EWM29000.1, cds1673 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29000.1 vs. NCBI_GenBank
Match: gi|585111499|gb|EWM29000.1| (pterin-4-alpha-carbinolamine dehydratase [Nannochloropsis gaditana]) HSP 1 Score: 317.005 bits (811), Expect = 1.424e-109 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
Query: 1 MPARNSLSLFSRLAPRSNLPSLLHGTSAFHNVHCNVTRPSQPFSTVGSQRIPHLSKQARAAALKEDLAGWVDVKGGERDAVEKTFIFHDFNEAWGFMSRVALLAEQHNHHPEWSNVYNKVHVVLTTHDAGGVSQKDVTLAKAMDTIVKKGKE 152
MPARNSLSLFSRLAPRSNLPSLLHGTSAFHNVHCNVTRPSQPFSTVGSQRIPHLSKQARAAALKEDLAGWVDVKGGERDAVEKTFIFHDFNEAWGFMSRVALLAEQHNHHPEWSNVYNKVHVVLTTHDAGGVSQKDVTLAKAMDTIVKKGKE
Sbjct: 1 MPARNSLSLFSRLAPRSNLPSLLHGTSAFHNVHCNVTRPSQPFSTVGSQRIPHLSKQARAAALKEDLAGWVDVKGGERDAVEKTFIFHDFNEAWGFMSRVALLAEQHNHHPEWSNVYNKVHVVLTTHDAGGVSQKDVTLAKAMDTIVKKGKE 152
BLAST of EWM29000.1 vs. NCBI_GenBank
Match: gi|553180891|ref|XP_005853477.1| (pterin-4-alpha-carbinolamine dehydratase, partial [Nannochloropsis gaditana CCMP526] >gi|422295584|gb|EKU22883.1| pterin-4-alpha-carbinolamine dehydratase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 314.694 bits (805), Expect = 2.045e-108 Identity = 149/152 (98.03%), Postives = 151/152 (99.34%), Query Frame = 0
Query: 1 MPARNSLSLFSRLAPRSNLPSLLHGTSAFHNVHCNVTRPSQPFSTVGSQRIPHLSKQARAAALKEDLAGWVDVKGGERDAVEKTFIFHDFNEAWGFMSRVALLAEQHNHHPEWSNVYNKVHVVLTTHDAGGVSQKDVTLAKAMDTIVKKGKE 152
MPARNSLSLFSRLAPRSNLPSLLHGTSAFHNVHCNVTRPSQPFSTVGSQRIPHLSKQARAAALKEDLAGWVDVKGGERDAVEKTFIFHDFNEAWGFMSRVALLAEQHNHHPEWSNVYNKVHV+LTTHDAGGVSQKDVTLAKAMDT VKKG+E
Sbjct: 18 MPARNSLSLFSRLAPRSNLPSLLHGTSAFHNVHCNVTRPSQPFSTVGSQRIPHLSKQARAAALKEDLAGWVDVKGGERDAVEKTFIFHDFNEAWGFMSRVALLAEQHNHHPEWSNVYNKVHVILTTHDAGGVSQKDVTLAKAMDTFVKKGEE 169
BLAST of EWM29000.1 vs. NCBI_GenBank
Match: gi|1119936553|ref|WP_072818293.1| (4a-hydroxytetrahydrobiopterin dehydratase [Bradyrhizobium erythrophlei] >gi|1109650933|emb|SHN74172.1| pterin-4-alpha-carbinolamine dehydratase [Bradyrhizobium erythrophlei]) HSP 1 Score: 127.872 bits (320), Expect = 1.468e-35 Identity = 59/96 (61.46%), Postives = 76/96 (79.17%), Query Frame = 0
Query: 51 IPHLSKQARAAALKEDLAGWVDVKGGERDAVEKTFIFHDFNEAWGFMSRVALLAEQHNHHPEWSNVYNKVHVVLTTHDAGGVSQKDVTLAKAMDTI 146
+ L+ +AR ALKE L+GW +V G RDA+E+TF+F DFNEA+GFM R AL+AE+ +HHPEW NVY V VVL+THDAGGV+Q+D+ LAKAM+ I
Sbjct: 2 VERLTAEARKTALKE-LSGWTEVAG--RDAIERTFVFKDFNEAFGFMGRAALVAEKSDHHPEWRNVYKTVEVVLSTHDAGGVTQRDIELAKAMNAI 94
BLAST of EWM29000.1 vs. NCBI_GenBank
Match: gi|1113554092|gb|OJY14171.1| (4a-hydroxytetrahydrobiopterin dehydratase [Rhizobiales bacterium 62-47]) HSP 1 Score: 126.716 bits (317), Expect = 4.056e-35 Identity = 61/94 (64.89%), Postives = 74/94 (78.72%), Query Frame = 0
Query: 53 HLSKQARAAALKEDLAGWVDVKGGERDAVEKTFIFHDFNEAWGFMSRVALLAEQHNHHPEWSNVYNKVHVVLTTHDAGGVSQKDVTLAKAMDTI 146
LS +AR AAL+E L GW DV G R+A+ +TFIF DFNEA+GFMSR AL+AE+ +HHPEW NVY V VVL THDAGGV+ +DVTLA+AM+ I
Sbjct: 4 RLSAEARRAALRE-LKGWSDVSG--REAITRTFIFKDFNEAFGFMSRAALVAEKSDHHPEWRNVYKTVEVVLATHDAGGVTARDVTLARAMNAI 94
BLAST of EWM29000.1 vs. NCBI_GenBank
Match: gi|639175452|ref|WP_024515076.1| (4a-hydroxytetrahydrobiopterin dehydratase [Bradyrhizobium sp. Tv2a-2]) HSP 1 Score: 126.331 bits (316), Expect = 5.646e-35 Identity = 59/96 (61.46%), Postives = 76/96 (79.17%), Query Frame = 0
Query: 51 IPHLSKQARAAALKEDLAGWVDVKGGERDAVEKTFIFHDFNEAWGFMSRVALLAEQHNHHPEWSNVYNKVHVVLTTHDAGGVSQKDVTLAKAMDTI 146
+ LS +AR +ALK L+GW +V G R+A+ +TF+F DFNEA+GFMSR AL+AE+H+HHPEW NVY V VVL THDAGGV+++DV LAKAM+ I
Sbjct: 2 VERLSAEARKSALK-TLSGWTEVAG--REAIARTFVFKDFNEAFGFMSRAALVAEKHDHHPEWRNVYKTVEVVLATHDAGGVTERDVALAKAMNAI 94
BLAST of EWM29000.1 vs. NCBI_GenBank
Match: gi|1174064189|ref|WP_081422080.1| (4a-hydroxytetrahydrobiopterin dehydratase [Tardiphaga robiniae]) HSP 1 Score: 126.716 bits (317), Expect = 7.619e-35 Identity = 63/114 (55.26%), Postives = 82/114 (71.93%), Query Frame = 0
Query: 33 HCNVTRPSQPFSTVGSQRIPHLSKQARAAALKEDLAGWVDVKGGERDAVEKTFIFHDFNEAWGFMSRVALLAEQHNHHPEWSNVYNKVHVVLTTHDAGGVSQKDVTLAKAMDTI 146
+C + R S+ + LS +AR AA KE L+GW +V G RDA+ +TF F DFNEA+GFM+RVA++AE+ +HHPEW NVY V VVL+THDA GV+Q+DV LAKAM+TI
Sbjct: 4 NCVIGRYSKVQVKQEVAMVERLSAEARKAAFKE-LSGWSEVSG--RDAIARTFTFKDFNEAFGFMARVAVVAEKSDHHPEWRNVYKTVEVVLSTHDADGVTQRDVDLAKAMNTI 114
BLAST of EWM29000.1 vs. NCBI_GenBank
Match: gi|1099527438|emb|SFL37834.1| (4a-hydroxytetrahydrobiopterin dehydratase [Bradyrhizobium sp. NFR13]) HSP 1 Score: 125.946 bits (315), Expect = 9.826e-35 Identity = 60/96 (62.50%), Postives = 77/96 (80.21%), Query Frame = 0
Query: 51 IPHLSKQARAAALKEDLAGWVDVKGGERDAVEKTFIFHDFNEAWGFMSRVALLAEQHNHHPEWSNVYNKVHVVLTTHDAGGVSQKDVTLAKAMDTI 146
+ LS +AR AALKE L+GW +V G RDA+ +TF F DFNEA+GFM+RVAL+AE+ +HHPEW NVY V VVL+THDA GV+++D+ LAKAM+TI
Sbjct: 2 VERLSAEARKAALKE-LSGWSEVSG--RDAIARTFTFKDFNEAFGFMARVALVAEKSDHHPEWRNVYKTVEVVLSTHDADGVTKRDIDLAKAMNTI 94
BLAST of EWM29000.1 vs. NCBI_GenBank
Match: gi|1016923514|gb|KZD21041.1| (4a-hydroxytetrahydrobiopterin dehydratase [Tardiphaga robiniae]) HSP 1 Score: 125.561 bits (314), Expect = 1.072e-34 Identity = 60/96 (62.50%), Postives = 76/96 (79.17%), Query Frame = 0
Query: 51 IPHLSKQARAAALKEDLAGWVDVKGGERDAVEKTFIFHDFNEAWGFMSRVALLAEQHNHHPEWSNVYNKVHVVLTTHDAGGVSQKDVTLAKAMDTI 146
+ LS +AR AA KE L+GW +V G RDA+ +TF F DFNEA+GFM+RVA++AE+ +HHPEW NVY V VVL+THDA GV+Q+DV LAKAM+TI
Sbjct: 2 VERLSAEARKAAFKE-LSGWSEVSG--RDAIARTFTFKDFNEAFGFMARVAVVAEKSDHHPEWRNVYKTVEVVLSTHDADGVTQRDVDLAKAMNTI 94
BLAST of EWM29000.1 vs. NCBI_GenBank
Match: gi|1093303590|emb|SEH83530.1| (4a-hydroxytetrahydrobiopterin dehydratase [Tardiphaga sp. OK245]) HSP 1 Score: 125.176 bits (313), Expect = 1.606e-34 Identity = 60/96 (62.50%), Postives = 77/96 (80.21%), Query Frame = 0
Query: 51 IPHLSKQARAAALKEDLAGWVDVKGGERDAVEKTFIFHDFNEAWGFMSRVALLAEQHNHHPEWSNVYNKVHVVLTTHDAGGVSQKDVTLAKAMDTI 146
+ LS +AR AALKE L+GW +V G RDA+ +TF F DFNEA+GFM+RVAL+AE+ +HHPEW NVY V VVL+THDA GV+++DV LA+AM+TI
Sbjct: 2 VERLSAEARKAALKE-LSGWSEVSG--RDAIARTFTFKDFNEAFGFMARVALVAEKSDHHPEWRNVYKTVEVVLSTHDADGVTKRDVDLARAMNTI 94
BLAST of EWM29000.1 vs. NCBI_GenBank
Match: gi|653549295|ref|WP_027580699.1| (4a-hydroxytetrahydrobiopterin dehydratase [Bradyrhizobium sp. Ai1a-2]) HSP 1 Score: 124.79 bits (312), Expect = 2.502e-34 Identity = 60/97 (61.86%), Postives = 76/97 (78.35%), Query Frame = 0
Query: 53 HLSKQARAAALKEDLAGWVDVKGGERDAVEKTFIFHDFNEAWGFMSRVALLAEQHNHHPEWSNVYNKVHVVLTTHDAGGVSQKDVTLAKAMDTIVKK 149
LS +AR +ALKE L+GW +V G R+A+ KTF F DFNEA+GFM+RVAL+AE+ +HHPEW NVY V VVL THDAGGV+ +D+ LAKAM+ I K+
Sbjct: 4 RLSAEARKSALKE-LSGWSEVPG--REAIAKTFTFRDFNEAFGFMTRVALVAEKRDHHPEWRNVYKTVDVVLATHDAGGVTARDIELAKAMEAIAKQ 97 The following BLAST results are available for this feature:
BLAST of EWM29000.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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