EWM28992.1, cds1680 (CDS) Nannochloropsis gaditana

Overview
NameEWM28992.1
Unique Namecds1680
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:1254020..1254283 +

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Properties
Property NameValue
Protein idEWM28992.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100919g2.8312.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:1254020..1254283 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM28992.1 vs. NCBI_GenBank
Match: gi|585111490|gb|EWM28992.1| (hypothetical protein Naga_100919g2 [Nannochloropsis gaditana])

HSP 1 Score: 180.644 bits (457), Expect = 9.756e-58
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0 
Query:    1 MSCFVKPFLIGLSHFHPQAHVSANPLTDTRCKRSECLEGGKNWRRRRFLSTERGTMSVPKNKEDPRFMTTALGSIRTRSPFLFAGRR 87
            MSCFVKPFLIGLSHFHPQAHVSANPLTDTRCKRSECLEGGKNWRRRRFLSTERGTMSVPKNKEDPRFMTTALGSIRTRSPFLFAGRR
Sbjct:    1 MSCFVKPFLIGLSHFHPQAHVSANPLTDTRCKRSECLEGGKNWRRRRFLSTERGTMSVPKNKEDPRFMTTALGSIRTRSPFLFAGRR 87
The following BLAST results are available for this feature:
BLAST of EWM28992.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585111490|gb|EWM28992.1|9.756e-58100.00hypothetical protein Naga_100919g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1684rna1684Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications