EWM28985.1, cds1689 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28985.1 vs. NCBI_GenBank
Match: gi|585111480|gb|EWM28985.1| (pyridoxamine 5'-phosphate oxidase-related FMN-binding protein [Nannochloropsis gaditana]) HSP 1 Score: 699.508 bits (1804), Expect = 0.000e+0 Identity = 343/343 (100.00%), Postives = 343/343 (100.00%), Query Frame = 0 Query: 1 MPNFNMVREPTDGISTRHGMALLFLLTTAVAAAGGAGVVLLLQQRGALSSPHPLPPPSPHKKDRGKKHHTPVGSPSKSNMVSDPVEGKEDIFPPLPPTVVALLQSTRVCHLSTASTDGLPHLSLMRFTYRREEEVIIMTTRTDTKKYELLCSMPKVAVLVHDFPSLRDEEDKEEDKKEEEEKEVRSDIGDRAGEVSAKFRGNAFCGHGKGEKGGGVGGNEDGGEGGSKRPHRHEKEDGKGGGGKGKEGGDGDGHTYAITLNGVARMETGEEAERYRSLHLKNNVAYSQFIEGPGIAVFTVHVMSARICNVKDRVTYWDKRTATVEEGVRREEKGEGRGKRQEE 343 MPNFNMVREPTDGISTRHGMALLFLLTTAVAAAGGAGVVLLLQQRGALSSPHPLPPPSPHKKDRGKKHHTPVGSPSKSNMVSDPVEGKEDIFPPLPPTVVALLQSTRVCHLSTASTDGLPHLSLMRFTYRREEEVIIMTTRTDTKKYELLCSMPKVAVLVHDFPSLRDEEDKEEDKKEEEEKEVRSDIGDRAGEVSAKFRGNAFCGHGKGEKGGGVGGNEDGGEGGSKRPHRHEKEDGKGGGGKGKEGGDGDGHTYAITLNGVARMETGEEAERYRSLHLKNNVAYSQFIEGPGIAVFTVHVMSARICNVKDRVTYWDKRTATVEEGVRREEKGEGRGKRQEE Sbjct: 1 MPNFNMVREPTDGISTRHGMALLFLLTTAVAAAGGAGVVLLLQQRGALSSPHPLPPPSPHKKDRGKKHHTPVGSPSKSNMVSDPVEGKEDIFPPLPPTVVALLQSTRVCHLSTASTDGLPHLSLMRFTYRREEEVIIMTTRTDTKKYELLCSMPKVAVLVHDFPSLRDEEDKEEDKKEEEEKEVRSDIGDRAGEVSAKFRGNAFCGHGKGEKGGGVGGNEDGGEGGSKRPHRHEKEDGKGGGGKGKEGGDGDGHTYAITLNGVARMETGEEAERYRSLHLKNNVAYSQFIEGPGIAVFTVHVMSARICNVKDRVTYWDKRTATVEEGVRREEKGEGRGKRQEE 343
BLAST of EWM28985.1 vs. NCBI_GenBank
Match: gi|553194473|ref|XP_005855963.1| (pyridoxamine phosphate [Nannochloropsis gaditana CCMP526] >gi|422293106|gb|EKU20406.1| pyridoxamine phosphate [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 169.088 bits (427), Expect = 1.322e-47 Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0 Query: 80 MVSDPVEGKEDIFPPLPPTVVALLQSTRVCHLSTASTDGLPHLSLMRFTYRREEEVIIMTTRTDTKKYELLCSMPKVAVL 159 MVSDPVEGKEDIFPPLPPTVVALLQSTRVCHLSTASTDGLPHLSLMRFTYRREEEVIIMTTRTDTKKYELLCSMPKVAVL Sbjct: 1 MVSDPVEGKEDIFPPLPPTVVALLQSTRVCHLSTASTDGLPHLSLMRFTYRREEEVIIMTTRTDTKKYELLCSMPKVAVL 80
BLAST of EWM28985.1 vs. NCBI_GenBank
Match: gi|299473450|emb|CBN77847.1| (pyridoxamine 5'-phosphate oxidase-related FMN-binding [Ectocarpus siliculosus]) HSP 1 Score: 91.2781 bits (225), Expect = 1.451e-17 Identity = 44/77 (57.14%), Postives = 58/77 (75.32%), Query Frame = 0 Query: 88 KEDIFPPLPPTVVALLQSTRVCHLSTASTDGLPHLSLMRFTYRREEEVIIMTTRTDTKKYELLCSMPKVAVLVHDFP 164 + D+ PPLP VV LLQ++R+C LST S D PHLSLM FTY +EVII++TR DTKK++L+ + VA+LVH+FP Sbjct: 101 QADMTPPLPDDVVRLLQASRLCFLSTFSNDH-PHLSLMNFTYHHTDEVIILSTRRDTKKFQLVQTGRNVALLVHEFP 176 HSP 2 Score: 79.337 bits (194), Expect = 2.546e-13 Identity = 36/61 (59.02%), Postives = 43/61 (70.49%), Query Frame = 0 Query: 258 ITLNGVARMETGEEAERYRSLHLKNNVAYSQFIEGPGIAVFTVHVMSARICNVKDRVTYWD 318 ITLNG A ++ GE+AERYR LH + N FI GP IA+ TV V SARICNV+D VT W+ Sbjct: 205 ITLNGTATIQEGEQAERYRDLHARKNPNSKTFIFGPNIAIITVRVRSARICNVRDEVTVWN 265
BLAST of EWM28985.1 vs. NCBI_GenBank
Match: gi|551668664|ref|XP_005837091.1| (hypothetical protein GUITHDRAFT_135304 [Guillardia theta CCMP2712] >gi|428181247|gb|EKX50111.1| hypothetical protein GUITHDRAFT_135304 [Guillardia theta CCMP2712]) HSP 1 Score: 89.3521 bits (220), Expect = 1.540e-17 Identity = 49/122 (40.16%), Postives = 65/122 (53.28%), Query Frame = 0 Query: 86 EGKEDIFPPLPPTVVALLQSTRVCHLSTASTDGLPHLSLMRFTYRREEE-VIIMTTRTDTKKYELLCSMPKVAVLVHDFPSLRDEEDKEEDKKEEEEKEVRSDIGDRAGEVSAKFRGNAFCG 206 + +E PPLPP V +L S +CHLS PH SLM FT+ EEE +IIMTTR DTKKY LL P V++LVHDFP + +K + E + G+ ++ K + C Sbjct: 54 DNEESYTPPLPPEVKEMLTSASLCHLSCNDKGDAPHTSLMNFTFVPEEEDLIIMTTRKDTKKYRLLSQRPDVSLLVHDFPQISRYRQIHLEKNRQYENFIE---GEDKAVITVKVQRARMCN 172 HSP 2 Score: 60.077 bits (144), Expect = 3.777e-7 Identity = 26/48 (54.17%), Postives = 32/48 (66.67%), Query Frame = 0 Query: 271 EAERYRSLHLKNNVAYSQFIEGPGIAVFTVHVMSARICNVKDRVTYWD 318 + RYR +HL+ N Y FIEG AV TV V AR+CNVKD+VT W+ Sbjct: 134 QISRYRQIHLEKNRQYENFIEGEDKAVITVKVQRARMCNVKDQVTTWE 181
BLAST of EWM28985.1 vs. NCBI_GenBank
Match: gi|551556514|ref|XP_005765376.1| (hypothetical protein EMIHUDRAFT_104086 [Emiliania huxleyi CCMP1516] >gi|485615324|gb|EOD12947.1| hypothetical protein EMIHUDRAFT_104086 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 80.4925 bits (197), Expect = 6.963e-14 Identity = 34/65 (52.31%), Postives = 53/65 (81.54%), Query Frame = 0 Query: 256 YAITLNGVARMETGEEAERYRSLHLKNNVAYSQFIEGPGIAVFTVHVMSARICNVKDRVTYWDKR 320 ++ITL+GV R E+GE AERYR++HL+ N AY+QFI G IA+ TV + +AR+C+V DRV++++++ Sbjct: 167 HSITLSGVVREESGEMAERYRAIHLEKNQAYAQFIVGDDIAILTVEIETARVCDVNDRVSHFERQ 231 HSP 2 Score: 75.485 bits (184), Expect = 3.308e-12 Identity = 40/81 (49.38%), Postives = 51/81 (62.96%), Query Frame = 0 Query: 90 DIFPPLPPTVVALLQSTRVCHLSTASTDGLPHLSLMRFTYRRE-------EEVIIMTTRTDTKKYELLCSMPKVAVLVHDF 163 D PPLP VV +L +C L+T+S D PHLSLMRF++ R EV+I++TR TKKY LC+ VA+LVHDF Sbjct: 68 DFTPPLPEPVVQVLTRCCLCFLATSSGDS-PHLSLMRFSFSRSLAAQRPGAEVLIVSTRRSTKKYATLCANRNVALLVHDF 147
BLAST of EWM28985.1 vs. NCBI_GenBank
Match: gi|551580414|ref|XP_005775748.1| (hypothetical protein EMIHUDRAFT_239777 [Emiliania huxleyi CCMP1516] >gi|485627727|gb|EOD23319.1| hypothetical protein EMIHUDRAFT_239777 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 79.337 bits (194), Expect = 1.862e-13 Identity = 34/65 (52.31%), Postives = 52/65 (80.00%), Query Frame = 0 Query: 256 YAITLNGVARMETGEEAERYRSLHLKNNVAYSQFIEGPGIAVFTVHVMSARICNVKDRVTYWDKR 320 ++ITL+GV R E GE AERYR++HL+ N AY+QFI G IA+ TV + +AR+C+V DRV++++++ Sbjct: 167 HSITLSGVVREERGEMAERYRAIHLEKNQAYAQFIVGDDIAILTVEIETARVCDVNDRVSHFERQ 231 HSP 2 Score: 75.485 bits (184), Expect = 3.542e-12 Identity = 40/81 (49.38%), Postives = 51/81 (62.96%), Query Frame = 0 Query: 90 DIFPPLPPTVVALLQSTRVCHLSTASTDGLPHLSLMRFTYRRE-------EEVIIMTTRTDTKKYELLCSMPKVAVLVHDF 163 D PPLP VV +L +C L+T+S D PHLSLMRF++ R EV+I++TR TKKY LC+ VA+LVHDF Sbjct: 68 DFTPPLPEPVVQVLTRCCLCFLATSSGDS-PHLSLMRFSFSRSLAAQRPGAEVLIVSTRRSTKKYATLCANRNVALLVHDF 147
BLAST of EWM28985.1 vs. NCBI_GenBank
Match: gi|929773410|ref|XP_014161638.1| (hypothetical protein SARC_00170 [Sphaeroforma arctica JP610] >gi|906959766|gb|KNC87736.1| hypothetical protein SARC_00170 [Sphaeroforma arctica JP610]) HSP 1 Score: 73.1738 bits (178), Expect = 2.067e-11 Identity = 36/76 (47.37%), Postives = 54/76 (71.05%), Query Frame = 0 Query: 88 KEDIFPPLPPTVVALLQSTRVCHLSTASTDGLPHLSLMRFTYRREEEVIIMTTRTDTKKY-ELLCSMPKVAVLVHD 162 +E PPLP VV +L+++ + +L+T + +G PHLSLM FTY +E+E I+++TR DTKK LL S V++L+HD Sbjct: 74 EESFSPPLPSVVVNVLKTSGLSYLATVNAEGEPHLSLMAFTYVQEDEKIVLSTRRDTKKANNLLVSGGIVSLLIHD 149 HSP 2 Score: 72.7886 bits (177), Expect = 3.522e-11 Identity = 36/71 (50.70%), Postives = 46/71 (64.79%), Query Frame = 0 Query: 255 TYAITLNGVARMETGEEAERYRSLHLKNNVAYSQFIEGPGIAVFTVHVMSARICNVKDRVTYWDKRTATVE 325 T +ITL G A +E+GE AERYR+ HL+NN + FI G IA+ TV V+ A ICN KD+V W + T E Sbjct: 170 TCSITLVGEASVESGERAERYRAKHLENNPKGAVFINGDNIAIVTVKVLEASICNSKDKVKRWTASSGTTE 240
BLAST of EWM28985.1 vs. NCBI_GenBank
Match: gi|1147428387|ref|XP_020074356.1| (hypothetical protein HYPBUDRAFT_163527 [Hyphopichia burtonii NRRL Y-1933] >gi|1064975162|gb|ODV65289.1| hypothetical protein HYPBUDRAFT_163527 [Hyphopichia burtonii NRRL Y-1933]) HSP 1 Score: 72.0182 bits (175), Expect = 2.179e-11 Identity = 52/155 (33.55%), Postives = 75/155 (48.39%), Query Frame = 0 Query: 95 LPPTVVALLQSTRVCHLSTASTDGLPHLSLMRFTY--RREEEVIIMTTRTDTKKYELLCSMPKVAVLVHDFPSLRDEEDKEED----KKEEEEKEVRSDIG-DRAGEVSAKFRGNA--FCGHGKGEKGG---GVGGNEDGGEGGSKRPHRHEKED 237 LP +VV LL+STR HL+T D PH+SLM +TY + E II T+ T KYE + S P V++LVHD+ S R+ ++ D K+ E+ +++ VS G A H EK + N D + + + E ED Sbjct: 7 LPDSVVKLLKSTRFVHLATCK-DNFPHVSLMNYTYYSKENEYYIITTSPKKTTKYENIISNPNVSLLVHDWISARNPDESTSDSVANKRRNSLYELLTNLNKSEISSVSVMINGKAEILSPHTDLEKFNFFKSLHLNNDSIDAIQSKNYI-ESED 159
BLAST of EWM28985.1 vs. NCBI_GenBank
Match: gi|1205210511|gb|OWB56986.1| (hypothetical protein B5S28_g2907 [[Candida] boidinii] >gi|1205216393|gb|OWB62868.1| hypothetical protein B5S29_g3816 [[Candida] boidinii] >gi|1205226572|gb|OWB73046.1| hypothetical protein B5S31_g2778 [[Candida] boidinii] >gi|1205232259|gb|OWB78732.1| hypothetical protein B5S32_g2932 [[Candida] boidinii]) HSP 1 Score: 71.633 bits (174), Expect = 3.515e-11 Identity = 54/237 (22.78%), Postives = 95/237 (40.08%), Query Frame = 0 Query: 94 PLPPTVVALLQSTRVCHLSTASTDGLPHLSLMRFTYRREEEV-------------IIMTTRTDTKKYELLCSMPKVAVLVHDFPSLRDEEDKEEDKKEEEEKEVRSDIGDRAGEVSAKFRGNAFCGHGKGEKGGGVGGNEDGGEGGSKRPHRHEKEDGKGGGGKGKEGGDGDGHTYAITLNGVARMETGEEAERYRSLHLKNNVAYSQFIEGPGIAVFTVHVMSARICNVKDRVTYW 317 PLP V+ L++S++ HL T S D +PH+SLM +T+ E+V I++TT T+KYE + S V+VL+HD+ S +D++ + E++ +S+I + N G NED EE Y++LHL N + FI+G +A+ + + ++++ + + V + Sbjct: 10 PLPENVLTLIKSSKFLHLGT-SKDNIPHVSLMNYTFVPSEKVFNSSESSSTSAPLIVVTTHKKTQKYENINSNSNVSVLIHDWISAASNDDEKSSELINNEEDCKSNILKLLQNI----NQNEISSLSVTLSGSAKILNED-----------------------------------------------NEERLYYKNLHLNKNPSAKVFIDGDDVAIILIQITASKVADSDNNVASY 194
BLAST of EWM28985.1 vs. NCBI_GenBank
Match: gi|598069173|ref|XP_007375415.1| (hypothetical protein SPAPADRAFT_61222 [Spathaspora passalidarum NRRL Y-27907] >gi|344301834|gb|EGW32139.1| hypothetical protein SPAPADRAFT_61222 [Spathaspora passalidarum NRRL Y-27907]) HSP 1 Score: 71.2478 bits (173), Expect = 4.092e-11 Identity = 33/82 (40.24%), Postives = 59/82 (71.95%), Query Frame = 0 Query: 95 LPPTVVALLQSTRVCHLSTASTDGLPHLSLMRFTYRRE--EEVIIMTTRTDTKKYELLCSMPKVAVLVHDFPSLRDEEDKEE 174 LP +V++LL+S+R HL+T D PH+SLM +T+ ++ +++II++T T T KY+ + S P V++L+HD+ S++D + +E Sbjct: 7 LPDSVLSLLKSSRFIHLATCLNDK-PHVSLMNYTFCQQGDKQIIIISTPTRTTKYQNMLSNPNVSILIHDWISVKDTTESKE 87 The following BLAST results are available for this feature:
BLAST of EWM28985.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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