EWM28991.1, cds1682 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28991.1 vs. NCBI_GenBank
Match: gi|585111487|gb|EWM28991.1| (nuclear protein set [Nannochloropsis gaditana]) HSP 1 Score: 290.041 bits (741), Expect = 1.698e-99 Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0
Query: 1 MLVDKVEVRYHNLYGFECRGIFAKETIKAGEMIWTYKEGTEILRTYHKHQIDALPPSPAKVNLVTYSYMLDDDLYGSTPNPEEDPSYFFNHSCAPNCWYSGDNLIVAMRDIRKDEHIVYDYAMTETEASLHAGLVCL 137
MLVDKVEVRYHNLYGFECRGIFAKETIKAGEMIWTYKEGTEILRTYHKHQIDALPPSPAKVNLVTYSYMLDDDLYGSTPNPEEDPSYFFNHSCAPNCWYSGDNLIVAMRDIRKDEHIVYDYAMTETEASLHAGLVCL
Sbjct: 1 MLVDKVEVRYHNLYGFECRGIFAKETIKAGEMIWTYKEGTEILRTYHKHQIDALPPSPAKVNLVTYSYMLDDDLYGSTPNPEEDPSYFFNHSCAPNCWYSGDNLIVAMRDIRKDEHIVYDYAMTETEASLHAGLVCL 137
BLAST of EWM28991.1 vs. NCBI_GenBank
Match: gi|857976825|emb|CEO97620.1| (hypothetical protein PBRA_000965 [Plasmodiophora brassicae]) HSP 1 Score: 160.614 bits (405), Expect = 2.005e-45 Identity = 75/136 (55.15%), Postives = 96/136 (70.59%), Query Frame = 0
Query: 1 MLVDKVEVRYHNLYGFECRGIFAKETIKAGEMIWTYKEGTEILRTYHKHQIDALPPSPAKVNLVTYSYMLDDDLYGSTPNPEEDPSYFFNHSCAPNCWYSGDNLIVAMRDIRKDEHIVYDYAMTETEASLHAGLVC 136
ML D +EVR + YGF CRG+FAK + AG +IW + +GTE + Y + QI+A P + LV +SYML DD + ST +PE DPS+FFNHSC+PN WY D IVAMRDI+ E +VYDY+ TETEASLH+G+ C
Sbjct: 1 MLPDTIEVRPFDAYGFACRGLFAKVDMPAGALIWWHDKGTEPVDVYTRTQIEA---HPQREKLVMFSYMLGDDQFSSTADPESDPSFFFNHSCSPNTWYDTDERIVAMRDIKAGEQLVYDYSFTETEASLHSGMKC 133
BLAST of EWM28991.1 vs. NCBI_GenBank
Match: gi|673030586|ref|XP_008869254.1| (hypothetical protein H310_06108 [Aphanomyces invadans] >gi|574475649|gb|ETW02649.1| hypothetical protein H310_06108 [Aphanomyces invadans]) HSP 1 Score: 149.443 bits (376), Expect = 3.254e-41 Identity = 71/137 (51.82%), Postives = 92/137 (67.15%), Query Frame = 0
Query: 1 MLVDKVEVRYHNLYGFECRGIFAKETIKAGEMIWTYKEGTEILRTYHKHQIDALPPSPAKVNLVTYSYMLDDDLYGSTPNPEEDPSYFFNHSCAPNCWYSGDNLIVAMRDIRKDEHIVYDYAMTETEASLHAGLVCL 137
ML + V+V+ N YGFEC G+FAKE + G ++W Y EG ++L TY K +I A P + L+TYSYM DD + ST NP DPS++FNHSC P CWY GD I RD++K E + YDY+ TETE+S+H GL CL
Sbjct: 1 MLTEVVQVKQFNDYGFECWGLFAKEDLPKGTLVW-YAEGHDVLDTYTKAEILA---HPQRETLITYSYMRGDDKFCSTLNPSSDPSWYFNHSCDPTCWYEGDERITTCRDVKKGEQLAYDYSCTETESSMHYGLRCL 133
BLAST of EWM28991.1 vs. NCBI_GenBank
Match: gi|698787196|ref|XP_009826630.1| (hypothetical protein H257_03987 [Aphanomyces astaci] >gi|574117719|gb|ETV83200.1| hypothetical protein H257_03987 [Aphanomyces astaci]) HSP 1 Score: 148.673 bits (374), Expect = 6.520e-41 Identity = 70/137 (51.09%), Postives = 92/137 (67.15%), Query Frame = 0
Query: 1 MLVDKVEVRYHNLYGFECRGIFAKETIKAGEMIWTYKEGTEILRTYHKHQIDALPPSPAKVNLVTYSYMLDDDLYGSTPNPEEDPSYFFNHSCAPNCWYSGDNLIVAMRDIRKDEHIVYDYAMTETEASLHAGLVCL 137
ML + V+V+ N YGFEC G+FAKE + G ++W Y EG ++L T+ K +I A P + L+TYSYM DD + ST NP DPS++FNHSC P CWY GD I RD++K E + YDY+ TETE+S+H GL CL
Sbjct: 1 MLTEVVQVKQFNDYGFECWGLFAKEDLPKGTLVW-YAEGHDVLETFTKAEILA---HPEQETLITYSYMRGDDKFCSTLNPSSDPSWYFNHSCMPTCWYEGDERITTCRDVKKGEQLAYDYSCTETESSMHYGLRCL 133
BLAST of EWM28991.1 vs. NCBI_GenBank
Match: gi|1173941600|gb|OQR90728.1| (hypothetical protein ACHHYP_05288 [Achlya hypogyna]) HSP 1 Score: 144.436 bits (363), Expect = 2.240e-39 Identity = 71/137 (51.82%), Postives = 90/137 (65.69%), Query Frame = 0
Query: 1 MLVDKVEVRYHNLYGFECRGIFAKETIKAGEMIWTYKEGTEILRTYHKHQIDALPPSPAKVNLVTYSYMLDDDLYGSTPNPEEDPSYFFNHSCAPNCWYSGDNLIVAMRDIRKDEHIVYDYAMTETEASLHAGLVCL 137
ML + VEV+ N YGFEC G+FAKE + G ++W Y E +++ Y K +I A P K L+TYSYM DD YGST NP DPS++FNHSC P WY D+ I RD++K E + YDYA TETE+S+H GL CL
Sbjct: 1 MLTEVVEVKKFNDYGFECMGLFAKEDLPKGTLVW-YSEDIDVVDIYTKAEILA---HPQKDTLITYSYMRGDDRYGSTLNPSSDPSWYFNHSCDPTTWYETDDRIKTCRDVKKGEQLTYDYACTETESSMHFGLQCL 133
BLAST of EWM28991.1 vs. NCBI_GenBank
Match: gi|1173949565|gb|OQR97584.1| (3-deoxy-D-manno-octulosonic acid transferase [Achlya hypogyna]) HSP 1 Score: 149.443 bits (376), Expect = 4.180e-39 Identity = 64/136 (47.06%), Postives = 88/136 (64.71%), Query Frame = 0
Query: 1 MLVDKVEVRYHNLYGFECRGIFAKETIKAGEMIWTYKEGTEILRTYHKHQIDALPPSPAKVNLVTYSYMLDDDLYGSTPNPEEDPSYFFNHSCAPNCWYSGDNLIVAMRDIRKDEHIVYDYAMTETEASLHAGLVC 136
ML + VE+R YGFECRGIFA E + ++WT+ TE L T+ + A+ P + L +SYM+ DD + ST PE DP ++FNH+C PNCW+ GD +V R ++K E + YDYA TETE+SLHAG++C
Sbjct: 1 MLPETVELRAFQFYGFECRGIFAVEDLPENAVVWTWDTATEPLETFTRA---AIVSHPEREKLANFSYMVGDDAFASTLEPERDPCWYFNHACDPNCWFEGDGQLVTRRAVKKGEQLCYDYACTETESSLHAGMIC 133
BLAST of EWM28991.1 vs. NCBI_GenBank
Match: gi|1173928104|gb|OQR81801.1| (hypothetical protein THRCLA_11401 [Thraustotheca clavata]) HSP 1 Score: 143.665 bits (361), Expect = 4.679e-39 Identity = 70/137 (51.09%), Postives = 91/137 (66.42%), Query Frame = 0
Query: 1 MLVDKVEVRYHNLYGFECRGIFAKETIKAGEMIWTYKEGTEILRTYHKHQIDALPPSPAKVNLVTYSYMLDDDLYGSTPNPEEDPSYFFNHSCAPNCWYSGDNLIVAMRDIRKDEHIVYDYAMTETEASLHAGLVCL 137
ML + V+V+ N YGFEC G+FAKE + G +IW Y + T+++ Y K +I A P K L+TYSYM DD +GST NP D S++FNHSC P WY GD+ I RD++K E + YDYA TETE+S+H GL CL
Sbjct: 1 MLTEVVKVKKFNDYGFECMGLFAKEDLPKGTLIW-YSQDTDVVDIYTKAEILA---HPMKDTLITYSYMRGDDKFGSTLNPSSDASWYFNHSCDPTTWYEGDDRITTCRDVKKGEQLTYDYACTETESSMHYGLKCL 133
BLAST of EWM28991.1 vs. NCBI_GenBank
Match: gi|813200050|ref|XP_012209596.1| (hypothetical protein SPRG_14759 [Saprolegnia parasitica CBS 223.65] >gi|641525196|gb|KDO19679.1| hypothetical protein SPRG_14759 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 141.354 bits (355), Expect = 4.128e-38 Identity = 68/137 (49.64%), Postives = 90/137 (65.69%), Query Frame = 0
Query: 1 MLVDKVEVRYHNLYGFECRGIFAKETIKAGEMIWTYKEGTEILRTYHKHQIDALPPSPAKVNLVTYSYMLDDDLYGSTPNPEEDPSYFFNHSCAPNCWYSGDNLIVAMRDIRKDEHIVYDYAMTETEASLHAGLVCL 137
ML + V+V+ + YGFEC G+FAKE + G +IW Y + +++ Y K +I A P K L+TYSYM DD +G+T NP DPS++FNHSC P WY GD I RD++K E + YDYA TETE+S+H GL CL
Sbjct: 1 MLTEVVDVKKFHDYGFECMGLFAKEDLPKGTLIW-YSQDIDVVDIYTKAEILA---HPQKDTLITYSYMRGDDKFGTTLNPSSDPSWYFNHSCDPTTWYEGDERITTCRDVKKGEQLTYDYACTETESSMHYGLQCL 133
BLAST of EWM28991.1 vs. NCBI_GenBank
Match: gi|553194460|ref|XP_005855960.1| (hypothetical protein NGA_0547300, partial [Nannochloropsis gaditana CCMP526] >gi|422293103|gb|EKU20403.1| hypothetical protein NGA_0547300, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 133.65 bits (335), Expect = 6.924e-38 Identity = 61/70 (87.14%), Postives = 65/70 (92.86%), Query Frame = 0
Query: 1 MLVDKVEVRYHNLYGFECRGIFAKETIKAGEMIWTYKEGTEILRTYHKHQIDALPPSPAKVNLVTYSYML 70
MLVDKVEVRYHNLYGFECRGIFAKETIKAGEMIWTYKEGTEILRTYHKHQIDALPPSPAK+ + T + +
Sbjct: 36 MLVDKVEVRYHNLYGFECRGIFAKETIKAGEMIWTYKEGTEILRTYHKHQIDALPPSPAKMTICTVQHQI 105
BLAST of EWM28991.1 vs. NCBI_GenBank
Match: gi|813199674|ref|XP_012209408.1| (hypothetical protein SPRG_14749 [Saprolegnia parasitica CBS 223.65] >gi|641525449|gb|KDO19906.1| hypothetical protein SPRG_14749 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 139.813 bits (351), Expect = 1.292e-37 Identity = 67/137 (48.91%), Postives = 90/137 (65.69%), Query Frame = 0
Query: 1 MLVDKVEVRYHNLYGFECRGIFAKETIKAGEMIWTYKEGTEILRTYHKHQIDALPPSPAKVNLVTYSYMLDDDLYGSTPNPEEDPSYFFNHSCAPNCWYSGDNLIVAMRDIRKDEHIVYDYAMTETEASLHAGLVCL 137
ML + V+V+ + YGFEC G+FAK+ + G +IW Y + +++ Y K +I A P K L+TYSYM DD +G+T NP DPS++FNHSC P WY GD I RD++K E + YDYA TETE+S+H GL CL
Sbjct: 1 MLTEVVDVKKFHDYGFECMGLFAKDDLPKGTLIW-YSQDIDVVDIYTKAEILA---HPQKDTLITYSYMRGDDKFGTTLNPSSDPSWYFNHSCDPTTWYEGDERITTCRDVKKGEQLTYDYACTETESSMHYGLQCL 133 The following BLAST results are available for this feature:
BLAST of EWM28991.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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