EWM28981.1, cds1691 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28981.1 vs. NCBI_GenBank
Match: gi|585111475|gb|EWM28981.1| (heat shock protein atpase subunit [Nannochloropsis gaditana]) HSP 1 Score: 522.702 bits (1345), Expect = 0.000e+0 Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 0
Query: 1 MLPRVFQRTRVSFTSAIPTLSRRVVGSCPLAASSQRNNREEVNTTTRKPYATSVSKEATRHAHAPVDDTATSTTSAGAAGVSGVCDDPGKSNSQLSSDSFPEDIVAHLDKYVIGQEEAKKATAIAMRMRWRRNQLPEDLRAEVTPSNILMKGPTGTGKTEIARRLSALAEAPFIKVEATRYTEVGFVGANTSDMIKGLLDNAVRLERELEKKNVAAEAHAKAETKVLDLLKLGNPKGLSSEQQQDLRSREGGELR 255
MLPRVFQRTRVSFTSAIPTLSRRVVGSCPLAASSQRNNREEVNTTTRKPYATSVSKEATRHAHAPVDDTATSTTSAGAAGVSGVCDDPGKSNSQLSSDSFPEDIVAHLDKYVIGQEEAKKATAIAMRMRWRRNQLPEDLRAEVTPSNILMKGPTGTGKTEIARRLSALAEAPFIKVEATRYTEVGFVGANTSDMIKGLLDNAVRLERELEKKNVAAEAHAKAETKVLDLLKLGNPKGLSSEQQQDLRSREGGELR
Sbjct: 1 MLPRVFQRTRVSFTSAIPTLSRRVVGSCPLAASSQRNNREEVNTTTRKPYATSVSKEATRHAHAPVDDTATSTTSAGAAGVSGVCDDPGKSNSQLSSDSFPEDIVAHLDKYVIGQEEAKKATAIAMRMRWRRNQLPEDLRAEVTPSNILMKGPTGTGKTEIARRLSALAEAPFIKVEATRYTEVGFVGANTSDMIKGLLDNAVRLERELEKKNVAAEAHAKAETKVLDLLKLGNPKGLSSEQQQDLRSREGGELR 255
BLAST of EWM28981.1 vs. NCBI_GenBank
Match: gi|553194463|ref|XP_005855961.1| (heat shock protein atpase subunit, partial [Nannochloropsis gaditana CCMP526] >gi|422293104|gb|EKU20404.1| heat shock protein atpase subunit, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 499.204 bits (1284), Expect = 1.269e-177 Identity = 248/255 (97.25%), Postives = 248/255 (97.25%), Query Frame = 0
Query: 1 MLPRVFQRTRVSFTSAIPTLSRRVVGSCPLAASSQRNNREEVNTTTRKPYATSVSKEATRHAHAPVDDTATSTTSAGAAGVSGVCDDPGKSNSQLSSDSFPEDIVAHLDKYVIGQEEAKKATAIAMRMRWRRNQLPEDLRAEVTPSNILMKGPTGTGKTEIARRLSALAEAPFIKVEATRYTEVGFVGANTSDMIKGLLDNAVRLERELEKKNVAAEAHAKAETKVLDLLKLGNPKGLSSEQQQDLRSR-EGGEL 254
MLPRVFQRTRVSFTSAIPT RRVVGSCPLAASSQ NREEVNTTTRKPYATSVSKEATRHAHAPVDDTATSTTSAGAAGVSGVCDDPGKSNSQLSSDSFPEDIVAHLDKYVIGQEEAKKATAIAMRMRWRRNQLPEDLRAEVTPSNILMKGPTGTGKTEIARRLSALAEAPFIKVEATRYTEVGFVGANTSDMIKGLLDNAVRLERELEKKNVAAEAHAKAETKVLDLLKLGNPKGLSSEQQQDLRSR GGE
Sbjct: 1 MLPRVFQRTRVSFTSAIPTPPRRVVGSCPLAASSQSVNREEVNTTTRKPYATSVSKEATRHAHAPVDDTATSTTSAGAAGVSGVCDDPGKSNSQLSSDSFPEDIVAHLDKYVIGQEEAKKATAIAMRMRWRRNQLPEDLRAEVTPSNILMKGPTGTGKTEIARRLSALAEAPFIKVEATRYTEVGFVGANTSDMIKGLLDNAVRLERELEKKNVAAEAHAKAETKVLDLLKLGNPKGLSSEQQQDLRSRLRGGEF 255
BLAST of EWM28981.1 vs. NCBI_GenBank
Match: gi|1200546710|gb|OUW58629.1| (HslU--HslV peptidase ATPase subunit [Pelagibacteraceae bacterium TMED197]) HSP 1 Score: 173.711 bits (439), Expect = 7.793e-48 Identity = 91/168 (54.17%), Postives = 122/168 (72.62%), Query Frame = 0
Query: 84 VCDDPGKSNSQLSSDSFPEDIVAHLDKYVIGQEEAKKATAIAMRMRWRRNQLPEDLRAEVTPSNILMKGPTGTGKTEIARRLSALAEAPFIKVEATRYTEVGFVGANTSDMIKGLLDNAVRLERELEKKNVAAEAHAKAETKVLDLLKLGNPKGLSSEQQQDLRSREG 251
V + K S++S+ S P +IV+ LD+YVIGQ+EAKKA A+A+R RWRR L +++R EV P NILM GPTG GKTEI+RRLS LAEAPFIKVEATR+TEVG+VG + +I+ L++ A+ +ERE ++K V A+A KAE KVLD L +GN +++ + R R G
Sbjct: 12 VVKNKTKDXSKVSALS-PREIVSELDRYVIGQKEAKKAVAVALRNRWRRQALSDEMRDEVLPKNILMIGPTGVGKTEISRRLSKLAEAPFIKVEATRFTEVGYVGRDVEQIIRDLIEIAIAMERERKRKEVKAKAELKAEEKVLDAL-VGNKASVATRESFRKRLRNG 177
BLAST of EWM28981.1 vs. NCBI_GenBank
Match: gi|1200612010|gb|OUX21034.1| (HslU--HslV peptidase ATPase subunit [Pelagibacteraceae bacterium TMED253]) HSP 1 Score: 172.94 bits (437), Expect = 1.307e-47 Identity = 89/162 (54.94%), Postives = 122/162 (75.31%), Query Frame = 0
Query: 90 KSNSQLSSDSFPEDIVAHLDKYVIGQEEAKKATAIAMRMRWRRNQLPEDLRAEVTPSNILMKGPTGTGKTEIARRLSALAEAPFIKVEATRYTEVGFVGANTSDMIKGLLDNAVRLERELEKKNVAAEAHAKAETKVLDLLKLGNPKGLSSEQQQDLRSREG 251
K +S++S+ S P +IV+ LD+YVIGQ+EAKKA A+A+R RWRR L +++R EV P NILM GPTG GKTEI+RRLS LAEAPFIKVEATR+TEVG+VG + +++ L++ A+ +ERE ++K V A+A KAE KVLD L +GN +++++ R R G
Sbjct: 18 KKSSKVSALS-PREIVSELDRYVIGQKEAKKAVAVALRNRWRRQALSDEMRDEVLPKNILMIGPTGVGKTEISRRLSKLAEAPFIKVEATRFTEVGYVGRDVEQIVRDLIEIAIAMEREKKRKEVKAKAELKAEDKVLDAL-VGNKASVATKESFRKRLRNG 177
BLAST of EWM28981.1 vs. NCBI_GenBank
Match: gi|1129587001|ref|WP_075534202.1| (HslU--HslV peptidase ATPase subunit [Candidatus Pelagibacter ubique]) HSP 1 Score: 172.555 bits (436), Expect = 1.994e-47 Identity = 89/160 (55.62%), Postives = 120/160 (75.00%), Query Frame = 0
Query: 92 NSQLSSDSFPEDIVAHLDKYVIGQEEAKKATAIAMRMRWRRNQLPEDLRAEVTPSNILMKGPTGTGKTEIARRLSALAEAPFIKVEATRYTEVGFVGANTSDMIKGLLDNAVRLERELEKKNVAAEAHAKAETKVLDLLKLGNPKGLSSEQQQDLRSREG 251
NS++S+ S P +IV+ LD+YVIGQ+EAKKA A+A+R RWRR L +++R EV P NILM GPTG GKTEI+RRLS LAEAPFIKVEATR+TEVG+VG + +++ L++ A+ +ERE ++K V A+A KAE KVLD L +GN +++ + R R G
Sbjct: 20 NSKVSALS-PREIVSELDRYVIGQKEAKKAVAVALRNRWRRQALTDEMRDEVLPKNILMIGPTGVGKTEISRRLSRLAEAPFIKVEATRFTEVGYVGRDVEQIVRDLIEIAIAMERERKRKEVKAKAELKAEEKVLDAL-VGNKASVATRESFRKRLRNG 177
BLAST of EWM28981.1 vs. NCBI_GenBank
Match: gi|939227480|gb|KPU81987.1| (ATP-dependent protease [SAR11 cluster bacterium PRT-SC02]) HSP 1 Score: 172.555 bits (436), Expect = 2.415e-47 Identity = 90/162 (55.56%), Postives = 119/162 (73.46%), Query Frame = 0
Query: 90 KSNSQLSSDSFPEDIVAHLDKYVIGQEEAKKATAIAMRMRWRRNQLPEDLRAEVTPSNILMKGPTGTGKTEIARRLSALAEAPFIKVEATRYTEVGFVGANTSDMIKGLLDNAVRLERELEKKNVAAEAHAKAETKVLDLLKLGNPKGLSSEQQQDLRSREG 251
K S++S+ S P +IV+ LD+YVIGQ+EAKKA A+A+R RWRR L E++R EV P NILM GPTG GKTEI+RRLS LAEAPFIKVEATR+TEVG+VG + +I+ L++ A+ +ERE ++K V A+A AE KVLD L +GN +++ + R R G
Sbjct: 17 KKESKVSALS-PREIVSELDRYVIGQKEAKKAVAVALRNRWRRQALSEEMRDEVLPKNILMIGPTGVGKTEISRRLSKLAEAPFIKVEATRFTEVGYVGRDVEQIIRDLIEIAIAMEREKKRKEVNAKAQQMAEEKVLDAL-VGNKASVATRESFRKRLRNG 176
BLAST of EWM28981.1 vs. NCBI_GenBank
Match: gi|1200619010|gb|OUX27644.1| (HslU--HslV peptidase ATPase subunit [Rickettsiales bacterium TMED254]) HSP 1 Score: 172.17 bits (435), Expect = 2.912e-47 Identity = 90/168 (53.57%), Postives = 121/168 (72.02%), Query Frame = 0
Query: 84 VCDDPGKSNSQLSSDSFPEDIVAHLDKYVIGQEEAKKATAIAMRMRWRRNQLPEDLRAEVTPSNILMKGPTGTGKTEIARRLSALAEAPFIKVEATRYTEVGFVGANTSDMIKGLLDNAVRLERELEKKNVAAEAHAKAETKVLDLLKLGNPKGLSSEQQQDLRSREG 251
+ D K+ S++S+ S P +IV+ LD+YVIGQ+EAKKA A+A+R RWRR L D++ EV P NILM GPTG GKTEI+RRLS LAEAPFIKVEATR+TEVG+VG + +I+ L++ A+ +ERE ++K V A+A AE KVLD L +GN +++ + R R G
Sbjct: 13 IKDKKNKTESRVSALS-PREIVSELDRYVIGQKEAKKAVAVALRNRWRRQALTSDMKEEVLPKNILMIGPTGVGKTEISRRLSKLAEAPFIKVEATRFTEVGYVGRDVEQIIRDLIEIAIAMEREKKRKEVNAKAQLAAEEKVLDAL-VGNKASVATRESFRKRLRNG 178
BLAST of EWM28981.1 vs. NCBI_GenBank
Match: gi|493505380|ref|WP_006459823.1| (ATP-dependent protease ATP-binding subunit HslU [Thioalkalimicrobium aerophilum] >gi|570729484|gb|AHF00704.1| ATP-dependent protease [Thioalkalimicrobium aerophilum AL3]) HSP 1 Score: 171.785 bits (434), Expect = 3.269e-47 Identity = 80/130 (61.54%), Postives = 103/130 (79.23%), Query Frame = 0
Query: 101 PEDIVAHLDKYVIGQEEAKKATAIAMRMRWRRNQLPEDLRAEVTPSNILMKGPTGTGKTEIARRLSALAEAPFIKVEATRYTEVGFVGANTSDMIKGLLDNAVRLERELEKKNVAAEAHAKAETKVLDLL 230
P++IV LDK++IGQ++AKKA AIA+R RWRR QLP+DLR EVTP NILM GPTG GKTEIARRL+ LA APFIKVEAT++TEVG+VG + +I+ L+DNAV+++RE + V A AE ++LD+L
Sbjct: 4 PKEIVHELDKHIIGQDDAKKAVAIALRNRWRRMQLPKDLRTEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGRDVDSIIRDLVDNAVKMQREHAVQKVKTRAEDAAEERILDIL 133
BLAST of EWM28981.1 vs. NCBI_GenBank
Match: gi|499689091|ref|WP_011369825.1| (ATP-dependent protease ATP-binding subunit HslU [Thiomicrospira crunogena] >gi|78363035|gb|ABB41000.1| ATP-dependent hsl protease ATP-binding subunit HslU [Thiomicrospira crunogena XCL-2]) HSP 1 Score: 171.4 bits (433), Expect = 3.910e-47 Identity = 81/130 (62.31%), Postives = 101/130 (77.69%), Query Frame = 0
Query: 101 PEDIVAHLDKYVIGQEEAKKATAIAMRMRWRRNQLPEDLRAEVTPSNILMKGPTGTGKTEIARRLSALAEAPFIKVEATRYTEVGFVGANTSDMIKGLLDNAVRLERELEKKNVAAEAHAKAETKVLDLL 230
P++IV LD Y++GQ EAKK+ AIA+R RWRR QLPE+LR EVTP NILM GPTG GKTEIARRL+ LA APFIKVEAT+YTEVG+VG +IK L++NA++++RE K V +A AE K+LD+L
Sbjct: 4 PKEIVHELDSYIVGQAEAKKSVAIALRNRWRRMQLPEELRQEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKYTEVGYVGREVDSIIKDLVENAIKMQREQAMKGVKNKAQDLAEEKILDIL 133
BLAST of EWM28981.1 vs. NCBI_GenBank
Match: gi|522079239|ref|WP_020590448.1| (ATP-dependent protease ATP-binding subunit HslU [Kiloniella laminariae]) HSP 1 Score: 171.4 bits (433), Expect = 5.186e-47 Identity = 86/153 (56.21%), Postives = 114/153 (74.51%), Query Frame = 0
Query: 101 PEDIVAHLDKYVIGQEEAKKATAIAMRMRWRRNQLPEDLRAEVTPSNILMKGPTGTGKTEIARRLSALAEAPFIKVEATRYTEVGFVGANTSDMIKGLLDNAVRLERELEKKNVAAEAHAKAETKVLDLLKLGNPKGLSSEQQQDLRS--REG 251
P +IV+ LD+Y++GQ EAK+A AIA+R RWRR QLPE++R EV P NILM GPTG GKTEIARRL+ LA APF+KVEAT++TEVG+VG + +I+ L+D ++ L RE ++K+V A+A AE +VLD L +G +G S E +Q R REG
Sbjct: 14 PREIVSELDRYIVGQNEAKRAVAIALRNRWRRQQLPEEMREEVLPKNILMIGPTGVGKTEIARRLAKLANAPFLKVEATKFTEVGYVGRDVEQIIRDLVDTSILLARENQRKSVVAKAELNAENRVLDAL-VG--EGASEETRQKFRKMLREG 163 The following BLAST results are available for this feature:
BLAST of EWM28981.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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