EWM29006.1, cds1667 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29006.1 vs. NCBI_GenBank
Match: gi|585111511|gb|EWM29006.1| (Uncharacterized protein Naga_100851g2 [Nannochloropsis gaditana]) HSP 1 Score: 253.062 bits (645), Expect = 3.844e-85 Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0
Query: 1 MRLLSHNVLRNTAKGVVDGYPLKIEAAQIDVRDTEPDLTFIRHLLPTISFPVLRSAAEDLGLDAAAFPASYSTTLGEDEAFLRALHKALFDVHVLEGSLVCPESGRRFSIRGGIPDMMLTDEELS 125
MRLLSHNVLRNTAKGVVDGYPLKIEAAQIDVRDTEPDLTFIRHLLPTISFPVLRSAAEDLGLDAAAFPASYSTTLGEDEAFLRALHKALFDVHVLEGSLVCPESGRRFSIRGGIPDMMLTDEELS
Sbjct: 1 MRLLSHNVLRNTAKGVVDGYPLKIEAAQIDVRDTEPDLTFIRHLLPTISFPVLRSAAEDLGLDAAAFPASYSTTLGEDEAFLRALHKALFDVHVLEGSLVCPESGRRFSIRGGIPDMMLTDEELS 125
BLAST of EWM29006.1 vs. NCBI_GenBank
Match: gi|585111846|gb|EWM29320.1| (TRM112-like protein [Nannochloropsis gaditana]) HSP 1 Score: 138.658 bits (348), Expect = 2.545e-39 Identity = 60/125 (48.00%), Postives = 95/125 (76.00%), Query Frame = 0
Query: 1 MRLLSHNVLRNTAKGVVDGYPLKIEAAQIDVRDTEPDLTFIRHLLPTISFPVLRSAAEDLGLDAAAFPASYSTTLGEDEAFLRALHKALFDVHVLEGSLVCPESGRRFSIRGGIPDMMLTDEELS 125
MRL++HN+L++ KGV++G+PL+IEA +++V++TE + F+++LLP + +P LR A+++LG+D P D++FL+ +HK L DVHVLEGSLVCPE+GRRF I GIP+M+L ++E++
Sbjct: 52 MRLITHNMLKSNVKGVINGFPLRIEAEKVEVKETEFNSEFVQNLLPKVDWPALRGASKELGMD--ELPEEMDEANKTDDSFLQLVHKLLLDVHVLEGSLVCPETGRRFPINNGIPNMLLHEDEVA 174
BLAST of EWM29006.1 vs. NCBI_GenBank
Match: gi|298714145|emb|CBJ27326.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 130.954 bits (328), Expect = 6.339e-37 Identity = 58/124 (46.77%), Postives = 89/124 (71.77%), Query Frame = 0
Query: 1 MRLLSHNVLRNTAKGVVDGYPLKIEAAQIDVRDTEPDLTFIRHLLPTISFPVLRSAAEDLGLDAAAFPASYSTTLGEDEAFLRALHKALFDVHVLEGSLVCPESGRRFSIRGGIPDMMLTDEEL 124
MRLL+HNVLR+ KGVV+GYPL+IEA + + ++E F++H+ T+ + L AA ++G+ + P + + L ED +FL ALH+ L D+HV+EG+LVCPE+GRRF I G+P++M T++E+
Sbjct: 1 MRLLTHNVLRSPMKGVVEGYPLRIEATDVQMVESEVKEEFVKHMATTLDWGALCKAAAEVGMPEGSLPPALTPELLEDSSFLEALHRVLMDMHVVEGTLVCPETGRRFPIAEGVPNLMCTEDEV 124
BLAST of EWM29006.1 vs. NCBI_GenBank
Match: gi|971507999|dbj|GAQ90207.1| (hypothetical protein KFL_006130040 [Klebsormidium nitens]) HSP 1 Score: 122.479 bits (306), Expect = 1.621e-33 Identity = 57/124 (45.97%), Postives = 82/124 (66.13%), Query Frame = 0
Query: 1 MRLLSHNVLRNTAKGVVDGYPLKIEAAQIDVRDTEPDLTFIRHLLPTISFPVLRSAAEDLGLDAAAFPASYSTTLGEDEAFLRALHKALFDVHVLEGSLVCPESGRRFSIRGGIPDMMLTDEEL 124
MRLL+HN+L KGV GYPLKIEA + + ++T+ + F+RH+ P + + LR AA LGL+ P + EDE FLR H L ++H+ EG+LVCPE+GRRF + GIP+M+L ++E+
Sbjct: 1 MRLLTHNMLACNIKGVTKGYPLKIEATKTEEKETDFNAGFLRHIYPKLDWKALREAAASLGLE--ELPEQVEPSQLEDEDFLRRFHHVLLEIHLEEGALVCPETGRRFPVSKGIPNMLLNEDEV 122
BLAST of EWM29006.1 vs. NCBI_GenBank
Match: gi|1150692982|ref|XP_020257429.1| (multifunctional methyltransferase subunit TRM112-like protein At1g22270 [Asparagus officinalis] >gi|1141994336|gb|ONK75555.1| uncharacterized protein A4U43_C03F18120 [Asparagus officinalis]) HSP 1 Score: 118.242 bits (295), Expect = 6.098e-32 Identity = 57/124 (45.97%), Postives = 82/124 (66.13%), Query Frame = 0
Query: 1 MRLLSHNVLRNTAKGVVDGYPLKIEAAQIDVRDTEPDLTFIRHLLPTISFPVLRSAAEDLGLDAAAFPASYSTTLGEDEAFLRALHKALFDVHVLEGSLVCPESGRRFSIRGGIPDMMLTDEEL 124
MRLL+HN+L + KGV GYPL+IEA Q ++ + + F+R++ P I +P L SAA+ LG P ++ E + FLR H AL +VHV EG+LVCPE+GRRF + GIP+M+L ++E+
Sbjct: 1 MRLLTHNMLASNIKGVTSGYPLRIEAHQSAAKEADFNADFLRNVFPKIDWPALVSAAKTLGY--GDLPEEAEPSMLESDEFLRRFHHALLEVHVEEGALVCPETGRRFPVNKGIPNMLLHEDEV 122
BLAST of EWM29006.1 vs. NCBI_GenBank
Match: gi|303274338|ref|XP_003056490.1| (methyltransferase-associated protein [Micromonas pusilla CCMP1545] >gi|226462574|gb|EEH59866.1| methyltransferase-associated protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 117.472 bits (293), Expect = 1.277e-31 Identity = 56/124 (45.16%), Postives = 79/124 (63.71%), Query Frame = 0
Query: 1 MRLLSHNVLRNTAKGVVDGYPLKIEAAQIDVRDTEPDLTFIRHLLPTISFPVLRSAAEDLGLDAAAFPASYSTTLGEDEAFLRALHKALFDVHVLEGSLVCPESGRRFSIRGGIPDMMLTDEEL 124
MRLL+HN+L + KG G+PLK+E + R TE D F+ H LP +++ R+AAE LG+D P++Y FLR H AL ++ V EG L+CPE+GRRF +R GIP+MML ++E+
Sbjct: 1 MRLLTHNLLASNVKGTTAGFPLKLEVLVKEERSTEFDAAFLLHTLPKLNWSAFRAAAESLGVD--KLPSTYPERDELTNEFLRVFHHALLEIEVQEGYLICPETGRRFPVRKGIPNMMLNEDEV 122
BLAST of EWM29006.1 vs. NCBI_GenBank
Match: gi|693501668|emb|CEF96672.1| (Uncharacterised protein family UPF0434/Trm112 [Ostreococcus tauri]) HSP 1 Score: 116.316 bits (290), Expect = 3.351e-31 Identity = 56/124 (45.16%), Postives = 80/124 (64.52%), Query Frame = 0
Query: 1 MRLLSHNVLRNTAKGVVDGYPLKIEAAQIDVRDTEPDLTFIRHLLPTISFPVLRSAAEDLGLDAAAFPASYSTTLGEDEAFLRALHKALFDVHVLEGSLVCPESGRRFSIRGGIPDMMLTDEEL 124
MRLL+HN+L AKGVV+G+PLKI + +TE + F+ H+LP + + +AA ++G A P +E FL+A H AL +VHV EG+LVCPESGR+F I GIP+M+L ++E+
Sbjct: 1 MRLLAHNMLACNAKGVVNGFPLKIVVKETRETETEFNAEFLVHMLPKMEWAAFVNAAREIG--AGELPGEIPDDAATNEEFLQAFHHALLEVHVEEGTLVCPESGRKFPINKGIPNMLLNEDEV 122
BLAST of EWM29006.1 vs. NCBI_GenBank
Match: gi|145341533|ref|XP_001415861.1| (predicted protein [Ostreococcus lucimarinus CCE9901] >gi|144576084|gb|ABO94153.1| predicted protein [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 115.931 bits (289), Expect = 4.912e-31 Identity = 58/126 (46.03%), Postives = 82/126 (65.08%), Query Frame = 0
Query: 1 MRLLSHNVLRNTAKGVVDGYPLKIEAAQIDVRDTEPDLT--FIRHLLPTISFPVLRSAAEDLGLDAAAFPASYSTTLGEDEAFLRALHKALFDVHVLEGSLVCPESGRRFSIRGGIPDMMLTDEEL 124
MRLL+HN+L AKGVV+G+PLKI + R+ E D F+ H+LP + + +AA+++GL+ P+ DE FLR H AL +VHV EG+LVCPESGR+F I GIP+M+L ++E+
Sbjct: 1 MRLLAHNMLACNAKGVVNGFPLKI--VPKETREVEVDFNAEFLTHMLPKMEWSAFVNAAKEIGLEG--LPSEIPDDAASDEEFLRTFHHALLEVHVEEGTLVCPESGRKFPINKGIPNMLLNEDEV 122
BLAST of EWM29006.1 vs. NCBI_GenBank
Match: gi|410913557|ref|XP_003970255.1| (PREDICTED: multifunctional methyltransferase subunit TRM112-like protein [Takifugu rubripes]) HSP 1 Score: 115.931 bits (289), Expect = 5.459e-31 Identity = 54/124 (43.55%), Postives = 80/124 (64.52%), Query Frame = 0
Query: 1 MRLLSHNVLRNTAKGVVDGYPLKIEAAQIDVRDTEPDLTFIRHLLPTISFPVLRSAAEDLGLDAAAFPASYSTTLGEDEAFLRALHKALFDVHVLEGSLVCPESGRRFSIRGGIPDMMLTDEEL 124
M+LL+HN+L + KGV GYPL I+A ++ V + E + F+ ++P + + L AAE+LG P G+DEAFL+ +H+ L +V V+EGSL CPESGR F I GIP+M+L ++E+
Sbjct: 1 MKLLTHNMLTSHVKGVTQGYPLLIKATEVKVNEVEFNPEFVVKMIPKLEWSALVQAAEELG-QKQDLPEQLVADYGKDEAFLKKVHRILLEVEVMEGSLKCPESGREFPITRGIPNMLLNEDEV 123
BLAST of EWM29006.1 vs. NCBI_GenBank
Match: gi|168020978|ref|XP_001763019.1| (predicted protein [Physcomitrella patens] >gi|162685831|gb|EDQ72224.1| predicted protein [Physcomitrella patens]) HSP 1 Score: 112.464 bits (280), Expect = 1.079e-29 Identity = 48/124 (38.71%), Postives = 81/124 (65.32%), Query Frame = 0
Query: 1 MRLLSHNVLRNTAKGVVDGYPLKIEAAQIDVRDTEPDLTFIRHLLPTISFPVLRSAAEDLGLDAAAFPASYSTTLGEDEAFLRALHKALFDVHVLEGSLVCPESGRRFSIRGGIPDMMLTDEEL 124
MRLL+HN+L KGV G+PL IE +++ +++E + F+RH+ P + + AA+ +G++ P + +D+ FLR H AL +VH+ EG+L+CPE+GRRF + G+P+M+L ++E+
Sbjct: 1 MRLLTHNMLACNIKGVTKGFPLGIEHTRLETKESELNADFLRHIFPKLDWKAFHEAAQSVGVNN--IPDQVEPVMLDDDEFLRKFHHALLEVHLEEGALICPETGRRFPVTKGVPNMLLNEDEV 122 The following BLAST results are available for this feature:
BLAST of EWM29006.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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