EWM28977.1, cds1696 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28977.1 vs. NCBI_GenBank
Match: gi|585111467|gb|EWM28977.1| (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana]) HSP 1 Score: 728.783 bits (1880), Expect = 0.000e+0 Identity = 357/357 (100.00%), Postives = 357/357 (100.00%), Query Frame = 0
Query: 1 MFPKPQKKDNIMASVDLISGLYGVLLAFGIMLLAVLLLPLVVYLISRKPYPTLKTLSSTKTLGGVLVTGASTGIGRHAAFYLARQGFLVFAGVRKPADGEALLRAYLDEESKQTSKSRSRGKVSPAKQGVLHFLILDITKPFQIAAAVRSVQEELSRRGGLPFLGLVNNAGVTGGADPVEFLPLEHNRNTFEVNFYGPLAVTQAFLPLLRQAPQGRIVNVSSMAGIVTRPLGATYSCTKFALEALSDTLRVELGHLGVSVSVIQPGYIRSEIFGKADEQHQHRMQELPVECSALYGHLYTVDKTNALIAKASDPIVCSRAIHHALTSPYPKVSLLWIRRACGRRSSCFRIYPQERFY 357
MFPKPQKKDNIMASVDLISGLYGVLLAFGIMLLAVLLLPLVVYLISRKPYPTLKTLSSTKTLGGVLVTGASTGIGRHAAFYLARQGFLVFAGVRKPADGEALLRAYLDEESKQTSKSRSRGKVSPAKQGVLHFLILDITKPFQIAAAVRSVQEELSRRGGLPFLGLVNNAGVTGGADPVEFLPLEHNRNTFEVNFYGPLAVTQAFLPLLRQAPQGRIVNVSSMAGIVTRPLGATYSCTKFALEALSDTLRVELGHLGVSVSVIQPGYIRSEIFGKADEQHQHRMQELPVECSALYGHLYTVDKTNALIAKASDPIVCSRAIHHALTSPYPKVSLLWIRRACGRRSSCFRIYPQERFY
Sbjct: 1 MFPKPQKKDNIMASVDLISGLYGVLLAFGIMLLAVLLLPLVVYLISRKPYPTLKTLSSTKTLGGVLVTGASTGIGRHAAFYLARQGFLVFAGVRKPADGEALLRAYLDEESKQTSKSRSRGKVSPAKQGVLHFLILDITKPFQIAAAVRSVQEELSRRGGLPFLGLVNNAGVTGGADPVEFLPLEHNRNTFEVNFYGPLAVTQAFLPLLRQAPQGRIVNVSSMAGIVTRPLGATYSCTKFALEALSDTLRVELGHLGVSVSVIQPGYIRSEIFGKADEQHQHRMQELPVECSALYGHLYTVDKTNALIAKASDPIVCSRAIHHALTSPYPKVSLLWIRRACGRRSSCFRIYPQERFY 357
BLAST of EWM28977.1 vs. NCBI_GenBank
Match: gi|585111466|gb|EWM28976.1| (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana]) HSP 1 Score: 669.848 bits (1727), Expect = 0.000e+0 Identity = 332/335 (99.10%), Postives = 332/335 (99.10%), Query Frame = 0
Query: 1 MFPKPQKKDNIMASVDLISGLYGVLLAFGIMLLAVLLLPLVVYLISRKPYPTLKTLSSTKTLGGVLVTGASTGIGRHAAFYLARQGFLVFAGVRKPADGEALLRAYLDEESKQTSKSRSRGKVSPAKQGVLHFLILDITKPFQIAAAVRSVQEELSRRGGLPFLGLVNNAGVTGGADPVEFLPLEHNRNTFEVNFYGPLAVTQAFLPLLRQAPQGRIVNVSSMAGIVTRPLGATYSCTKFALEALSDTLRVELGHLGVSVSVIQPGYIRSEIFGKADEQHQHRMQELPVECSALYGHLYTVDKTNALIAKASDPIVCSRAIHHALTSPYPKVSLL 335
MFPKPQKKDNIMASVDLISGLYGVLLAFGIMLLAVLLLPLVVYLISRKPYPTLKTLSSTKTLGGVLVTGASTGIGRHAAFYLARQGFLVFAGVRKPADGEALLRAYLDEESKQTSKSRSRGKVSPAKQGVLHFLILDITKPFQIAAAVRSVQEELSRRGGLPFLGLVNNAGVTGGADPVEFLPLEHNRNTFEVNFYGPLAVTQAFLPLLRQAPQGRIVNVSSMAGIVTRPLGATYSCTKFALEALSDTLRVELGHLGVSVSVIQPGYIRSEIFGKADEQHQHRMQELPVECSALYGHLYTVDKTNALIAKASDPIVCSRAIHHALTSPYPK L
Sbjct: 1 MFPKPQKKDNIMASVDLISGLYGVLLAFGIMLLAVLLLPLVVYLISRKPYPTLKTLSSTKTLGGVLVTGASTGIGRHAAFYLARQGFLVFAGVRKPADGEALLRAYLDEESKQTSKSRSRGKVSPAKQGVLHFLILDITKPFQIAAAVRSVQEELSRRGGLPFLGLVNNAGVTGGADPVEFLPLEHNRNTFEVNFYGPLAVTQAFLPLLRQAPQGRIVNVSSMAGIVTRPLGATYSCTKFALEALSDTLRVELGHLGVSVSVIQPGYIRSEIFGKADEQHQHRMQELPVECSALYGHLYTVDKTNALIAKASDPIVCSRAIHHALTSPYPKTRYL 335
BLAST of EWM28977.1 vs. NCBI_GenBank
Match: gi|553194466|ref|XP_005855962.1| (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526] >gi|422293105|gb|EKU20405.1| short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 639.417 bits (1648), Expect = 0.000e+0 Identity = 317/324 (97.84%), Postives = 320/324 (98.77%), Query Frame = 0
Query: 12 MASVDLISGLYGVLLAFGIMLLAVLLLPLVVYLISRKPYPTLKTLSSTKTLGGVLVTGASTGIGRHAAFYLARQGFLVFAGVRKPADGEALLRAYLDEESKQTSKSRSRGKVSPAKQGVLHFLILDITKPFQIAAAVRSVQEELSRRGGLPFLGLVNNAGVTGGADPVEFLPLEHNRNTFEVNFYGPLAVTQAFLPLLRQAPQGRIVNVSSMAGIVTRPLGATYSCTKFALEALSDTLRVELGHLGVSVSVIQPGYIRSEIFGKADEQHQHRMQELPVECSALYGHLYTVDKTNALIAKASDPIVCSRAIHHALTSPYPKVSLL 335
MASVDLISGLYGVLLAFGIMLLAVLLLPLVVYLISRKPYPTLKTLSSTKTLGGVLVTGASTGIGRHAAFYLARQGFLVFAGVRKPADGEALL+AYLDEESKQTSKSRSRGKVSPAKQGVLH+LILDITKPFQIAAAVRSVQEELSRRGGLPFLGLVNNAGVTGGADPVEFLPLEHNRNTFEVNFYGPLAVTQAFLPLLRQAPQGRI+NVSSMAGIVTRPLGATYSCTKFALEALSDTLRVELGHLGVSVSVIQPGYIRSEIFGKADEQHQHRMQELP ECSALYGHLYTVDKTNALIAKASDPIVCSRAIHHALTSPYPK L
Sbjct: 1 MASVDLISGLYGVLLAFGIMLLAVLLLPLVVYLISRKPYPTLKTLSSTKTLGGVLVTGASTGIGRHAAFYLARQGFLVFAGVRKPADGEALLKAYLDEESKQTSKSRSRGKVSPAKQGVLHYLILDITKPFQIAAAVRSVQEELSRRGGLPFLGLVNNAGVTGGADPVEFLPLEHNRNTFEVNFYGPLAVTQAFLPLLRQAPQGRIINVSSMAGIVTRPLGATYSCTKFALEALSDTLRVELGHLGVSVSVIQPGYIRSEIFGKADEQHQHRMQELPEECSALYGHLYTVDKTNALIAKASDPIVCSRAIHHALTSPYPKTRYL 324
BLAST of EWM28977.1 vs. NCBI_GenBank
Match: gi|553181318|ref|XP_005853543.1| (3-hydroxybutyrate dehydrogenase [Nannochloropsis gaditana CCMP526] >gi|422295513|gb|EKU22812.1| 3-hydroxybutyrate dehydrogenase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 231.106 bits (588), Expect = 6.568e-70 Identity = 138/306 (45.10%), Postives = 180/306 (58.82%), Query Frame = 0
Query: 28 FGIMLLAVLL-LPLVVYLISRKPYPTLKTLSSTKTLGGVLVTGASTGIGRHAAFYLARQGFLVFAGVRKPADGEALLRAYLDEESKQTSKSRSRGKVSPAKQGVLHFLILDITKPFQIAAAVRSVQEELSRRGGLPFLGLVNNAGVTGGADPVEFLPLEHNRNTFEVNFYGPLAVTQAFLPLLRQAPQGRIVNVSSMAGIVTRPLGATYSCTKFALEALSDTLRVELGHLGVSVSVIQPGYIRSEIFGKADEQHQHRMQELPVECSALYGHLY-TVDKTNALIAKASDPIVCSRAIHHALTSPYPK 331
F +L+A L +P ++ L +R+ YP G V+VTGASTGIG HAA LAR GFLVFAGVRK DGE L + S+ + P +ILD+TK QI AV++V L GG P +GLVNNAGV G PVEF ++ R F+VNF+G +A T+AFL LLR A +GR++N+SS+AG+ P Y +K+ALEA SD LRVE+G LGVSVSV++P Y+ S IFGK + + + + +YGHL T I KAS P V S AI HALT+ +P+
Sbjct: 6 FSALLVAFLASIPYLLDLATRREYPV------PPPEGAVVVTGASTGIGAHAAHSLARAGFLVFAGVRKELDGETL--------KAEAPTLESQENIVP--------IILDVTKQEQIDKAVQTVSSTLDSLGGRPLVGLVNNAGVGGSNKPVEFQSMDDLRWLFDVNFFGAIATTKAFLALLR-ASKGRVINISSLAGLTVAPFMTDYCASKWALEAFSDALRVEMGELGVSVSVVEPAYVTSAIFGKIATRVKETADSVSEKVMEVYGHLVQNPTYTRRCIEKASPPTVTSDAILHALTAKHPQ 288
BLAST of EWM28977.1 vs. NCBI_GenBank
Match: gi|585102158|gb|EWM21817.1| (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana]) HSP 1 Score: 228.409 bits (581), Expect = 5.616e-69 Identity = 137/306 (44.77%), Postives = 179/306 (58.50%), Query Frame = 0
Query: 28 FGIMLLAVLL-LPLVVYLISRKPYPTLKTLSSTKTLGGVLVTGASTGIGRHAAFYLARQGFLVFAGVRKPADGEALLRAYLDEESKQTSKSRSRGKVSPAKQGVLHFLILDITKPFQIAAAVRSVQEELSRRGGLPFLGLVNNAGVTGGADPVEFLPLEHNRNTFEVNFYGPLAVTQAFLPLLRQAPQGRIVNVSSMAGIVTRPLGATYSCTKFALEALSDTLRVELGHLGVSVSVIQPGYIRSEIFGKADEQHQHRMQELPVECSALYGHLY-TVDKTNALIAKASDPIVCSRAIHHALTSPYPK 331
F +L+A L +P ++ L +R+ YP G V+VTGASTGIG HAA LAR GFLVFAGVRK DGE L + S+ + P +ILD+TK QI AV++V L GG P +GLVNNAGV G PVEF ++ R F+VNF+G +A T+AFL LLR A +GR++N+SS+AG+ P Y +K+ALEA SD LRVE+G LGVSVSV++P Y+ S IFGK + + + + +YGHL T I KAS P V S AI ALT+ +P+
Sbjct: 6 FSALLVAFLASIPYLLDLATRREYPV------PPPEGAVVVTGASTGIGAHAAHSLARTGFLVFAGVRKELDGETL--------KAEAPTLESQENIVP--------IILDVTKQEQIDKAVQTVSSTLDSLGGRPLVGLVNNAGVGGSNKPVEFQSMDDLRWLFDVNFFGAIATTKAFLALLR-ASKGRVINISSLAGLTVAPFMTDYCASKWALEAFSDALRVEMGELGVSVSVVEPAYVTSAIFGKIATRMKETADSVSEKVMEVYGHLVQNPTYTRRCIEKASPPTVTSDAILDALTAKHPQ 288
BLAST of EWM28977.1 vs. NCBI_GenBank
Match: gi|517276393|ref|WP_018465211.1| (short-chain dehydrogenase/reductase [Meiothermus timidus]) HSP 1 Score: 197.208 bits (500), Expect = 2.601e-57 Identity = 114/269 (42.38%), Postives = 164/269 (60.97%), Query Frame = 0
Query: 65 VLVTGASTGIGRHAAFYLARQGFLVFAGVRKPADGEALLRAYLDEESKQTSKSRSRGKVSPAKQGVLHFLILDITKPFQIAAAVRSVQEELSRRGGLPFLGLVNNAGVTGGADPVEFLPLEHNRNTFEVNFYGPLAVTQAFLPLLRQAPQGRIVNVSSMAGIVTRPLGATYSCTKFALEALSDTLRVELGHLGVSVSVIQPGYIRSEIFGKADEQHQHRMQELPVECSALYGHLYT--VDKTNALIAKASDPIVCSRAIHHALTSPYPK 331
+L+TGAS+GIG A YLA +G +V+AGVR+ DGE +++ +G+LH ++LD+T+ IA A R ++E+ SR GLVNNAG+ A P+EFLPLE R EVN G +AVTQA L +LRQ +GRIVN+SS++G + PL YS +KFALEA+SD+LR EL G+ VSVI+PG I++ I+ K + + +++LP E ALYG + ++ ++ PI +RA+ HALT+P P+
Sbjct: 4 ILITGASSGIGESCALYLAEKGHMVWAGVRRLEDGE---------------------RLAHQAKGLLHPVLLDVTEGESIARAARVIREQASR-----LDGLVNNAGIAV-AGPLEFLPLEELRRQLEVNVIGQVAVTQAVLGMLRQG-RGRIVNMSSISGRIAAPLFGPYSASKFALEAISDSLRRELKAWGIEVSVIEPGSIQTPIWSKGVSRGRQLLEKLPPEAKALYGRAIEGQIRYVESVDGRSLPPIEVARAVEHALTTPRPR 244
BLAST of EWM28977.1 vs. NCBI_GenBank
Match: gi|1184689678|ref|WP_085249294.1| (hypothetical protein [Mycobacterium riyadhense] >gi|1183168399|gb|ORW84999.1| hypothetical protein AWC22_12315 [Mycobacterium riyadhense]) HSP 1 Score: 185.652 bits (470), Expect = 8.322e-53 Identity = 118/269 (43.87%), Postives = 154/269 (57.25%), Query Frame = 0
Query: 65 VLVTGASTGIGRHAAFYLARQGFLVFAGVRKPADGEALLRAYLDEESKQTSKSRSRGKVSPAKQGVLHFLILDITKPFQIAAAVRSVQEELSRRGGLPFLGLVNNAGVTGGADPVEFLPLEHNRNTFEVNFYGPLAVTQAFLPLLRQAPQGRIVNVSSMAGIVTRPLGATYSCTKFALEALSDTLRVELGHLGVSVSVIQPGYIRSEIFGKADEQHQHRMQELPVECSALYGH--LYTVDKTNALIAKASDPIVCSRAIHHALTSPYPK 331
V++TGASTGIGR +A L R GF VFAG+RK ADGEAL +V+ +++ L + LD+T I AA R V + + R G GLVNNAG T PVE+L L+ R+ EVN GPLAVT+AFLPLL + GRIVNV+S AG PL A Y K LE LSD LR+ELG LGV VSVI+PG++ +++ GK + ++ LP E + Y T + + A+ S P V + + HALTS P+
Sbjct: 4 VVITGASTGIGRASALALDRNGFRVFAGIRKQADGEAL-------------------RVAASER--LTPVFLDVTAERSIGAAARLVADAVGRAGEAGLAGLVNNAGTTL-PGPVEYLALDAFRHQLEVNLVGPLAVTKAFLPLLVRG-GGRIVNVTSGAGKAGVPLMAPYVAAKHGLEGLSDVLRLELGQLGVGVSVIEPGFVATDMRGKLERDTDDVIRSLPEEGRSRYARQLAATAEAISTHAAQGSTPDVIADVVVHALTSKKPR 249
BLAST of EWM28977.1 vs. NCBI_GenBank
Match: gi|553192143|ref|XP_005855521.1| (1-acylglycerone phosphate reductase, partial [Nannochloropsis gaditana CCMP526] >gi|422293540|gb|EKU20840.1| 1-acylglycerone phosphate reductase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 186.037 bits (471), Expect = 1.029e-52 Identity = 125/319 (39.18%), Postives = 177/319 (55.49%), Query Frame = 0
Query: 16 DLISGL-YGVLLAFGIMLLAVLLLPLVVYLISRKPYPTLKTLSSTKTLGGVLVTGASTGIGRHAAFYLARQGFLVFAGVRKPADGEALLRAYLDEESKQTSKSRSRGKVSPAKQGVLHFLILDITKPFQIAAAVRSVQEELSRRGGLPFLGLVNNAGVTGGADPVEFLPLEHNRNTFEVNFYGPLAVTQAFLPLLRQAPQGRIVNVSSMAGIVTRPLGATYSCTKFALEALSDTLRVELGHLGVSVSVIQPGYIRSEIFGKADEQHQHRMQELPVECSALYGHLYTVD---KTNALIAKASDPIVCSRAIHHALTSPYP 330
DL+ G+ G+L AF +LA++ L V+ I RK +P G +++TGASTGIG HAA +LARQG++V+ VRKPAD EA+ L L +I+D+ + I ++ ELS+ +P +GLVNNAGV P+EF PL R+ F+++ GPL +TQ LP +R A +GRIVN+SS+ +V P GA Y +K A+E +SD LR EL SVS++QP Y+ + IF K + +++ P E YG+ + + K A + KAS P V + AI HALTSPYP
Sbjct: 18 DLLRGVALGLLGAF---VLAIMSYHLTVF-IFRKRFPV------PPKGGAIVITGASTGIGNHAAQHLARQGYIVYCTVRKPADVEAIQALGLPN---------------------LRPIIMDVAQAKSIENGAETILAELSKNN-IPLIGLVNNAGV-AQKFPLEFHPLTDLRSMFDIHVIGPLELTQRLLPAIR-ANKGRIVNLSSITALVLLPTGAAYGASKLAVEGISDGLRRELVDFDCSVSIVQPAYVNTAIFKKVTQSIDTKVEVSP-EIMTTYGYFFRTEKRIKDRAAVDKASPPSVTTDAITHALTSPYP 301
BLAST of EWM28977.1 vs. NCBI_GenBank
Match: gi|585107069|gb|EWM25314.1| (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana]) HSP 1 Score: 186.037 bits (471), Expect = 1.558e-52 Identity = 125/319 (39.18%), Postives = 177/319 (55.49%), Query Frame = 0
Query: 16 DLISGL-YGVLLAFGIMLLAVLLLPLVVYLISRKPYPTLKTLSSTKTLGGVLVTGASTGIGRHAAFYLARQGFLVFAGVRKPADGEALLRAYLDEESKQTSKSRSRGKVSPAKQGVLHFLILDITKPFQIAAAVRSVQEELSRRGGLPFLGLVNNAGVTGGADPVEFLPLEHNRNTFEVNFYGPLAVTQAFLPLLRQAPQGRIVNVSSMAGIVTRPLGATYSCTKFALEALSDTLRVELGHLGVSVSVIQPGYIRSEIFGKADEQHQHRMQELPVECSALYGHLYTVD---KTNALIAKASDPIVCSRAIHHALTSPYP 330
DL+ G+ G+L AF +LA++ L V+ I RK +P G +++TGASTGIG HAA +LARQG++V+ VRKPAD EA+ L L +I+D+ + I ++ ELS+ +P +GLVNNAGV P+EF PL R+ F+++ GPL +TQ LP +R A +GRIVN+SS+ +V P GA Y +K A+E +SD LR EL SVS++QP Y+ + IF K + +++ P E YG+ + + K A + KAS P V + AI HALTSPYP
Sbjct: 10 DLLRGVALGLLGAF---VLAIMSYHLTVF-IFRKRFPV------PPKGGAIVITGASTGIGNHAAQHLARQGYIVYCTVRKPADVEAIQALGLPN---------------------LRPIIMDVAQAKSIENGAETILAELSKNN-IPLIGLVNNAGV-AQKFPLEFHPLTDLRSMFDIHVIGPLELTQRLLPAIR-ANKGRIVNLSSITALVLLPTGAAYGASKLAVEGISDGLRRELVDFDCSVSIVQPAYVNTAIFKKVTQSIDTKVEVSP-EIMTTYGYFFRTEKRIKDRAAVDKASPPSVTTDAITHALTSPYP 293
BLAST of EWM28977.1 vs. NCBI_GenBank
Match: gi|1210211457|dbj|BAZ30497.1| (short-chain dehydrogenase/reductase SDR [Cylindrospermum sp. NIES-4074]) HSP 1 Score: 182.185 bits (461), Expect = 1.797e-51 Identity = 111/274 (40.51%), Postives = 156/274 (56.93%), Query Frame = 0
Query: 63 GGVLVTGASTGIGRHAAFYLARQGFLVFAGVRKPADGEALLRAYLDEESKQTSKSRSRGKVSPAKQGVLHFLILDITKPFQIAAAVRSVQEELSRRGGLPFLGLVNNAGVTGGADPVEFLPLEHNRNTFEVNFYGPLAVTQAFLPLLRQAPQGRIVNVSSMAGIVTRPLGATYSCTKFALEALSDTLRVELGHLGVSVSVIQPGYIRSEIFGKADEQHQHRMQELPVECSALYGHLYTVD----KTNALIAKASDPIVCSRAIHHALTSPYPKV 332
G V+++GAS+GIG A YL + G+ VFAGVR ADGEAL K ++ +++P + LD+T I AA ++ L G GLVNNAG+ A P+EFLP+ R FE+N G +AVTQAFLPLLR++ QGRI+N+SS G V+ P +Y +KFALEAL+D LR+EL G++V +I+PG + + I+ K+ + + LP E +LY VD K N L V ++A+ HALT+ PK+
Sbjct: 9 GSVVISGASSGIGEACAIYLDKLGYQVFAGVRSDADGEAL-------------KCKTSERLTP--------IFLDVTNEVSIIAAANRIKATLDSTG---LTGLVNNAGIVI-AGPLEFLPVADLREQFEINVIGQIAVTQAFLPLLRES-QGRIINMSSDNGKVSIPFLGSYCASKFALEALTDALRIELQPWGIAVCIIEPGSVTTPIWKKSISKADNIWNNLPPEARSLYSVF--VDSAHKKANELSNNGFPAEVVAKAVAHALTTKRPKI 254 The following BLAST results are available for this feature:
BLAST of EWM28977.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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