E VQ++F +QPWHA +HEAALAV+ + S FYP+++ +F + F D E TR++++ + + GVP +E L G + NKG A + +K A K R+ G+HV+PTV +GL+ + VSS+W + +WQ L
Sbjct: 13 GVAAAPH------TLEIYLDYVCPFSAKIYKHIRETVWPFVEQKYPNKVQLIFRQQVQPWHASSTLVHEAALAVEQIDASKFYPFSDALFARQKDFFDEAVELKTRRDLVKQVSEIAASVGVPADKVEALLQNGTGEAQNKGNAVSNNLKLAIKLGRQTGIHVSPTVLFDGLQDNAVSSSWELSQWQEYFQSKL 200
BLAST of EWM28972.1 vs. NCBI_GenBank
Match: gi|545707293|ref|XP_005705961.1| (thioredoxin-like protein [Galdieria sulphuraria] >gi|452822422|gb|EME29441.1| thioredoxin-like protein [Galdieria sulphuraria]) HSP 1 Score: 129.413 bits (324), Expect = 1.484e-33 Identity = 73/205 (35.61%), Postives = 110/205 (53.66%), Query Frame = 0
Query: 7 PPMPP-------GAAAAPALIAPKVVVEVFLDLNCPPSRRCFKTLYEGGIIEAYKDKAVQILFHNVIQPWHAVGAWMHEAALAVKDLQPSAFYPYANKVFDAMERFSDVNTEEMTRKEVMAALIALGVEAGVPRPALEERLALQGGSSGNKGTATTQAVKWACKYHRRRGVHVTPTVFVNGLEASEVSSAWGVEEWQRLLDECLE 204
PP+P G+ +AP + ++VFLD CP SR + L + II A+ ++ V +F N IQPWH A MHEA+LAV + F+ Y+ +F+ + F D N + +R+E+ L L + +P + L ++G +GN G +K+A KY R+ GVH++PT FVNG+E + SAW EEW L L+
Sbjct: 45 PPLPERKLGFSFGSFSAP------IELQVFLDYCCPFSRIAYLKLVDS-IIPAFNNQ-VLFVFQNQIQPWHPQSALMHEASLAVGLIAKEKFFDYSRLLFEHQDEFFDQNCYDKSRRELYGDLANLASKIHIPEDKMLNLLHIRG--TGNDGNQVQSLMKFAIKYSRKLGVHISPTYFVNGIEDTAAGSAWNKEEWLERLRPLLQ 239
BLAST of EWM28972.1 vs. NCBI_GenBank
Match: gi|45185869|ref|NP_983585.1| (ACR183Cp [Eremothecium gossypii ATCC 10895] >gi|44981659|gb|AAS51409.1| ACR183Cp [Ashbya gossypii ATCC 10895] >gi|374106791|gb|AEY95700.1| FACR183Cp [Eremothecium gossypii FDAG1]) HSP 1 Score: 127.102 bits (318), Expect = 3.096e-33 Identity = 68/168 (40.48%), Postives = 99/168 (58.93%), Query Frame = 0
Query: 23 KVVVEVFLDLNCPPSRRCFKTLYEGGIIEAYKDKAVQILFHNVIQPWHAVGAWMHEAALAVKDLQPSAFYPYANKVFDAMERFSDVNTEEMTRKEVMAALIALGVE-AGVPRPALEERLALQGGSSGNKGTATTQAVKWACKYHRRRGVHVTPTVFVNGLEASEVSSA 189
+ VE++LD CP SRR F ++ A D QI+F++VIQPWH +MHEAALAV L P+AF P++ ++F +R+ D T + +R V L + AG+P A+ + LA++ GN G A + +K +YHR+ GVHVTP+V VNG+ A + SA
Sbjct: 20 RDTVELYLDYCCPFSRRLFLAWHDALFPRARADSRFQIVFNHVIQPWHPASQYMHEAALAVARLDPAAFLPFSRELFLHQDRWFDTRTADKSRHAVYRELADFARDAAGLPADAVYDLLAVR----GNDGNAVVRDLKHYVRYHRQNGVHVTPSVAVNGVLAPAIDSA 183 The following BLAST results are available for this feature:
BLAST of EWM28972.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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