EWM29005.1, cds1669 (CDS) Nannochloropsis gaditana

Overview
NameEWM29005.1
Unique Namecds1669
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:1231494..1231955 +
Alignment locationCM002457.1:1232098..1233180 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29005.1
Production channel
Orig transcript idgnl|cribi|Naga_100585g2.10749.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:1231494..1231955 +
CM002457.1supercontigCM002457.1:1232098..1233180 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR003347JmjC_dom
Homology
BLAST of EWM29005.1 vs. NCBI_GenBank
Match: gi|585111508|gb|EWM29005.1| (ion channel [Nannochloropsis gaditana])

HSP 1 Score: 1040.02 bits (2688), Expect = 0.000e+0
Identity = 514/514 (100.00%), Postives = 514/514 (100.00%), Query Frame = 0
Query:    1 MTATPATFSSFTPPGSPPRKRNKAQEPSPSQDLPCINNYRGYVPPPGTTTVEAIDLPVFLSTHGERQAPFAFFRQYIGPRKPVLIRGTLPDQQWRAGTMWKDPEYLKSKAGKARVRVETRENTREEYGQGKETTMLFEEFVTEVVDKENQLLYLTTQELDIGPDDRPALMSSPLTELQGDLPLRPSLLRLLVPQNMNLWMGRSGRGEGGREGESSSGLHHDYHDNLYILLGGRKVFRLYAPSEAPNMYTLGKLRLVHGNGRLNYYGQPLTCADGREKNAVKAWEAARRLEEVARRSERESGKEGGREREEEALEAALEAVLDTELEGEEGKEGQEEEEEEDAASDQEEYPRLQAPQSGSPLPPSLPPPLPPSLPSTTFARTGKPPANFSRVDLTAPDGVDPALFPAFPRHPPLEVEVQEGEMLYLPAGWFHHVQSKGGIHMAVNYWFHPPDGEGGGGEGKDSVYMDGFWERDWQERMQGRREQEAVGGGGGNDGGSREGSGKERRGEVERDGSE 514
            MTATPATFSSFTPPGSPPRKRNKAQEPSPSQDLPCINNYRGYVPPPGTTTVEAIDLPVFLSTHGERQAPFAFFRQYIGPRKPVLIRGTLPDQQWRAGTMWKDPEYLKSKAGKARVRVETRENTREEYGQGKETTMLFEEFVTEVVDKENQLLYLTTQELDIGPDDRPALMSSPLTELQGDLPLRPSLLRLLVPQNMNLWMGRSGRGEGGREGESSSGLHHDYHDNLYILLGGRKVFRLYAPSEAPNMYTLGKLRLVHGNGRLNYYGQPLTCADGREKNAVKAWEAARRLEEVARRSERESGKEGGREREEEALEAALEAVLDTELEGEEGKEGQEEEEEEDAASDQEEYPRLQAPQSGSPLPPSLPPPLPPSLPSTTFARTGKPPANFSRVDLTAPDGVDPALFPAFPRHPPLEVEVQEGEMLYLPAGWFHHVQSKGGIHMAVNYWFHPPDGEGGGGEGKDSVYMDGFWERDWQERMQGRREQEAVGGGGGNDGGSREGSGKERRGEVERDGSE
Sbjct:    1 MTATPATFSSFTPPGSPPRKRNKAQEPSPSQDLPCINNYRGYVPPPGTTTVEAIDLPVFLSTHGERQAPFAFFRQYIGPRKPVLIRGTLPDQQWRAGTMWKDPEYLKSKAGKARVRVETRENTREEYGQGKETTMLFEEFVTEVVDKENQLLYLTTQELDIGPDDRPALMSSPLTELQGDLPLRPSLLRLLVPQNMNLWMGRSGRGEGGREGESSSGLHHDYHDNLYILLGGRKVFRLYAPSEAPNMYTLGKLRLVHGNGRLNYYGQPLTCADGREKNAVKAWEAARRLEEVARRSERESGKEGGREREEEALEAALEAVLDTELEGEEGKEGQEEEEEEDAASDQEEYPRLQAPQSGSPLPPSLPPPLPPSLPSTTFARTGKPPANFSRVDLTAPDGVDPALFPAFPRHPPLEVEVQEGEMLYLPAGWFHHVQSKGGIHMAVNYWFHPPDGEGGGGEGKDSVYMDGFWERDWQERMQGRREQEAVGGGGGNDGGSREGSGKERRGEVERDGSE 514          
BLAST of EWM29005.1 vs. NCBI_GenBank
Match: gi|325183475|emb|CCA17935.1| (ion channel putative [Albugo laibachii Nc14])

HSP 1 Score: 279.641 bits (714), Expect = 8.098e-79
Identity = 190/516 (36.82%), Postives = 270/516 (52.33%), Query Frame = 0
Query:   22 NKAQEPSPSQDLPC--INNYRGYVPPPGTTTVEAIDLPVFLSTHGERQAPFAFFRQYIGPRKPVLIRGTLPDQQWRAGTMWKDPEYLKSKAGKARVRVETRENTREEYGQGKETTMLFEEFVTEVVDKENQLLYLTTQELDIGPDDRPALMSSPLTELQGDLPLRPSLLRLLVPQNMNLWMGRSGRGEGGREGESSSGLHHDYHDNLYILLGGRKVFRLYAPSEAPNMYTLGKLRLVHGNGRLNYYGQPLTCADGREKNAVKAWEAARRLEE---VARRSER--ESGKEGGREREEEA---LEAALEAVLDTELEGEEGKEGQ----EEEEEEDAASDQEEYPRLQAPQSGSPLPPSLPPPLPPSLPST---TFARTGKPPANFSRVDLTAPDG------VDPALFPAFPRHPPLEVEVQEGEMLYLPAGWFHHVQSKGGI--HMAVNYWFHPPDGEGGGGEGKDSVYMDGFWERDWQERMQGRREQEAVGGGGGNDGGSREGSGKER--RGEVER 510
            N A E      L C  +N+Y G      +  +  I L            P  FF +YI  R PV++ G L D  + A   W+  EYL + +G+  V+VE R N  E +G+G+ET M F  F+ ++V++ + L YLTTQ+++ G   RP LM+  +  L+ D P+RP+L+  L+PQN+N+WMG +  G       +SSGLHHDYHDN+YILL G+K FRLY+P++A  +YT GKL  VH NGR+NY G+ +T A G + ++  A  AA   EE      ++E+  E+GK G +E  E+A    EAA++A+L  E   E  +EG+    ++ +E DA  D       QAP+  S          P SLP++      RT   P NFS++D +          VD  L+P F        EV  G++LYLPA WFH V+S G    H+A+NYWFHPPD      E     Y   FW+R++  R          G     D  + E   K R  R ++ER
Sbjct: 2054 NCASEKRLKSSLHCSNVNHYSGCTVSDDSFQISRIKLSEI--------DPKLFFERYIATRTPVVLEGALADPGFSALKKWESNEYLDTLSGEELVQVEYRANEMESFGRGRETQMSFHSFL-QLVERGDTLHYLTTQDVEEGESGRPELMAPFVQRLRNDFPIRPALMGNLIPQNINVWMGHARNG-------ASSGLHHDYHDNMYILLRGKKSFRLYSPADAERLYTRGKLAFVHENGRINYEGE-ITTAYGADPSSEAAAIAAMEKEEAEWALSQAEKALENGKIGAKEAFEKAEIRFEAAMDAILSAEFGDESDQEGENHSRDDLDESDAPIDT------QAPEITSS---------PESLPASKHRKVDRTLVNPLNFSKIDASLMQDSALREEVD-TLYPEFQHARAAFCEVSAGDILYLPASWFHEVRSFGSSNGHLALNYWFHPPDQLSNFQEP----YSSQFWKRNFLSR----------GIESNGDVATTENVIKRRKLREQIER 2522          
BLAST of EWM29005.1 vs. NCBI_GenBank
Match: gi|325183456|emb|CCA17916.1| (ion channel putative [Albugo laibachii Nc14])

HSP 1 Score: 279.641 bits (714), Expect = 8.319e-79
Identity = 190/516 (36.82%), Postives = 270/516 (52.33%), Query Frame = 0
Query:   22 NKAQEPSPSQDLPC--INNYRGYVPPPGTTTVEAIDLPVFLSTHGERQAPFAFFRQYIGPRKPVLIRGTLPDQQWRAGTMWKDPEYLKSKAGKARVRVETRENTREEYGQGKETTMLFEEFVTEVVDKENQLLYLTTQELDIGPDDRPALMSSPLTELQGDLPLRPSLLRLLVPQNMNLWMGRSGRGEGGREGESSSGLHHDYHDNLYILLGGRKVFRLYAPSEAPNMYTLGKLRLVHGNGRLNYYGQPLTCADGREKNAVKAWEAARRLEE---VARRSER--ESGKEGGREREEEA---LEAALEAVLDTELEGEEGKEGQ----EEEEEEDAASDQEEYPRLQAPQSGSPLPPSLPPPLPPSLPST---TFARTGKPPANFSRVDLTAPDG------VDPALFPAFPRHPPLEVEVQEGEMLYLPAGWFHHVQSKGGI--HMAVNYWFHPPDGEGGGGEGKDSVYMDGFWERDWQERMQGRREQEAVGGGGGNDGGSREGSGKER--RGEVER 510
            N A E      L C  +N+Y G      +  +  I L            P  FF +YI  R PV++ G L D  + A   W+  EYL + +G+  V+VE R N  E +G+G+ET M F  F+ ++V++ + L YLTTQ+++ G   RP LM+  +  L+ D P+RP+L+  L+PQN+N+WMG +  G       +SSGLHHDYHDN+YILL G+K FRLY+P++A  +YT GKL  VH NGR+NY G+ +T A G + ++  A  AA   EE      ++E+  E+GK G +E  E+A    EAA++A+L  E   E  +EG+    ++ +E DA  D       QAP+  S          P SLP++      RT   P NFS++D +          VD  L+P F        EV  G++LYLPA WFH V+S G    H+A+NYWFHPPD      E     Y   FW+R++  R          G     D  + E   K R  R ++ER
Sbjct: 2031 NCASEKRLKSSLHCSNVNHYSGCTVSDDSFQISRIKLSEI--------DPKLFFERYIATRTPVVLEGALADPGFSALKKWESNEYLDTLSGEELVQVEYRANEMESFGRGRETQMSFHSFL-QLVERGDTLHYLTTQDVEEGESGRPELMAPFVQRLRNDFPIRPALMGNLIPQNINVWMGHARNG-------ASSGLHHDYHDNMYILLRGKKSFRLYSPADAERLYTRGKLAFVHENGRINYEGE-ITTAYGADPSSEAAAIAAMEKEEAEWALSQAEKALENGKIGAKEAFEKAEIRFEAAMDAILSAEFGDESDQEGENHSRDDLDESDAPIDT------QAPEITSS---------PESLPASKHRKVDRTLVNPLNFSKIDASLMQDSALREEVD-TLYPEFQHARAAFCEVSAGDILYLPASWFHEVRSFGSSNGHLALNYWFHPPDQLSNFQEP----YSSQFWKRNFLSR----------GIESNGDVATTENVIKRRKLREQIER 2499          
BLAST of EWM29005.1 vs. NCBI_GenBank
Match: gi|325183461|emb|CCA17921.1| (ion channel putative [Albugo laibachii Nc14])

HSP 1 Score: 279.641 bits (714), Expect = 8.403e-79
Identity = 190/516 (36.82%), Postives = 270/516 (52.33%), Query Frame = 0
Query:   22 NKAQEPSPSQDLPC--INNYRGYVPPPGTTTVEAIDLPVFLSTHGERQAPFAFFRQYIGPRKPVLIRGTLPDQQWRAGTMWKDPEYLKSKAGKARVRVETRENTREEYGQGKETTMLFEEFVTEVVDKENQLLYLTTQELDIGPDDRPALMSSPLTELQGDLPLRPSLLRLLVPQNMNLWMGRSGRGEGGREGESSSGLHHDYHDNLYILLGGRKVFRLYAPSEAPNMYTLGKLRLVHGNGRLNYYGQPLTCADGREKNAVKAWEAARRLEE---VARRSER--ESGKEGGREREEEA---LEAALEAVLDTELEGEEGKEGQ----EEEEEEDAASDQEEYPRLQAPQSGSPLPPSLPPPLPPSLPST---TFARTGKPPANFSRVDLTAPDG------VDPALFPAFPRHPPLEVEVQEGEMLYLPAGWFHHVQSKGGI--HMAVNYWFHPPDGEGGGGEGKDSVYMDGFWERDWQERMQGRREQEAVGGGGGNDGGSREGSGKER--RGEVER 510
            N A E      L C  +N+Y G      +  +  I L            P  FF +YI  R PV++ G L D  + A   W+  EYL + +G+  V+VE R N  E +G+G+ET M F  F+ ++V++ + L YLTTQ+++ G   RP LM+  +  L+ D P+RP+L+  L+PQN+N+WMG +  G       +SSGLHHDYHDN+YILL G+K FRLY+P++A  +YT GKL  VH NGR+NY G+ +T A G + ++  A  AA   EE      ++E+  E+GK G +E  E+A    EAA++A+L  E   E  +EG+    ++ +E DA  D       QAP+  S          P SLP++      RT   P NFS++D +          VD  L+P F        EV  G++LYLPA WFH V+S G    H+A+NYWFHPPD      E     Y   FW+R++  R          G     D  + E   K R  R ++ER
Sbjct: 2031 NCASEKRLKSSLHCSNVNHYSGCTVSDDSFQISRIKLSEI--------DPKLFFERYIATRTPVVLEGALADPGFSALKKWESNEYLDTLSGEELVQVEYRANEMESFGRGRETQMSFHSFL-QLVERGDTLHYLTTQDVEEGESGRPELMAPFVQRLRNDFPIRPALMGNLIPQNINVWMGHARNG-------ASSGLHHDYHDNMYILLRGKKSFRLYSPADAERLYTRGKLAFVHENGRINYEGE-ITTAYGADPSSEAAAIAAMEKEEAEWALSQAEKALENGKIGAKEAFEKAEIRFEAAMDAILSAEFGDESDQEGENHSRDDLDESDAPIDT------QAPEITSS---------PESLPASKHRKVDRTLVNPLNFSKIDASLMQDSALREEVD-TLYPEFQHARAAFCEVSAGDILYLPASWFHEVRSFGSSNGHLALNYWFHPPDQLSNFQEP----YSSQFWKRNFLSR----------GIESNGDVATTENVIKRRKLREQIER 2499          
BLAST of EWM29005.1 vs. NCBI_GenBank
Match: gi|325183453|emb|CCA17913.1| (ion channel putative [Albugo laibachii Nc14])

HSP 1 Score: 279.641 bits (714), Expect = 8.575e-79
Identity = 190/516 (36.82%), Postives = 270/516 (52.33%), Query Frame = 0
Query:   22 NKAQEPSPSQDLPC--INNYRGYVPPPGTTTVEAIDLPVFLSTHGERQAPFAFFRQYIGPRKPVLIRGTLPDQQWRAGTMWKDPEYLKSKAGKARVRVETRENTREEYGQGKETTMLFEEFVTEVVDKENQLLYLTTQELDIGPDDRPALMSSPLTELQGDLPLRPSLLRLLVPQNMNLWMGRSGRGEGGREGESSSGLHHDYHDNLYILLGGRKVFRLYAPSEAPNMYTLGKLRLVHGNGRLNYYGQPLTCADGREKNAVKAWEAARRLEE---VARRSER--ESGKEGGREREEEA---LEAALEAVLDTELEGEEGKEGQ----EEEEEEDAASDQEEYPRLQAPQSGSPLPPSLPPPLPPSLPST---TFARTGKPPANFSRVDLTAPDG------VDPALFPAFPRHPPLEVEVQEGEMLYLPAGWFHHVQSKGGI--HMAVNYWFHPPDGEGGGGEGKDSVYMDGFWERDWQERMQGRREQEAVGGGGGNDGGSREGSGKER--RGEVER 510
            N A E      L C  +N+Y G      +  +  I L            P  FF +YI  R PV++ G L D  + A   W+  EYL + +G+  V+VE R N  E +G+G+ET M F  F+ ++V++ + L YLTTQ+++ G   RP LM+  +  L+ D P+RP+L+  L+PQN+N+WMG +  G       +SSGLHHDYHDN+YILL G+K FRLY+P++A  +YT GKL  VH NGR+NY G+ +T A G + ++  A  AA   EE      ++E+  E+GK G +E  E+A    EAA++A+L  E   E  +EG+    ++ +E DA  D       QAP+  S          P SLP++      RT   P NFS++D +          VD  L+P F        EV  G++LYLPA WFH V+S G    H+A+NYWFHPPD      E     Y   FW+R++  R          G     D  + E   K R  R ++ER
Sbjct: 2053 NCASEKRLKSSLHCSNVNHYSGCTVSDDSFQISRIKLSEI--------DPKLFFERYIATRTPVVLEGALADPGFSALKKWESNEYLDTLSGEELVQVEYRANEMESFGRGRETQMSFHSFL-QLVERGDTLHYLTTQDVEEGESGRPELMAPFVQRLRNDFPIRPALMGNLIPQNINVWMGHARNG-------ASSGLHHDYHDNMYILLRGKKSFRLYSPADAERLYTRGKLAFVHENGRINYEGE-ITTAYGADPSSEAAAIAAMEKEEAEWALSQAEKALENGKIGAKEAFEKAEIRFEAAMDAILSAEFGDESDQEGENHSRDDLDESDAPIDT------QAPEITSS---------PESLPASKHRKVDRTLVNPLNFSKIDASLMQDSALREEVD-TLYPEFQHARAAFCEVSAGDILYLPASWFHEVRSFGSSNGHLALNYWFHPPDQLSNFQEP----YSSQFWKRNFLSR----------GIESNGDVATTENVIKRRKLREQIER 2521          
BLAST of EWM29005.1 vs. NCBI_GenBank
Match: gi|325183460|emb|CCA17920.1| (ion channel putative [Albugo laibachii Nc14])

HSP 1 Score: 279.641 bits (714), Expect = 8.898e-79
Identity = 190/516 (36.82%), Postives = 270/516 (52.33%), Query Frame = 0
Query:   22 NKAQEPSPSQDLPC--INNYRGYVPPPGTTTVEAIDLPVFLSTHGERQAPFAFFRQYIGPRKPVLIRGTLPDQQWRAGTMWKDPEYLKSKAGKARVRVETRENTREEYGQGKETTMLFEEFVTEVVDKENQLLYLTTQELDIGPDDRPALMSSPLTELQGDLPLRPSLLRLLVPQNMNLWMGRSGRGEGGREGESSSGLHHDYHDNLYILLGGRKVFRLYAPSEAPNMYTLGKLRLVHGNGRLNYYGQPLTCADGREKNAVKAWEAARRLEE---VARRSER--ESGKEGGREREEEA---LEAALEAVLDTELEGEEGKEGQ----EEEEEEDAASDQEEYPRLQAPQSGSPLPPSLPPPLPPSLPST---TFARTGKPPANFSRVDLTAPDG------VDPALFPAFPRHPPLEVEVQEGEMLYLPAGWFHHVQSKGGI--HMAVNYWFHPPDGEGGGGEGKDSVYMDGFWERDWQERMQGRREQEAVGGGGGNDGGSREGSGKER--RGEVER 510
            N A E      L C  +N+Y G      +  +  I L            P  FF +YI  R PV++ G L D  + A   W+  EYL + +G+  V+VE R N  E +G+G+ET M F  F+ ++V++ + L YLTTQ+++ G   RP LM+  +  L+ D P+RP+L+  L+PQN+N+WMG +  G       +SSGLHHDYHDN+YILL G+K FRLY+P++A  +YT GKL  VH NGR+NY G+ +T A G + ++  A  AA   EE      ++E+  E+GK G +E  E+A    EAA++A+L  E   E  +EG+    ++ +E DA  D       QAP+  S          P SLP++      RT   P NFS++D +          VD  L+P F        EV  G++LYLPA WFH V+S G    H+A+NYWFHPPD      E     Y   FW+R++  R          G     D  + E   K R  R ++ER
Sbjct: 2032 NCASEKRLKSSLHCSNVNHYSGCTVSDDSFQISRIKLSEI--------DPKLFFERYIATRTPVVLEGALADPGFSALKKWESNEYLDTLSGEELVQVEYRANEMESFGRGRETQMSFHSFL-QLVERGDTLHYLTTQDVEEGESGRPELMAPFVQRLRNDFPIRPALMGNLIPQNINVWMGHARNG-------ASSGLHHDYHDNMYILLRGKKSFRLYSPADAERLYTRGKLAFVHENGRINYEGE-ITTAYGADPSSEAAAIAAMEKEEAEWALSQAEKALENGKIGAKEAFEKAEIRFEAAMDAILSAEFGDESDQEGENHSRDDLDESDAPIDT------QAPEITSS---------PESLPASKHRKVDRTLVNPLNFSKIDASLMQDSALREEVD-TLYPEFQHARAAFCEVSAGDILYLPASWFHEVRSFGSSNGHLALNYWFHPPDQLSNFQEP----YSSQFWKRNFLSR----------GIESNGDVATTENVIKRRKLREQIER 2500          
BLAST of EWM29005.1 vs. NCBI_GenBank
Match: gi|325183457|emb|CCA17917.1| (ion channel putative [Albugo laibachii Nc14])

HSP 1 Score: 279.641 bits (714), Expect = 9.153e-79
Identity = 190/516 (36.82%), Postives = 270/516 (52.33%), Query Frame = 0
Query:   22 NKAQEPSPSQDLPC--INNYRGYVPPPGTTTVEAIDLPVFLSTHGERQAPFAFFRQYIGPRKPVLIRGTLPDQQWRAGTMWKDPEYLKSKAGKARVRVETRENTREEYGQGKETTMLFEEFVTEVVDKENQLLYLTTQELDIGPDDRPALMSSPLTELQGDLPLRPSLLRLLVPQNMNLWMGRSGRGEGGREGESSSGLHHDYHDNLYILLGGRKVFRLYAPSEAPNMYTLGKLRLVHGNGRLNYYGQPLTCADGREKNAVKAWEAARRLEE---VARRSER--ESGKEGGREREEEA---LEAALEAVLDTELEGEEGKEGQ----EEEEEEDAASDQEEYPRLQAPQSGSPLPPSLPPPLPPSLPST---TFARTGKPPANFSRVDLTAPDG------VDPALFPAFPRHPPLEVEVQEGEMLYLPAGWFHHVQSKGGI--HMAVNYWFHPPDGEGGGGEGKDSVYMDGFWERDWQERMQGRREQEAVGGGGGNDGGSREGSGKER--RGEVER 510
            N A E      L C  +N+Y G      +  +  I L            P  FF +YI  R PV++ G L D  + A   W+  EYL + +G+  V+VE R N  E +G+G+ET M F  F+ ++V++ + L YLTTQ+++ G   RP LM+  +  L+ D P+RP+L+  L+PQN+N+WMG +  G       +SSGLHHDYHDN+YILL G+K FRLY+P++A  +YT GKL  VH NGR+NY G+ +T A G + ++  A  AA   EE      ++E+  E+GK G +E  E+A    EAA++A+L  E   E  +EG+    ++ +E DA  D       QAP+  S          P SLP++      RT   P NFS++D +          VD  L+P F        EV  G++LYLPA WFH V+S G    H+A+NYWFHPPD      E     Y   FW+R++  R          G     D  + E   K R  R ++ER
Sbjct: 2032 NCASEKRLKSSLHCSNVNHYSGCTVSDDSFQISRIKLSEI--------DPKLFFERYIATRTPVVLEGALADPGFSALKKWESNEYLDTLSGEELVQVEYRANEMESFGRGRETQMSFHSFL-QLVERGDTLHYLTTQDVEEGESGRPELMAPFVQRLRNDFPIRPALMGNLIPQNINVWMGHARNG-------ASSGLHHDYHDNMYILLRGKKSFRLYSPADAERLYTRGKLAFVHENGRINYEGE-ITTAYGADPSSEAAAIAAMEKEEAEWALSQAEKALENGKIGAKEAFEKAEIRFEAAMDAILSAEFGDESDQEGENHSRDDLDESDAPIDT------QAPEITSS---------PESLPASKHRKVDRTLVNPLNFSKIDASLMQDSALREEVD-TLYPEFQHARAAFCEVSAGDILYLPASWFHEVRSFGSSNGHLALNYWFHPPDQLSNFQEP----YSSQFWKRNFLSR----------GIESNGDVATTENVIKRRKLREQIER 2500          
BLAST of EWM29005.1 vs. NCBI_GenBank
Match: gi|325183480|emb|CCA17940.1| (ion channel putative [Albugo laibachii Nc14])

HSP 1 Score: 279.641 bits (714), Expect = 9.968e-79
Identity = 190/516 (36.82%), Postives = 270/516 (52.33%), Query Frame = 0
Query:   22 NKAQEPSPSQDLPC--INNYRGYVPPPGTTTVEAIDLPVFLSTHGERQAPFAFFRQYIGPRKPVLIRGTLPDQQWRAGTMWKDPEYLKSKAGKARVRVETRENTREEYGQGKETTMLFEEFVTEVVDKENQLLYLTTQELDIGPDDRPALMSSPLTELQGDLPLRPSLLRLLVPQNMNLWMGRSGRGEGGREGESSSGLHHDYHDNLYILLGGRKVFRLYAPSEAPNMYTLGKLRLVHGNGRLNYYGQPLTCADGREKNAVKAWEAARRLEE---VARRSER--ESGKEGGREREEEA---LEAALEAVLDTELEGEEGKEGQ----EEEEEEDAASDQEEYPRLQAPQSGSPLPPSLPPPLPPSLPST---TFARTGKPPANFSRVDLTAPDG------VDPALFPAFPRHPPLEVEVQEGEMLYLPAGWFHHVQSKGGI--HMAVNYWFHPPDGEGGGGEGKDSVYMDGFWERDWQERMQGRREQEAVGGGGGNDGGSREGSGKER--RGEVER 510
            N A E      L C  +N+Y G      +  +  I L            P  FF +YI  R PV++ G L D  + A   W+  EYL + +G+  V+VE R N  E +G+G+ET M F  F+ ++V++ + L YLTTQ+++ G   RP LM+  +  L+ D P+RP+L+  L+PQN+N+WMG +  G       +SSGLHHDYHDN+YILL G+K FRLY+P++A  +YT GKL  VH NGR+NY G+ +T A G + ++  A  AA   EE      ++E+  E+GK G +E  E+A    EAA++A+L  E   E  +EG+    ++ +E DA  D       QAP+  S          P SLP++      RT   P NFS++D +          VD  L+P F        EV  G++LYLPA WFH V+S G    H+A+NYWFHPPD      E     Y   FW+R++  R          G     D  + E   K R  R ++ER
Sbjct: 2031 NCASEKRLKSSLHCSNVNHYSGCTVSDDSFQISRIKLSEI--------DPKLFFERYIATRTPVVLEGALADPGFSALKKWESNEYLDTLSGEELVQVEYRANEMESFGRGRETQMSFHSFL-QLVERGDTLHYLTTQDVEEGESGRPELMAPFVQRLRNDFPIRPALMGNLIPQNINVWMGHARNG-------ASSGLHHDYHDNMYILLRGKKSFRLYSPADAERLYTRGKLAFVHENGRINYEGE-ITTAYGADPSSEAAAIAAMEKEEAEWALSQAEKALENGKIGAKEAFEKAEIRFEAAMDAILSAEFGDESDQEGENHSRDDLDESDAPIDT------QAPEITSS---------PESLPASKHRKVDRTLVNPLNFSKIDASLMQDSALREEVD-TLYPEFQHARAAFCEVSAGDILYLPASWFHEVRSFGSSNGHLALNYWFHPPDQLSNFQEP----YSSQFWKRNFLSR----------GIESNGDVATTENVIKRRKLREQIER 2499          
BLAST of EWM29005.1 vs. NCBI_GenBank
Match: gi|325183452|emb|CCA17912.1| (ion channel putative [Albugo laibachii Nc14])

HSP 1 Score: 279.256 bits (713), Expect = 1.037e-78
Identity = 182/480 (37.92%), Postives = 259/480 (53.96%), Query Frame = 0
Query:   22 NKAQEPSPSQDLPC--INNYRGYVPPPGTTTVEAIDLPVFLSTHGERQAPFAFFRQYIGPRKPVLIRGTLPDQQWRAGTMWKDPEYLKSKAGKARVRVETRENTREEYGQGKETTMLFEEFVTEVVDKENQLLYLTTQELDIGPDDRPALMSSPLTELQGDLPLRPSLLRLLVPQNMNLWMGRSGRGEGGREGESSSGLHHDYHDNLYILLGGRKVFRLYAPSEAPNMYTLGKLRLVHGNGRLNYYGQPLTCADGREKNAVKAWEAARRLEE---VARRSER--ESGKEGGREREEEA---LEAALEAVLDTELEGEEGKEGQ----EEEEEEDAASDQEEYPRLQAPQSGSPLPPSLPPPLPPSLPST---TFARTGKPPANFSRVDLTAPDG------VDPALFPAFPRHPPLEVEVQEGEMLYLPAGWFHHVQSKGGI--HMAVNYWFHPPDGEGGGGEGKDSVYMDGFWERDWQER 476
            N A E      L C  +N+Y G      +  +  I L            P  FF +YI  R PV++ G L D  + A   W+  EYL + +G+  V+VE R N  E +G+G+ET M F  F+ ++V++ + L YLTTQ+++ G   RP LM+  +  L+ D P+RP+L+  L+PQN+N+WMG +  G       +SSGLHHDYHDN+YILL G+K FRLY+P++A  +YT GKL  VH NGR+NY G+ +T A G + ++  A  AA   EE      ++E+  E+GK G +E  E+A    EAA++A+L  E   E  +EG+    ++ +E DA  D       QAP+  S          P SLP++      RT   P NFS++D +          VD  L+P F        EV  G++LYLPA WFH V+S G    H+A+NYWFHPPD      E     Y   FW+R++  R
Sbjct: 2053 NCASEKRLKSSLHCSNVNHYSGCTVSDDSFQISRIKLSEI--------DPKLFFERYIATRTPVVLEGALADPGFSALKKWESNEYLDTLSGEELVQVEYRANEMESFGRGRETQMSFHSFL-QLVERGDTLHYLTTQDVEEGESGRPELMAPFVQRLRNDFPIRPALMGNLIPQNINVWMGHARNG-------ASSGLHHDYHDNMYILLRGKKSFRLYSPADAERLYTRGKLAFVHENGRINYEGE-ITTAYGADPSSEAAAIAAMEKEEAEWALSQAEKALENGKIGAKEAFEKAEIRFEAAMDAILSAEFGDESDQEGENHSRDDLDESDAPIDT------QAPEITSS---------PESLPASKHRKVDRTLVNPLNFSKIDASLMQDSALREEVD-TLYPEFQHARAAFCEVSAGDILYLPASWFHEVRSFGSSNGHLALNYWFHPPDQLSNFQEP----YSSQFWKRNFLSR 2495          
BLAST of EWM29005.1 vs. NCBI_GenBank
Match: gi|325183472|emb|CCA17932.1| (ion channel putative [Albugo laibachii Nc14])

HSP 1 Score: 279.256 bits (713), Expect = 1.038e-78
Identity = 190/516 (36.82%), Postives = 270/516 (52.33%), Query Frame = 0
Query:   22 NKAQEPSPSQDLPC--INNYRGYVPPPGTTTVEAIDLPVFLSTHGERQAPFAFFRQYIGPRKPVLIRGTLPDQQWRAGTMWKDPEYLKSKAGKARVRVETRENTREEYGQGKETTMLFEEFVTEVVDKENQLLYLTTQELDIGPDDRPALMSSPLTELQGDLPLRPSLLRLLVPQNMNLWMGRSGRGEGGREGESSSGLHHDYHDNLYILLGGRKVFRLYAPSEAPNMYTLGKLRLVHGNGRLNYYGQPLTCADGREKNAVKAWEAARRLEE---VARRSER--ESGKEGGREREEEA---LEAALEAVLDTELEGEEGKEGQ----EEEEEEDAASDQEEYPRLQAPQSGSPLPPSLPPPLPPSLPST---TFARTGKPPANFSRVDLTAPDG------VDPALFPAFPRHPPLEVEVQEGEMLYLPAGWFHHVQSKGGI--HMAVNYWFHPPDGEGGGGEGKDSVYMDGFWERDWQERMQGRREQEAVGGGGGNDGGSREGSGKER--RGEVER 510
            N A E      L C  +N+Y G      +  +  I L            P  FF +YI  R PV++ G L D  + A   W+  EYL + +G+  V+VE R N  E +G+G+ET M F  F+ ++V++ + L YLTTQ+++ G   RP LM+  +  L+ D P+RP+L+  L+PQN+N+WMG +  G       +SSGLHHDYHDN+YILL G+K FRLY+P++A  +YT GKL  VH NGR+NY G+ +T A G + ++  A  AA   EE      ++E+  E+GK G +E  E+A    EAA++A+L  E   E  +EG+    ++ +E DA  D       QAP+  S          P SLP++      RT   P NFS++D +          VD  L+P F        EV  G++LYLPA WFH V+S G    H+A+NYWFHPPD      E     Y   FW+R++  R          G     D  + E   K R  R ++ER
Sbjct: 2053 NCASEKRLKSSLHCSNVNHYSGCTVSDDSFQISRIKLSEI--------DPKLFFERYIATRTPVVLEGALADPGFSALKKWESNEYLDTLSGEELVQVEYRANEMESFGRGRETQMSFHSFL-QLVERGDTLHYLTTQDVEEGESGRPELMAPFVQRLRNDFPIRPALMGNLIPQNINVWMGHARNG-------ASSGLHHDYHDNMYILLRGKKSFRLYSPADAERLYTRGKLAFVHENGRINYEGE-ITTAYGADPSSEAAAIAAMEKEEAEWALSQAEKALENGKIGAKEAFEKAEIRFEAAMDAILSAEFGDESDQEGENHSRDDLDESDAPIDT------QAPEITSS---------PESLPASKHRKVDRTLVNPLNFSKIDASLMQDSALREEVD-TLYPEFQHARAAFCEVSAGDILYLPASWFHEVRSFGSSNGHLALNYWFHPPDQLSNFQEP----YSSQFWKRNFLSR----------GIESNGDVATTENVIKRRKLREQIER 2521          
The following BLAST results are available for this feature:
BLAST of EWM29005.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111508|gb|EWM29005.1|0.000e+0100.00ion channel [Nannochloropsis gaditana][more]
gi|325183475|emb|CCA17935.1|8.098e-7936.82ion channel putative [Albugo laibachii Nc14][more]
gi|325183456|emb|CCA17916.1|8.319e-7936.82ion channel putative [Albugo laibachii Nc14][more]
gi|325183461|emb|CCA17921.1|8.403e-7936.82ion channel putative [Albugo laibachii Nc14][more]
gi|325183453|emb|CCA17913.1|8.575e-7936.82ion channel putative [Albugo laibachii Nc14][more]
gi|325183460|emb|CCA17920.1|8.898e-7936.82ion channel putative [Albugo laibachii Nc14][more]
gi|325183457|emb|CCA17917.1|9.153e-7936.82ion channel putative [Albugo laibachii Nc14][more]
gi|325183480|emb|CCA17940.1|9.968e-7936.82ion channel putative [Albugo laibachii Nc14][more]
gi|325183452|emb|CCA17912.1|1.037e-7837.92ion channel putative [Albugo laibachii Nc14][more]
gi|325183472|emb|CCA17932.1|1.038e-7836.82ion channel putative [Albugo laibachii Nc14][more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1673rna1673Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications