EWM28987.1, cds1687 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28987.1 vs. NCBI_GenBank
Match: gi|585111482|gb|EWM28987.1| (hypothetical protein Naga_100501g4 [Nannochloropsis gaditana]) HSP 1 Score: 398.667 bits (1023), Expect = 1.317e-140 Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0
Query: 1 MHSPMQKSWLSIALILACMTTPSAFLLAPPTTHLVKHYQGSTRLSASIYEDVNTAVKQAMKDKDKEKLSALRNIKSALGNALKEEGAAETLPDEKAILILTKLRKQRQESIEMFIKGNRDDMVQAEKAELAILETYLPQLADEATTREWVSAAIQETGASAKSDMGKVMGVMMKRYKGKTDNKLVSKLVGEMLGA 195
MHSPMQKSWLSIALILACMTTPSAFLLAPPTTHLVKHYQGSTRLSASIYEDVNTAVKQAMKDKDKEKLSALRNIKSALGNALKEEGAAETLPDEKAILILTKLRKQRQESIEMFIKGNRDDMVQAEKAELAILETYLPQLADEATTREWVSAAIQETGASAKSDMGKVMGVMMKRYKGKTDNKLVSKLVGEMLGA
Sbjct: 1 MHSPMQKSWLSIALILACMTTPSAFLLAPPTTHLVKHYQGSTRLSASIYEDVNTAVKQAMKDKDKEKLSALRNIKSALGNALKEEGAAETLPDEKAILILTKLRKQRQESIEMFIKGNRDDMVQAEKAELAILETYLPQLADEATTREWVSAAIQETGASAKSDMGKVMGVMMKRYKGKTDNKLVSKLVGEMLGA 195
BLAST of EWM28987.1 vs. NCBI_GenBank
Match: gi|553194450|ref|XP_005855957.1| (hypothetical protein NGA_0547000 [Nannochloropsis gaditana CCMP526] >gi|422293100|gb|EKU20400.1| hypothetical protein NGA_0547000 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 270.011 bits (689), Expect = 1.363e-90 Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 0
Query: 60 MKDKDKEKLSALRNIKSALGNALKEEGAAETLPDEKAILILTKLRKQRQESIEMFIKGNRDDMVQAEKAELAILETYLPQLADEATTREWVSAAIQETGASAKSDMGKVMGVMMKRYKGKTDNKLVSKLVGEMLGA 195
MKDKDKEKLSALRNIKSALGNALKEEGAAETLPDEKAILILTKLRKQRQESIEMFIKGNRDDMVQAEKAELAILETYLPQLADEATTREWVSAAIQETGASAKSD+GKVMGVMMKRYKGKTDNKLVSKLVGEMLGA
Sbjct: 1 MKDKDKEKLSALRNIKSALGNALKEEGAAETLPDEKAILILTKLRKQRQESIEMFIKGNRDDMVQAEKAELAILETYLPQLADEATTREWVSAAIQETGASAKSDVGKVMGVMMKRYKGKTDNKLVSKLVGEMLGA 136
BLAST of EWM28987.1 vs. NCBI_GenBank
Match: gi|299117470|emb|CBN73973.1| (GatB/YqeY [Ectocarpus siliculosus]) HSP 1 Score: 144.05 bits (362), Expect = 7.767e-40 Identity = 73/153 (47.71%), Postives = 99/153 (64.71%), Query Frame = 0
Query: 41 STRLSASIYEDVNTAVKQAMKDKDKEKLSALRNIKSALGNALKEEGAAETLPDEKAILILTKLRKQRQESIEMFIKGNRDDMVQAEKAELAILETYLPQLADEATTREWVSAAIQETGASAKSDMGKVMGVMMKRYKGKTDNKLVSKLVGEML 193
ST LS +++DV +K +MK DK KL LR +++A K G+ + LPDEK I IL K+ KQ+QESI+M+ KG RDD+V+ E +++ LPQLADEATT++WV AI GA SDMGKVMG++MK +K + D L +LV L
Sbjct: 56 STSLSMGVFDDVTAEMKASMKSGDKPKLEGLRMVRAAFLTETKAAGSGDKLPDEKCIAILRKMSKQQQESIDMYRKGKRDDLVEKETKTKQLIDAMLPQLADEATTQKWVDEAIASAGAKGPSDMGKVMGLLMKAHKTEMDGGLAQRLVSAQL 208
BLAST of EWM28987.1 vs. NCBI_GenBank
Match: gi|1189387075|gb|OSX74155.1| (hypothetical protein BU14_0306s0033 [Porphyra umbilicalis]) HSP 1 Score: 133.65 bits (335), Expect = 1.635e-36 Identity = 72/149 (48.32%), Postives = 96/149 (64.43%), Query Frame = 0
Query: 47 SIYEDVNTAVKQAMKDKDKEKLSALRNIKSALGNALKEEGAAETLPDEKAILILTKLRKQRQESIEMFIKGNRDDMVQAEKAELAILETYLPQLADEATTREWVSAAIQETGASAKSDMGKVMGVMMKRYKGKTDNKLVSKLVGEMLGA 195
I DV +K AMK KD + L LRN+++A A KE GA +TL D A+ L +L KQR +SIEM+ G R D+ +AEK EL++++TYLP ADEATTR WV AI GA+ D+GKVMG +MK ++ + D LV K+ E+L A
Sbjct: 2 GIATDVTERMKVAMKAKDADTLRVLRNMRAAFLTAQKETGA-DTLDDAAAVACLKRLVKQRNQSIEMYETGGRTDLAEAEKFELSLIQTYLPSTADEATTRGWVEEAIAAIGATKPGDVGKVMGAVMKGHRSEVDGALVKKVAAELLSA 149
BLAST of EWM28987.1 vs. NCBI_GenBank
Match: gi|1084665466|gb|OGP13484.1| (aspartyl-tRNA amidotransferase [Deltaproteobacteria bacterium GWA2_54_12]) HSP 1 Score: 126.716 bits (317), Expect = 7.028e-34 Identity = 68/148 (45.95%), Postives = 97/148 (65.54%), Query Frame = 0
Query: 47 SIYEDVNTAVKQAMKDKDKEKLSALRNIKSALGNALKEEGAAETLPDEKAILILTKLRKQRQESIEMFIKGNRDDMVQAEKAELAILETYLPQLADEATTREWVSAAIQETGASAKSDMGKVMGVMMKRYKGKTDNKLVSKLVGEMLG 194
S+ +D++ + AMK DKE+LS +R + SA+ KE A L DE+ I +++ L KQRQ+SIE F KGNR D+V+ E EL +L TYLP EA R+ + A+ ETGA+ + DMGK+M V+M + KGK D K+V+ +V E+LG
Sbjct: 2 SLRQDIHKDIAVAMKSGDKERLSTVRMLMSAI--KYKEVDAHRELTDEETIAVISSLVKQRQDSIEQFTKGNRLDLVEKESKELEVLRTYLPPQLSEAEVRDIIKKAVAETGATGQKDMGKLMKVVMPQVKGKADGKMVNDIVKELLG 147
BLAST of EWM28987.1 vs. NCBI_GenBank
Match: gi|1084753239|gb|OGP95236.1| (aspartyl-tRNA amidotransferase [Deltaproteobacteria bacterium RBG_19FT_COMBO_56_10]) HSP 1 Score: 123.25 bits (308), Expect = 1.444e-32 Identity = 68/149 (45.64%), Postives = 97/149 (65.10%), Query Frame = 0
Query: 47 SIYEDVNTAVKQAMKDKDKEKLSALRNIKSALGNALKEEGAAETLPDEKAILILTKLRKQRQESIEMFIKGNRDDMVQAEKAELAILETYLPQLADEATTREWVSAAIQETGASAKSDMGKVMGVMMKRYKGKTDNKLVSKLVGEMLGA 195
S+ +D++ + AMK +KE+LS +R + SA+ KE A L DE+ I +++ L KQRQ+SIE F KGNR D+V+ E EL +L TYLP EA R+ + A+ ETGA+ + DMGK+M V+M + KGK D KLV+ +V E LG+
Sbjct: 2 SLRQDIHKDIAVAMKAGEKERLSTVRMLMSAI--KYKEVDAHRELTDEETIAVISTLVKQRQDSIEQFTKGNRLDLVEKETKELEVLRTYLPPQLSEAEVRDIIKKAVAETGATGQKDMGKLMKVIMPQVKGKADGKLVNDIVKEALGS 148
BLAST of EWM28987.1 vs. NCBI_GenBank
Match: gi|494769541|ref|WP_007504949.1| (hypothetical protein [Caldalkalibacillus thermarum] >gi|334180035|gb|EGL82662.1| hypothetical protein CathTA2_1818 [Caldalkalibacillus thermarum TA2.A1]) HSP 1 Score: 120.939 bits (302), Expect = 1.208e-31 Identity = 66/148 (44.59%), Postives = 98/148 (66.22%), Query Frame = 0
Query: 47 SIYEDVNTAVKQAMKDKDKEKLSALRNIKSALGNALKEEGAAETLPDEKAILILTKLRKQRQESIEMFIKGNRDDMVQAEKAELAILETYLPQLADEATTREWVSAAIQETGASAKSDMGKVMGVMMKRYKGKTDNKLVSKLVGEMLG 194
S+ + +N +KQAMK+K+K +LS +R +K+AL N + G A L D+ + +L++ KQR+ES++ F K RDD+V+ E+A+LETYLP+ E R+ VS I E GA++K+DMGKVM +M + KGK D LV++LV E L
Sbjct: 2 SLVDQLNNDMKQAMKNKEKTRLSVIRMVKAALKNEEIKLGRA--LTDDDVLTVLSREMKQRKESLQEFEKAGRDDLVETLNQEIAVLETYLPEQLSEDELRQLVSDTIAEVGATSKADMGKVMSAIMPKVKGKADGSLVNRLVQEALA 147
BLAST of EWM28987.1 vs. NCBI_GenBank
Match: gi|1025826308|ref|WP_063560194.1| (hypothetical protein [Bacillus horikoshii]) HSP 1 Score: 120.939 bits (302), Expect = 1.505e-31 Identity = 66/147 (44.90%), Postives = 96/147 (65.31%), Query Frame = 0
Query: 47 SIYEDVNTAVKQAMKDKDKEKLSALRNIKSALGNALKEEGAAETLPDEKAILILTKLRKQRQESIEMFIKGNRDDMVQAEKAELAILETYLPQLADEATTREWVSAAIQETGASAKSDMGKVMGVMMKRYKGKTDNKLVSKLVGEML 193
S+ E +NT +KQAMKDKDKEKLS LR +KS++ N + G L +E+ + +L++ KQR++S++ F K R+D+V + E+AI+E Y+P+ E V I E AS+K+DMGKVMG +M + KGK D LV+KLV + L
Sbjct: 2 SLLERLNTDIKQAMKDKDKEKLSVLRMVKSSIQNESIKHG--RDLSEEEELTVLSRELKQRKDSLQEFDKAGREDLVHKLQGEIAIVEHYMPEQLSEEELSAIVQQTITEVNASSKADMGKVMGALMPKVKGKADGSLVNKLVQQHL 146
BLAST of EWM28987.1 vs. NCBI_GenBank
Match: gi|521071529|ref|WP_020403480.1| (hypothetical protein [Gracilimonas tropica]) HSP 1 Score: 120.168 bits (300), Expect = 2.740e-31 Identity = 68/151 (45.03%), Postives = 96/151 (63.58%), Query Frame = 0
Query: 47 SIYEDVNTAVKQAMKDKDKEKLSALRNIKSAL--GNALKEEGAAETLPDEKAILILTKLRKQRQESIEMFIKGNRDDMVQAEKAELAILETYLPQLADEATTREWVSAAIQETGASAKSDMGKVMGVMMKRYKGKTDNKLVSKLVGEMLGA 195
+I E + + +K+AMK K+++KL LR++K+ L + +G L DE+A+ +L K KQR+ESIE F +G R+D+ EK ELAI+E YLP++ DE R+ V I GAS D+GKVMG +M + KGK D LVSK+V E LG
Sbjct: 2 TIQEQIISDIKEAMKAKEQDKLRVLRSLKAKLMEKEISERKGGEAKLTDEQAVEVLMKAAKQRKESIEQFEEGGRNDLADNEKKELAIIEAYLPEMMDEEDVRKVVKEKIAAVGASGMQDIGKVMGPLMGQLKGKADGSLVSKVVKEELGG 152
BLAST of EWM28987.1 vs. NCBI_GenBank
Match: gi|1190746229|emb|SHE10393.1| (glutamyl-tRNA(Gln) amidotransferase subunit E [Chlamydia abortus]) HSP 1 Score: 120.168 bits (300), Expect = 2.914e-31 Identity = 65/148 (43.92%), Postives = 99/148 (66.89%), Query Frame = 0
Query: 47 SIYEDVNTAVKQAMKDKDKEKLSALRNIKSALGNALKEEGAAETLPDEKAILILTKLRKQRQESIEMFIKGNRDDMVQAEKAELAILETYLPQLADEATTREWVSAAIQETGASAKSDMGKVMGVMMKRYKGKTDNKLVSKLVGEMLG 194
S+ + +N +KQAMK +DK +LS +R I+SA+ N E +L D + + I+++ KQR++S++ F K R+D+ QA KAE+A++ YLPQ E R V IQETGAS+K++MGKVMG +M + KG+ D KLV++LV ++L
Sbjct: 2 SLSDRLNEDMKQAMKSQDKFRLSVIRMIRSAIKNI--EIDQRRSLDDNEVLDIISREIKQRKDSLQEFEKAGREDLAQAAKAEIAVIAEYLPQQLTEEEVRVLVQQTIQETGASSKAEMGKVMGALMPKVKGRADGKLVNQLVQQLLN 147 The following BLAST results are available for this feature:
BLAST of EWM28987.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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