EWM29012.1, cds1660 (CDS) Nannochloropsis gaditana

Overview
NameEWM29012.1
Unique Namecds1660
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:1206805..1207916 -
Alignment locationCM002457.1:1205767..1206652 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29012.1
ProductRNA helicase DEAD-box type
Orig transcript idgnl|cribi|Naga_100780g2.7469.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:1206805..1207916 -
CM002457.1supercontigCM002457.1:1205767..1206652 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0000166nucleotide binding
GO:0003676nucleic acid binding
GO:0005524ATP binding
Vocabulary: INTERPRO
TermDefinition
IPR014014RNA_helicase_DEAD_Q_motif
IPR027417P-loop_NTPase
IPR011545DEAD/DEAH_box_helicase_dom
IPR001650Helicase_C
IPR014001Helicase_ATP-bd
Homology
BLAST of EWM29012.1 vs. NCBI_GenBank
Match: gi|585111523|gb|EWM29012.1| (RNA helicase DEAD-box type [Nannochloropsis gaditana])

HSP 1 Score: 1353.96 bits (3503), Expect = 0.000e+0
Identity = 665/665 (100.00%), Postives = 665/665 (100.00%), Query Frame = 0
Query:    1 MPRRVPLPWPWHPLLRYVSAGAASTFLAASSSRRIGMATTTTTTTVLSIFYLILSHSHSSTATLVDKRAGRGSTSGSRCSSSKRAFIQPSTPGRHLPKDHTGLYVGHEYMSHLSWPLGTKTRPCGGVRRCTSMGTPSQGEDLTANTGTFGENIPFAALGLSPWLTAALSGAGKATSTHIQALALPTILAGENVVIGSETGAGKTLAYLLPVMELAHRAHAARTAMKEKALAYYQERRGALKEGAGGRERVGEYSSLAEDYPWEAPFAIVLVPNGQLSEQVLRMAGEVLGQGEGEENVRVEALKGSVDVWPYRVGSRAAPDVLVCTPATLSSFDREVNLFGEVNILVVDEADMLLEGDYGRHLERILVAFKRADKLHTARSEPLTQYVLAAATLPSYGLKSVEELVKKRFPSAVRVHTDLMHKHHPQLTQVFVEAPEDLEGKIAMLLQVLEKLRTKGEEARRAEGGKEGGKEGEGEAQATILPKTMVFLNTATAAARTQIAVQAAGFPSVAFHKEVRREEREANLQRFRSNQVPLLVCTDLAARGLDIPDVRQVVQVEFAPNVVQHLHRIGRAVRAGREGRAVNFYDLGAHDLVESLQLAQADTLERSFSRQRGFRKKIKKYGRDYYRLPGGAYRGPGWEEEAKGRGRKGEGGGEEGRGGKEAVER 665
            MPRRVPLPWPWHPLLRYVSAGAASTFLAASSSRRIGMATTTTTTTVLSIFYLILSHSHSSTATLVDKRAGRGSTSGSRCSSSKRAFIQPSTPGRHLPKDHTGLYVGHEYMSHLSWPLGTKTRPCGGVRRCTSMGTPSQGEDLTANTGTFGENIPFAALGLSPWLTAALSGAGKATSTHIQALALPTILAGENVVIGSETGAGKTLAYLLPVMELAHRAHAARTAMKEKALAYYQERRGALKEGAGGRERVGEYSSLAEDYPWEAPFAIVLVPNGQLSEQVLRMAGEVLGQGEGEENVRVEALKGSVDVWPYRVGSRAAPDVLVCTPATLSSFDREVNLFGEVNILVVDEADMLLEGDYGRHLERILVAFKRADKLHTARSEPLTQYVLAAATLPSYGLKSVEELVKKRFPSAVRVHTDLMHKHHPQLTQVFVEAPEDLEGKIAMLLQVLEKLRTKGEEARRAEGGKEGGKEGEGEAQATILPKTMVFLNTATAAARTQIAVQAAGFPSVAFHKEVRREEREANLQRFRSNQVPLLVCTDLAARGLDIPDVRQVVQVEFAPNVVQHLHRIGRAVRAGREGRAVNFYDLGAHDLVESLQLAQADTLERSFSRQRGFRKKIKKYGRDYYRLPGGAYRGPGWEEEAKGRGRKGEGGGEEGRGGKEAVER
Sbjct:    1 MPRRVPLPWPWHPLLRYVSAGAASTFLAASSSRRIGMATTTTTTTVLSIFYLILSHSHSSTATLVDKRAGRGSTSGSRCSSSKRAFIQPSTPGRHLPKDHTGLYVGHEYMSHLSWPLGTKTRPCGGVRRCTSMGTPSQGEDLTANTGTFGENIPFAALGLSPWLTAALSGAGKATSTHIQALALPTILAGENVVIGSETGAGKTLAYLLPVMELAHRAHAARTAMKEKALAYYQERRGALKEGAGGRERVGEYSSLAEDYPWEAPFAIVLVPNGQLSEQVLRMAGEVLGQGEGEENVRVEALKGSVDVWPYRVGSRAAPDVLVCTPATLSSFDREVNLFGEVNILVVDEADMLLEGDYGRHLERILVAFKRADKLHTARSEPLTQYVLAAATLPSYGLKSVEELVKKRFPSAVRVHTDLMHKHHPQLTQVFVEAPEDLEGKIAMLLQVLEKLRTKGEEARRAEGGKEGGKEGEGEAQATILPKTMVFLNTATAAARTQIAVQAAGFPSVAFHKEVRREEREANLQRFRSNQVPLLVCTDLAARGLDIPDVRQVVQVEFAPNVVQHLHRIGRAVRAGREGRAVNFYDLGAHDLVESLQLAQADTLERSFSRQRGFRKKIKKYGRDYYRLPGGAYRGPGWEEEAKGRGRKGEGGGEEGRGGKEAVER 665          
BLAST of EWM29012.1 vs. NCBI_GenBank
Match: gi|298708697|emb|CBJ49194.1| (DEAD box helicase [Ectocarpus siliculosus])

HSP 1 Score: 343.199 bits (879), Expect = 2.837e-105
Identity = 200/490 (40.82%), Postives = 277/490 (56.53%), Query Frame = 0
Query:  149 FGENIPFAALGLSPWLTAALSGAGKATSTHIQALALPTILAGENVVIGSETGAGKTLAYLLPVMELAHRAHAARTAMKEKALAYYQERRGALKEGAGGRERVGEYSSLAEDYPWEAPFAIVLVPNGQLSEQVLRMAGEVLG--QGEGEENVRVEALKGSVDVWPYRVGSRAAPDVLVCTPATLSSFD--REVNLFGEVNILVVDEADMLLEGDYGRHLERILVAFKRADKLHT-----------ARSEPLTQYVLAAATLPSYGLKSVEELVKKRFPSAVRVHTDLMHKHHPQLTQVFVEAPEDLEGKIAMLLQVLEKLRTKGEEARRAEGGKEGGKEGEGEAQATILPKTMVFLNTATAAARTQIAVQAAGFPSVAFHKEVRREEREANLQRFRSNQVPLLVCTDLAARGLDIPDVRQVVQVEFAPNVVQHLHRIGRAVRAGREGRAVNFYDLGAHDLVESL-QLAQADTLERSFSRQRGFRKKIKKYG 622
            FG+ +PF+ LGLSP L   L   G   ST +QA A+P IL+GE++++G+ETG+GKTLAYLLP++E   R  A    + ++ L                          A  +P   P  +VLVPN +L +QV  +   +L     +G   V   A  GS   +P+   ++ AP +LVCTP+ L  +   + + LF +   LV+DEADML+EG Y + L+ ILVAF+RAD++              R    TQYVLAAATLP+YGLKSV++ +K+ FP+A ++    MH+HHP + Q FVE    +  KI  ++ +L    +  + +R                       TMVF NTA +  R   A+   GF  V +HK++   ER ANL   RS +  +LVCTDLAARG+D+P V  +VQ+E A NVVQHLHR+GRA RAGR G+A NFYD    DLV S+ ++ +   L+ SFSRQRGFR+K KKYG
Sbjct:  215 FGDRVPFSDLGLSPALCGHLEALGIGGSTAVQAAAVPGILSGEDMIVGAETGSGKTLAYLLPIVERVLRGQAVAKDLPDELLGN------------------------ARGWPM-FPDVVVLVPNKELCDQVHSVLKGILKALNADGITGVTAAAKYGSSYEYPFS-PNKPAPSILVCTPSFLHKYTNMKAIPLFCKATTLVLDEADMLMEGSYRKQLDDILVAFRRADRVMVEEGPIVDGRGRKRGIDKTQYVLAAATLPTYGLKSVDQYIKRAFPNARKIQQVHMHRHHPAIQQNFVEVGGQVFDKIQAVIDLLRDTVSDADTSR-----------------------TMVFTNTAASCKRAYEALAEEGFSVVPYHKDIVPLERLANLHALRSGRAKILVCTDLAARGIDVPSVTNIVQMEMATNVVQHLHRLGRAARAGRTGKATNFYDDLTKDLVNSITEVGEGSRLDGSFSRQRGFRRKFKKYG 655          
BLAST of EWM29012.1 vs. NCBI_GenBank
Match: gi|873234786|emb|CEM01595.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 308.145 bits (788), Expect = 1.507e-93
Identity = 205/515 (39.81%), Postives = 288/515 (55.92%), Query Frame = 0
Query:  137 SQGEDLTANTGTF---------GENIPFAALGLSPWLTAALSGAGKATSTHIQALALPTILAGENVVIGSETGAGKTLAYLLPVMELAHRAHAARTAMKEKALAYYQERRGALK--EGAGGRERVGEYSSLAEDYPWEAPFAIVLVPNGQLSEQVLRMAGEV---LGQGEGEENVRVEALKGSVDVWPYRVGSRAAPDVLVCTPATLSSFDR-----EVNLFGEVNILVVDEADMLLEGDYGRHLERILVAFKRADKLHTARSEPLTQYVLAAATLPSYGLKSVEELVKKRFPSAVRVHTDLMHKHHPQLTQVFVEAPEDLEGKIAMLLQVLEKLRTKGEEARRAEGGKEGGKEGEGEAQATILPKTMVFLNTATAAARTQIAVQAAGFPSVAFHKEVRREEREANLQRFRSNQVPLLVCTDLAARGLDIPDVRQVVQVEFAPNVVQHLHRIGRAVRAGREGRAVNFYDLGAHDLV----ESLQLAQ-----ADTLERSFSRQRGFRKKIKKYGR 623
            SQGE +T   G+F         GE +PF++L L P L   LS  GK T+T IQAL +P+IL G++V++G+ETG+GKTLAYL+P+++   R +               ER G  +  +G+GG            D     P A+V+VPN +L +QV R A E+   LG       V  E + G  + WP+   ++ APDVL+CTP  L  F +     +++LF  V+ LVVDEAD+LL+G Y + LE +L  F+R     + R    TQ+++ AATLP+ G  SV+  +++RFP A+RV   LMH+H P + Q F+  P   +      L +L    T+ +  R + GG+E    G          KT++F NT  +A     A+   G P V  H ++R  ER +NL  FR     +LVCTDLAARGLDIP +  V+Q +FAPNVV HLHR+GRA RAGR G A+NFY   + DLV    ESL++A+        LE++FSR R  RKK++K  R
Sbjct:   37 SQGESITGQAGSFDETSLDAFYGEYVPFSSLRLHPSLVQQLSQTGKDTATLIQALGIPSILTGDDVIVGAETGSGKTLAYLVPLLDRLLREN---------------EREGEAEASDGSGGNT----------DRSRMYPRAVVMVPNRELCDQVYRWAQELARPLG-------VTTEMVWGGYESWPF-TPAQPAPDVLICTPLFLGRFTKGGCVKDISLFQSVDTLVVDEADLLLDGGYKKDLEAVLTVFRR-----SGRQGAPTQHIMVAATLPNRGSGSVDAFLERRFPEALRVRNSLMHQHLPGMQQDFI--PIGYDASTRDRLNMLVDKVTEMQRDRASRGGEEAVDVG----------KTIIFANTVNSAKAVANALFDVGIPVVPCHADLRAAERISNLDAFRRGISSILVCTDLAARGLDIPRIATVIQFDFAPNVVAHLHRVGRAARAGRAGHAINFYGKDSEDLVSMIQESLKVAEERGSDGGLLEQAFSRNRSLRKKLRKQER 501          
BLAST of EWM29012.1 vs. NCBI_GenBank
Match: gi|219119017|ref|XP_002180275.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408532|gb|EEC48466.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 244.973 bits (624), Expect = 1.711e-67
Identity = 187/537 (34.82%), Postives = 263/537 (48.98%), Query Frame = 0
Query:  155 FAALGL-SPWLTAALSGAGKATSTHIQALALPTILAGE-NVVIGSETGAGKTLAYLLPVME--LAHRAHAARTAMKEKALAYYQERRGALKEGAGGRERVGEYSSLAEDYPWEAPFAIVLVPNGQLSEQVLRMAGEVLGQGE-----------------------GEENVRVEALKGSV----DVWPYRV-----GSRAAPDVLVCTPATLSSFDRE---VNLFGEVNILVVDEADMLLEGDYGRHLERILVAFKRADKLHTARSEPLTQYVLAAATLPSYGLKSVEELVKKRFPSAVRVHTDLMH--KHHPQLTQVFVEAPEDLEGKIAMLLQVLEKLRTKGEEARRAEGGKEGGKEGEGEAQATILPKTMVFLNTATAAARTQIAVQAAGFPSVAFHKEVRREEREANLQRFR---------SNQVPLLVCTDLAARGLDIPDVRQVVQVEFAPNVVQHLHRIGRAVRAG-REGRAVNFYDLGAHDLVESLQLA--------------------QADTLERSFSRQRGFRKKIKK 620
            FA+LG+ SP L   +   G    T +QA A   I A E +V++G+ETG GKTLAYLLP+++  L  +A+AA T                              +SL  DY      AI+LVPN +L +QV+RMA  + G  +                        ++ VR+  L G +    D  P+R      GS    D+++ T A L     +   +++FG++  LVVDEADMLL+G Y R LE +L+ F+RAD+L      P TQ+V  AATLP +G +SV+  +KK+FP   +V    MH  +H+    Q      E  + ++  L+++     T            EGG + E         K MVFLN+         A+Q AG   + +H +V  +ER A L RFR            VP+LVC+DLAARG+D+P V  VVQ++FA NVV HLHR+GR  RAG R GR + FYD    +LVE +Q A                    Q  +++ +FSR+RGF KK KK
Sbjct:   92 FASLGIQSPVLLERIEALGLRRPTAVQAAAYRDISAAEGDVMVGAETGTGKTLAYLLPLLDDILQRKANAADTN-----------------------------TSLGYDYAR----AIILVPNKELVQQVVRMAVSLSGGRQSLVYGGSALPDAANLPPTDDATLAKDTVRLAILPGGLRELQDFQPFRKAIGLGGSEPPVDLVISTLAALGVLGLKPANIDMFGDIRTLVVDEADMLLDGGYIRPLENVLMGFRRADRLDPTLGVPRTQHVFVAATLPDFGTRSVDAYLKKKFPYVSQVTMAGMHNARHYGLREQTLWMEEESKKTRMEKLVELFGTPVT------------EGGLQDE---------KVMVFLNSVDDVEGANQALQRAGLKVLPYHAKVSLDERTATLDRFRRYDPKSPDGEGTVPILVCSDLAARGIDVPGVNTVVQLQFAGNVVAHLHRMGRCGRAGQRTGRGIVFYDAKERELVEVVQQAEIQQNRMVLPGDVIELAGDEQDGSVKNAFSRKRGFSKKRKK 574          
BLAST of EWM29012.1 vs. NCBI_GenBank
Match: gi|675132072|ref|XP_008887923.1| (DEAD/DEAH box helicase domain-containing protein [Hammondia hammondi] >gi|661333359|gb|KEP61516.1| DEAD/DEAH box helicase domain-containing protein [Hammondia hammondi])

HSP 1 Score: 242.662 bits (618), Expect = 3.766e-67
Identity = 167/492 (33.94%), Postives = 249/492 (50.61%), Query Frame = 0
Query:  143 TANTGTFGENIPFAALGLSPWLTAALSGAGKATSTHIQALALPTILAGENVVIGSETGAGKTLAYLLPVMELAHRAHAARTAMKEKALAYYQERRGALKEGAGGRERVGEYSSLAEDYPWEAPFAIVLVPNGQLSEQVLRMAGEVLGQGEGEENVRVEALKGSVDVWPY-RVGSRAAPDVLVCTPATLSSF-----DREVNLFGEVNILVVDEADMLLEGDYGRHLERILVAFKRADKLHTARSEPLTQYVLAAATLPSYGLKSVEELVKKRFPSAVRVHTDLMHKHHPQLTQVFVEAP---EDLEGKIAMLLQVLEKLRTKGEEARRAEGGKEGGKEGEGEAQATILPKTMVFLNTATAAARTQIAVQAAGFPSV---AFHKEVRREEREANLQRFRSNQVPLLVCTDLAARGLDIPDVRQVVQVEFAPNVVQHLHRIGRAVRAGREGRAVNFYDLGAHDLVESLQLAQADTLERS----FSRQRGFRKKI 618
            T   G  G  + F  LG+ P    AL   G   +T IQ L++P IL G + VIG+ETG+GKTL Y++ +++           + +K +   +E    L++                  P   P+A+V+VP  +L+ QV+  A  +  +      +  + + G+   WP+  +    +PD++VCTP  L+ F      +++  F E+ +L +DEADMLLEG Y + +E I  AF+RAD+      +  TQY+ AAAT+P  G KSV +++ +  P A    TD +H+H  QL Q FV+ P    D E ++++LL  L+KL           GG +               K M+F NTA   AR+         P+     F  E+ +++R  NL  F   +  LLVCTD A+RGLDI  V  VVQ +FA + V HLHR+GR  R  + GRA+NFY      LV+ +Q A  D +  S    FSR+R FRKK+
Sbjct:  217 TTADGHSGGRLVFPRLGVFPDFVEALGNFGVRQATEIQQLSIPAILEGRDTVIGAETGSGKTLGYVVGLVQ---------NILLQKMIHEKKEDAAVLQKAD-------------LPIPRHHPYAVVIVPTRELALQVVAWARRLCRKTP----ITAQLMLGTYTRWPFGTLAIPTSPDLVVCTPPVLAPFVKGGHAKDLTPFREIQMLALDEADMLLEGGYRQTMEGIFTAFRRADRQSAESGKRRTQYIFAAATIPDRGPKSVRKVISRLCPRATFFCTDSLHQHREQLQQEFVQVPAGASDDE-RLSLLLHRLKKL-----------GGND---------------KVMIFCNTAQ-TARSLFEALEKALPTTRPKLFSSEIDQKDRSFNLGLFARGKSRLLVCTDAASRGLDIAGVSLVVQYDFALSAVAHLHRVGRVARGEQPGRALNFYFDTQKALVDVIQRAARDPVSPSVADAFSRKRSFRKKL 654          
BLAST of EWM29012.1 vs. NCBI_GenBank
Match: gi|820692822|tpe|CEL68564.1| (TPA: RNA helicase, putative [Neospora caninum Liverpool])

HSP 1 Score: 242.662 bits (618), Expect = 5.248e-67
Identity = 163/485 (33.61%), Postives = 249/485 (51.34%), Query Frame = 0
Query:  150 GENIPFAALGLSPWLTAALSGAGKATSTHIQALALPTILAGENVVIGSETGAGKTLAYLLPVMELAHRAHAARTAMKEKALAYYQERRGALKEGAGGRERVGEYSSLAEDYPWEAPFAIVLVPNGQLSEQVLRMAGEVLGQGEGEENVRVEALKGSVDVWPY-RVGSRAAPDVLVCTPATLSSF-----DREVNLFGEVNILVVDEADMLLEGDYGRHLERILVAFKRADKLHTARSEPLTQYVLAAATLPSYGLKSVEELVKKRFPSAVRVHTDLMHKHHPQLTQVFVEAPEDL--EGKIAMLLQVLEKLRTKGEEARRAEGGKEGGKEGEGEAQATILPKTMVFLNTATAAARTQIAVQAAGFPSV---AFHKEVRREEREANLQRFRSNQVPLLVCTDLAARGLDIPDVRQVVQVEFAPNVVQHLHRIGRAVRAGREGRAVNFYDLGAHDLVESLQLAQADTLERS----FSRQRGFRKKIK 619
            G+ + F  LG+ P    AL   G   +T IQ L++P IL G + VIG+ETG+GKTL Y++ +++           + +K +   +E    L++           + L    P   P+A+V+VP  +L+ QV+  A  +  +      +  + + G+   WP+  +    +PD++VCTP  L+ F      +++  F E+ +L +DEADMLLEG Y + +E I  AF+RAD+   A     TQY+ AAAT+P  G KSV +++ +  P A    T+ +H+H  QL Q FVE P  +  + ++ +LL  L+KL           GG +               K M+F NTA   AR+         P+     F  E+ +++R  NL  F   +  +LVCTD A+RGLDI  V  VVQ +FA + V HLHR+GR  R    GRA+NFY      LV+ ++ A  D +  S    FSR+R FRKK++
Sbjct:  227 GDRLVFPRLGVFPDFVEALDNFGVRQATEIQQLSIPAILEGRDTVIGAETGSGKTLGYVVGLVQ---------NILLQKMIHEKKEDAAVLQK-----------TELP--IPRHHPYAVVIVPTRELALQVVAWARRLCRKSP----ITAQLMLGTYTRWPFGTLAIPTSPDLVVCTPPVLAPFVKGGHAKDLTPFREIQMLALDEADMLLEGGYRQAMEGIFTAFRRADRQSAASGRRRTQYIFAAATIPDRGPKSVRKIISRLCPRATFFCTESLHQHREQLQQEFVEVPAGISDDERVNLLLSRLKKL-----------GGDD---------------KVMIFCNTAQ-IARSLFEALEKALPTTRPKLFSSEIDQKDRSFNLGLFARGKSRILVCTDAASRGLDIAGVTLVVQYDFALSAVAHLHRVGRVARGEHPGRALNFYFDSQRALVDVIRRAARDPVSPSVADAFSRKRSFRKKLR 658          
BLAST of EWM29012.1 vs. NCBI_GenBank
Match: gi|1210525220|dbj|GAX15979.1| (hypothetical protein FisN_22Hh166 [Fistulifera solaris])

HSP 1 Score: 236.113 bits (601), Expect = 4.768e-66
Identity = 176/524 (33.59%), Postives = 265/524 (50.57%), Query Frame = 0
Query:  164 LTAALSGAGKATSTHIQALALPTILAGENVVIGSETGAGKTLAYLLPVMELAHRAHAARTAMKEKALAYYQERRGALKEGAGGRERVGEYSSLAEDYPWEAPFAIVLVPNGQLSEQVLRMA-------------GEVLGQGEGEEN--VRVEALKGSV----DVWPYRVGSRAAPDVLVCTPATLSSF---DREVNLFGEVNILVVDEADMLLEGDYGRHLERILVAFKRADK-LHTARSEPLTQYVLAAATLPSYGLKSVEELVKKRFPSAVRVHTDLMH--KHHPQLTQVFVEAPEDLEGKIAMLLQVLEKLRTKGEEARRAEGGKEGGKEGEGEAQATILPKTMVFLNTATAAARTQIAVQAAGFPSVAFHKEVRREEREANLQRFRSN----QVPLLVCTDLAARGLDIPDVRQVVQVEFAPNVVQHLHRIGRAVRAG--REGRAVNFYDLGAHDLVESLQLA---------QADTLE------------------------RSFSRQRGFRKKIKKYGR 623
            L + L    ++  + IQ+LA  ++  G NV++G+ETG GKTLAYLLP M                  A  +ER   L + +   + V  ++            A+VLVPN +L +QV+RMA             G+VL + + +++  +R+  L G +    D  P+R  ++   D++V TPA L  +    + V +F ++  L+VDEADMLL+G Y R LE++L+ F+RAD+ +H+    P TQYV  AATLP  GL+SV+  +KK+FPSA  + T  +H  KH   L   ++     LE K   +  V+E L         ++  ++ G EGE         K M+FLN+         A+Q AG   + +H ++  +ER   L+ FR +    Q  +LVCTDLA+RGLD+PDV  V+Q++FA NVV HLHR+GR  R    ++GR + F+      LV  ++ A         Q D +E                        ++FSR+RGF KK KK  R
Sbjct:   52 LQSELPTIYRSGPSEIQSLAFSSVQEGRNVILGAETGTGKTLAYLLPWMN-----------------AVLEER---LTKDSNQWDAVQAFAK-----------AVVLVPNKELVQQVVRMALPLAGGPSALVYDGKVLQENDNDDDSLIRLAVLPGGMDEPNDFAPFRRCTKPL-DLIVSTPAALGPWALNPKHVAIFADIQSLIVDEADMLLDGGYVRALEQVLMGFRRADRTIHSTEQRP-TQYVFVAATLPDSGLRSVDAYLKKKFPSAEYITTANLHNAKHEGLLETQWIA----LESKQERMKAVVEML---------SQHQQQQGSEGE---------KIMIFLNSVQDVENASAALQRAGVSVLRYHAKLNLQERTETLEAFRQSTANGQSSILVCTDLASRGLDVPDVTLVIQLQFATNVVTHLHRMGRCGRRNHSKKGRGIIFFSEQEEPLVNVVRQAEEQQEKMTLQQDVMEELTDDFDADENASQPSPSDLAKVQQAFSRKRGFTKKRKKLRR 520          
BLAST of EWM29012.1 vs. NCBI_GenBank
Match: gi|1210529948|dbj|GAX11481.1| (hypothetical protein FisN_22Lh166 [Fistulifera solaris])

HSP 1 Score: 233.032 bits (593), Expect = 5.344e-65
Identity = 173/523 (33.08%), Postives = 258/523 (49.33%), Query Frame = 0
Query:  164 LTAALSGAGKATSTHIQALALPTILAGENVVIGSETGAGKTLAYLLPVMELAHRAHAARTAMKEKALAYYQERRGALKEGAGGRERVGEYSSLAEDYPWEAPFAIVLVPNGQLSEQVLRMA-------------GEVLGQGEGEEN-VRVEALKGSVD----VWPYRVGSRAAPDVLVCTPATLSSF---DREVNLFGEVNILVVDEADMLLEGDYGRHLERILVAFKRADK-LHTARSEPLTQYVLAAATLPSYGLKSVEELVKKRFPSAVRVHTDLMH--KHHPQLTQVFVEAPEDLEGKIAMLLQVLEKLRTKGEEARRAEGGKEGGKEGEGEAQATILPKTMVFLNTATAAARTQIAVQAAGFPSVAFHKEVRREEREANLQRFRSN----QVPLLVCTDLAARGLDIPDVRQVVQVEFAPNVVQHLHRIGRAVRAG--REGRAVNFYDLGAHDLVESLQLA---------QADTLE------------------------RSFSRQRGFRKKIKKYGR 623
            L + L    ++  + IQ+LA  ++  G NV++G+ETG GKTLAYLLP M       A   + +  A+  Y +                               A+VLVPN +L +QV+RMA             G+VL + + +++ +R+  L G +D      P+R  ++   D++V TPA L  +    + V  F ++  L+VDEADMLL+G Y R LE++L+ F+RAD+ +H+    P TQYV  AATLP  GL+SV+  +KK+FPSA  + T  +H  KH   L   ++     LE K   +  V+E L    ++            + +GE       K M+FLN+         A+Q AG   + +H ++  +ER   L+ FR +    Q  +LVCTDLA+RGLD+PDV  V+Q++FA NVV HLHR+GR  R    ++GR + FY      LV  ++ A         Q D +E                        ++FSR+RGF KK KK  R
Sbjct:   52 LQSELPTIYRSGPSEIQSLAFSSLQEGRNVILGAETGTGKTLAYLLPWMNAVLEERARTNSSQWDAVQAYAK-------------------------------AVVLVPNKELVQQVVRMALPLAGGPSALMYDGKVLQENDEDDSLIRLAVLPGGMDEPNDFAPFRRCTKPL-DLIVSTPAALGPWALNPKHVAFFADIQTLIVDEADMLLDGGYVRALEQVLMGFRRADRTIHSTEQRP-TQYVFVAATLPDSGLRSVDAYLKKKFPSAEYITTANLHNAKHEGLLETQWIA----LESKQERMKAVVEMLSLHQQQ-----------HDTDGE-------KIMIFLNSVQDVENASAALQRAGISVLKYHAKLNLQERTETLETFRQSTAKGQSSILVCTDLASRGLDVPDVTLVIQLQFATNVVTHLHRMGRCGRRNHSKKGRGIIFYSEKEEPLVNVVRQAEEQQEKMILQQDVMEELTDYSDAEENVTQPLSSDLAKVQQAFSRKRGFTKKRKKLRR 519          
BLAST of EWM29012.1 vs. NCBI_GenBank
Match: gi|672299033|gb|KFG62871.1| (DEAD/DEAH box helicase domain-containing protein [Toxoplasma gondii RUB])

HSP 1 Score: 233.032 bits (593), Expect = 1.378e-63
Identity = 164/501 (32.73%), Postives = 248/501 (49.50%), Query Frame = 0
Query:  133 MGTPSQGEDLTANT-GTFGENIPFAALGLSPWLTAALSGAGKATSTHIQALALPTILAGENVVIGSETGAGKTLAYLLPVMELAHRAHAARTAMKEKALAYYQERRGALKEGAGGRERVGEYSSLAEDYPWEAPFAIVLVPNGQLSEQVLRMAGEVLGQGEGEENVRVEALKGSVDVWPY-RVGSRAAPDVLVCTPATLSSF-----DREVNLFGEVNILVVDEADMLLEGDYGRHLERILVAFKRADKLHTARSEPLTQYVLAAATLPSYGLKSVEELVKKRFPSAVRVHTDLMHKHHPQLTQVFVEAPEDLEGKIAMLLQVLEKLRTKGEEARRAEGGKEGGKEGEGEAQATILPKTMVFLNTATAAARTQIAVQAAGFPSV---AFHKEVRREEREANLQRFRSNQVPLLVCTDLAARGLDIPDVRQVVQVEFAPNVVQHLHRIGRAVRAGREGRAVNFYDLGAHDLVESLQLAQAD----TLERSFSRQRGFRKKIK 619
            +G  S  E  TA   G  G  + F  LG+ P    AL   G   +T IQ L++P IL G + VIG+ETG+GKTL Y++ +++           + +K +   +E    L++                  P   P+A+V+VP  +L+ QV+  A  +  +      V  + + G+   WP+  +    +PD++VCTP  L+ F      +++  F E+ +L +DEADMLLEG Y + +E I  AF+RAD+      +  TQY+ AAAT+P  G KSV +++ +  P A    TD +H+H  QL Q FV+ P                     ++ R +       K G  +       K M+F NTA   AR+         P+     F  E+ +++R  NL  F   +  +LVCTD A+RGLDI  V  VVQ +FA + V HLHR+GR  R  + GRA+NFY      LV+ +Q A  D    ++  +FSR+R FRKK++
Sbjct:  205 LGCVSSTEIRTATADGHSGGRLVFPRLGVFPDFVEALGNFGVRQATDIQQLSIPAILEGRDTVIGAETGSGKTLGYVVGLVQ---------NILLQKMIHEKKEDAAVLQKAD-------------LPIPRHHPYAVVIVPTRELALQVVAWARRLCRKTP----VTAQLMLGTYTRWPFGTLAIPTSPDLVVCTPPVLAPFVKGGHAKDLTPFREIQMLALDEADMLLEGGYRQAMEGIFTAFRRADRQSAESGKRRTQYIFAAATIPDRGPKSVRKVISRLCPRATFFCTDSLHQHREQLQQEFVQVPAG-----------------ASDDERVSLLLSRLKKLGGSD-------KVMIFCNTAQ-TARSLFEALEKALPTTRPKLFSSEIDQKDRSFNLGLFARGKSRVLVCTDAASRGLDIAGVTLVVQYDFALSAVAHLHRVGRVARGEQPGRALNFYYDAQKALVDVIQRAARDPVSPSVAEAFSRKRSFRKKLE 654          
BLAST of EWM29012.1 vs. NCBI_GenBank
Match: gi|672574100|gb|KFH12674.1| (DEAD/DEAH box helicase domain-containing protein [Toxoplasma gondii VAND])

HSP 1 Score: 232.261 bits (591), Expect = 2.199e-63
Identity = 165/501 (32.93%), Postives = 247/501 (49.30%), Query Frame = 0
Query:  133 MGTPSQGEDLTANT-GTFGENIPFAALGLSPWLTAALSGAGKATSTHIQALALPTILAGENVVIGSETGAGKTLAYLLPVMELAHRAHAARTAMKEKALAYYQERRGALKEGAGGRERVGEYSSLAEDYPWEAPFAIVLVPNGQLSEQVLRMAGEVLGQGEGEENVRVEALKGSVDVWPY-RVGSRAAPDVLVCTPATLSSF-----DREVNLFGEVNILVVDEADMLLEGDYGRHLERILVAFKRADKLHTARSEPLTQYVLAAATLPSYGLKSVEELVKKRFPSAVRVHTDLMHKHHPQLTQVFVEAPEDLEGKIAMLLQVLEKLRTKGEEARRAEGGKEGGKEGEGEAQATILPKTMVFLNTATAAARTQIAVQAAGFPSV---AFHKEVRREEREANLQRFRSNQVPLLVCTDLAARGLDIPDVRQVVQVEFAPNVVQHLHRIGRAVRAGREGRAVNFYDLGAHDLVESLQLAQADTLERS----FSRQRGFRKKIK 619
            +G  S  E  TA   G  G  + F  LG+ P    AL   G   +T IQ L++P IL G + VIG+ETG+GKTL Y++ +++           + +K +   +E    L++                  P   P+A+V+VP  +L+ QV+  A  +  +      V  + + G+   WP+  +    +PD++VCTP  L+ F      +++  F E+ +L +DEADMLLEG Y + +E I  AF+RAD+      +  TQY+ AAAT+P  G KSV +++ +  P A    TD +H+H  QL Q FV+ P                     ++ R +       K G  +       K M+F NTA   AR+         P+     F  E+ +++R  NL  F   +  +LVCTD A+RGLDI  V  VVQ +FA + V HLHR+GR  R  + GRA+NFY      LV+ +Q A  D +  S    FSR+R FRKK++
Sbjct:  205 LGCVSSTEIRTATADGHSGGRLVFPRLGVFPDFVEALGNFGVRQATDIQQLSIPAILEGRDTVIGAETGSGKTLGYVVGLVQ---------NILLQKMIHEKKEDAAVLQKAD-------------LPIPRHHPYAVVIVPTRELALQVVAWARRLCRKTP----VTAQLMLGTYTRWPFGTLAIPTSPDLVVCTPPVLAPFVKGGHAKDLTPFREIQMLALDEADMLLEGGYRQAMEGIFTAFRRADRQSAESGKRRTQYIFAAATIPDRGPKSVRKVISRLCPRATFFCTDSLHQHREQLQQEFVQVPAG-----------------ASDDERVSLLLSRLKKLGGSD-------KVMIFCNTAQ-TARSLFEALEKALPTTRPKLFSSEIDQKDRSFNLGLFARGKSRVLVCTDAASRGLDIAGVTLVVQYDFALSAVAHLHRVGRVARGEQPGRALNFYYDTQKALVDVIQRAARDPVSPSVADAFSRKRSFRKKLE 654          
The following BLAST results are available for this feature:
BLAST of EWM29012.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111523|gb|EWM29012.1|0.000e+0100.00RNA helicase DEAD-box type [Nannochloropsis gadita... [more]
gi|298708697|emb|CBJ49194.1|2.837e-10540.82DEAD box helicase [Ectocarpus siliculosus][more]
gi|873234786|emb|CEM01595.1|1.507e-9339.81unnamed protein product [Vitrella brassicaformis C... [more]
gi|219119017|ref|XP_002180275.1|1.711e-6734.82predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|675132072|ref|XP_008887923.1|3.766e-6733.94DEAD/DEAH box helicase domain-containing protein [... [more]
gi|820692822|tpe|CEL68564.1|5.248e-6733.61TPA: RNA helicase, putative [Neospora caninum Live... [more]
gi|1210525220|dbj|GAX15979.1|4.768e-6633.59hypothetical protein FisN_22Hh166 [Fistulifera sol... [more]
gi|1210529948|dbj|GAX11481.1|5.344e-6533.08hypothetical protein FisN_22Lh166 [Fistulifera sol... [more]
gi|672299033|gb|KFG62871.1|1.378e-6332.73DEAD/DEAH box helicase domain-containing protein [... [more]
gi|672574100|gb|KFH12674.1|2.199e-6332.93DEAD/DEAH box helicase domain-containing protein [... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1664rna1664Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications