EWM30475.1, cds164 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30475.1 vs. NCBI_GenBank
Match: gi|585113139|gb|EWM30475.1| (FAM92 protein [Nannochloropsis gaditana]) HSP 1 Score: 503.056 bits (1294), Expect = 4.420e-180 Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0 Query: 1 MDEKGRVLQGRLDFCERNVTTLRQGVRALLRNHDEGCNVTMDLSQKVRDTAAQEQFIDLQEDLIAIAECTKRLAEERRTIMCERAEERVISTFDLILSRVLHPTRLLLKDRERALRKFRAMERKITFSGEQTLLSMLNLEDDADTKQQKLANYSECAKHTDEVVDSNFRCFEKSRVLEMKAMLEETLRAEMLYHCRALEILEPLCVSMRRLDPDEAMASMTQELDELNTAEDENNGQSKRAHMRGRNRC 249 MDEKGRVLQGRLDFCERNVTTLRQGVRALLRNHDEGCNVTMDLSQKVRDTAAQEQFIDLQEDLIAIAECTKRLAEERRTIMCERAEERVISTFDLILSRVLHPTRLLLKDRERALRKFRAMERKITFSGEQTLLSMLNLEDDADTKQQKLANYSECAKHTDEVVDSNFRCFEKSRVLEMKAMLEETLRAEMLYHCRALEILEPLCVSMRRLDPDEAMASMTQELDELNTAEDENNGQSKRAHMRGRNRC Sbjct: 1 MDEKGRVLQGRLDFCERNVTTLRQGVRALLRNHDEGCNVTMDLSQKVRDTAAQEQFIDLQEDLIAIAECTKRLAEERRTIMCERAEERVISTFDLILSRVLHPTRLLLKDRERALRKFRAMERKITFSGEQTLLSMLNLEDDADTKQQKLANYSECAKHTDEVVDSNFRCFEKSRVLEMKAMLEETLRAEMLYHCRALEILEPLCVSMRRLDPDEAMASMTQELDELNTAEDENNGQSKRAHMRGRNRC 249
BLAST of EWM30475.1 vs. NCBI_GenBank
Match: gi|553191943|ref|XP_005855488.1| (hypothetical protein NGA_2122420, partial [Nannochloropsis gaditana CCMP526] >gi|553193906|ref|XP_005855858.1| hypothetical protein NGA_2122410, partial [Nannochloropsis gaditana CCMP526] >gi|422293207|gb|EKU20507.1| hypothetical protein NGA_2122410, partial [Nannochloropsis gaditana CCMP526] >gi|422293575|gb|EKU20875.1| hypothetical protein NGA_2122420, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 150.984 bits (380), Expect = 1.562e-43 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0 Query: 40 TMDLSQKVRDTAAQEQFIDLQEDLIAIAECTKRLAEERRTIMCERAEERVISTFDLILSRVLHPTRLLLKDRERALR 116 TMDLSQKVRDTAAQEQFIDLQEDLIAIAECTKRLAEERRTIMCERAEERVISTFDLILSRVLHPTRLLLKDRERALR Sbjct: 1 TMDLSQKVRDTAAQEQFIDLQEDLIAIAECTKRLAEERRTIMCERAEERVISTFDLILSRVLHPTRLLLKDRERALR 77
BLAST of EWM30475.1 vs. NCBI_GenBank
Match: gi|298710381|emb|CBJ25445.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 93.9745 bits (232), Expect = 1.145e-20 Identity = 48/125 (38.40%), Postives = 78/125 (62.40%), Query Frame = 0 Query: 1 MDEKGRVLQGRLDFCERNVTTLRQGVRALLRNHDEGCNVTMDLSQKVRDTAAQEQFIDLQEDLIAIAECTKRLAEERRTIMCERAEERVISTFDLILSRVLHPTRLLLKDRERALRKFRAMERKI 125 +DEKGR L GRL+F +RNV L + + + +H +G + S K++ AAQE F DLQ+ L+ +AE T+R++ ER+ IM +RA+ +V++ I V+ PT+ LL+DR+ ++ E K+ Sbjct: 3 LDEKGRRLHGRLEFFDRNVAQLIRHISQTVGHHQDGVKHGISFSTKIKTIAAQEPFADLQDRLVGLAEITERISLERKNIMIDRAKSQVLNKLADIKKTVIAPTQALLQDRDSCVKALVKAEEKM 127
BLAST of EWM30475.1 vs. NCBI_GenBank
Match: gi|695403790|ref|XP_009523371.1| (hypothetical protein PHYSODRAFT_491292 [Phytophthora sojae] >gi|348680838|gb|EGZ20654.1| hypothetical protein PHYSODRAFT_491292 [Phytophthora sojae]) HSP 1 Score: 82.8037 bits (203), Expect = 1.672e-15 Identity = 61/225 (27.11%), Postives = 110/225 (48.89%), Query Frame = 0 Query: 1 MDEKGRVLQGRLDFCERNVTTLRQGVRALLRNHDEGCNVTMDLSQKVRDTAAQEQFIDLQEDLIAIAECTKRLAEERRTIMCERAEERVISTFDLILSRVLHPTRLLLKDRERALRKFRAMERKITFSGEQTLLSMLNLEDDADTKQQKLANYSECAKHTDEV---VDSNFRCFEKSRVLEMKAMLEETLRAEMLYHCRALEILEPLCVSMRRLDPDEAMASMTQ 222 M ++ R LQ +L F ERN L + V +++ +E ++ + D AAQE+ L L ++ EC ++LA E +M R E ++ I + P + LL+DRE+A++ +E K+ Q L A K++KL S+ + + V +D++ F++ R+ +MK ++ E R+ YH + LE+ C ++ +L P + + TQ Sbjct: 1 MGQRERSLQAQLQFMERNGRALEELVAKMMKVREEQEAFLGAFARSLEDIAAQEECAPLARCLGSLGECGQKLATESHDVMLLRPETEILQVVTQIQDWAIVPMKRLLEDREKAIK----IEAKL-----QKEYDELRRGSSAKEKEKKLRMLSDQKRRVENVNALLDTHMENFDRYRIQKMKKIVSELARSHAFYHAKGLELFAGPCETIAKLHPSDTVKVTTQ 216
BLAST of EWM30475.1 vs. NCBI_GenBank
Match: gi|1214668970|gb|OWY94400.1| (hypothetical protein PHMEG_00035889 [Phytophthora megakarya]) HSP 1 Score: 81.2629 bits (199), Expect = 4.602e-15 Identity = 57/216 (26.39%), Postives = 108/216 (50.00%), Query Frame = 0 Query: 1 MDEKGRVLQGRLDFCERNVTTLRQGVRALLRNHDEGCNVTMDLSQKVRDTAAQEQFIDLQEDLIAIAECTKRLAEERRTIMCERAEERVISTFDLILSRVLHPTRLLLKDRERALRKFRAMERKITFSGEQTLLSMLNLEDDADTKQQKLANYSECAKHTDEVVDSNFRCFEKSRVLEMKAMLEETLRAEMLYHCRALEILEPLCVSMRRLDPDEA 216 M+++GR L +L F ERN L + V +L+ +E + ++ V D AAQE+ L + L ++ E ++LA E +M R E ++ I + P + LL+DRE+A++ +E K+ E L N + + K + L++ ++ + ++D++ F++ R+ +MK +L E R+ YH + LE+ C ++ +A Sbjct: 1 MEQRGRTLAAQLQFMERNSRALEELVAKMLKAREEQETFLVAFAKSVEDIAAQEECTGLAKCLGSLGESGQKLASESHDVMMLRPETEILQVVTQIQDWAIVPMKRLLEDREKAMK----IEAKL--QKEYDELKRGNTAKEKEKKLRMLSDQKRRVENVNTLLDAHMENFDRYRIQKMKKILSELARSMAFYHAKGLELFAVPCQTIANFHTTDA 210
BLAST of EWM30475.1 vs. NCBI_GenBank
Match: gi|566033829|gb|ETI56740.1| (hypothetical protein F443_00812 [Phytophthora parasitica P1569]) HSP 1 Score: 80.1073 bits (196), Expect = 1.473e-14 Identity = 60/225 (26.67%), Postives = 109/225 (48.44%), Query Frame = 0 Query: 1 MDEKGRVLQGRLDFCERNVTTLRQGVRALLRNHDEGCNVTMDLSQKVRDTAAQEQFIDLQEDLIAIAECTKRLAEERRTIMCERAEERVISTFDLILSRVLHPTRLLLKDRERALRKFRAMERKITFSGEQTLLSMLNLEDDADTKQQKLANYSECAKHTDEV---VDSNFRCFEKSRVLEMKAMLEETLRAEMLYHCRALEILEPLCVSMRRLDPDEAMASMTQ 222 M+++GR +L F ERN L + V +++ +E ++ + D AAQE+ L + L ++ EC ++L E +M R E V+ I + P + LL+DRE+A++ +E K+ Q L A K++KL S+ + + V +D++ F++ R+ +MK ++ E R++ YH + LE+ C + +L EA+ Q Sbjct: 1 MEQRGRTFAAQLQFMERNGRALEELVAKMMKAREEQEAFLGSFAKSLEDIAAQEECEPLAQCLGSLGECGQKLVSESHDVMMLRPEMEVLQVVTQIQDWAIVPMKRLLEDREKAIK----IEAKL-----QKEYDELRRGSSAKEKEKKLRMLSDQKRRVENVNALLDTHMDNFDRYRIQKMKKIVSELARSQAFYHAKGLELFAVPCQDIAKLQSTEAVKRTPQ 216
BLAST of EWM30475.1 vs. NCBI_GenBank
Match: gi|570337524|gb|ETO85472.1| (hypothetical protein F444_00832 [Phytophthora parasitica P1976]) HSP 1 Score: 79.7221 bits (195), Expect = 2.108e-14 Identity = 60/225 (26.67%), Postives = 109/225 (48.44%), Query Frame = 0 Query: 1 MDEKGRVLQGRLDFCERNVTTLRQGVRALLRNHDEGCNVTMDLSQKVRDTAAQEQFIDLQEDLIAIAECTKRLAEERRTIMCERAEERVISTFDLILSRVLHPTRLLLKDRERALRKFRAMERKITFSGEQTLLSMLNLEDDADTKQQKLANYSECAKHTDEV---VDSNFRCFEKSRVLEMKAMLEETLRAEMLYHCRALEILEPLCVSMRRLDPDEAMASMTQ 222 M+++GR +L F ERN L + V +++ +E ++ + D AAQE+ L + L ++ EC ++L E +M R E V+ I + P + LL+DRE+A++ +E K+ Q L A K++KL S+ + + V +D++ F++ R+ +MK +L E R++ YH + LE+ C + +L +A+ Q Sbjct: 1 MEQRGRTFAAQLQFMERNGRALEELVAKMMKAREEQEAFLGSFAKSLEDIAAQEECEPLAQCLGSLGECGQKLVSESHDVMMLRPEMEVLQVVTQIQDWAIVPMKRLLEDREKAIK----IEAKL-----QKEYDELRRGSSAKEKEKKLRMLSDQKRRVENVNALLDTHMDNFDRYRIQKMKKILSELARSQAFYHAKGLELFAVPCQDIAKLQSTDAVKRTPQ 216
BLAST of EWM30475.1 vs. NCBI_GenBank
Match: gi|675162999|ref|XP_008890384.1| (hypothetical protein PPTG_00691 [Phytophthora parasitica INRA-310] >gi|567971519|gb|ETK96525.1| hypothetical protein L915_00763 [Phytophthora parasitica] >gi|567999844|gb|ETL49877.1| hypothetical protein L916_00756 [Phytophthora parasitica] >gi|568029029|gb|ETM02961.1| hypothetical protein L917_00727 [Phytophthora parasitica] >gi|568059644|gb|ETM56216.1| hypothetical protein L914_00743 [Phytophthora parasitica] >gi|568109702|gb|ETN24309.1| hypothetical protein PPTG_00691 [Phytophthora parasitica INRA-310] >gi|570961531|gb|ETP26510.1| hypothetical protein F441_00805 [Phytophthora parasitica CJ01A1] >gi|570998298|gb|ETP54546.1| hypothetical protein F442_00775 [Phytophthora parasitica P10297]) HSP 1 Score: 78.5666 bits (192), Expect = 5.563e-14 Identity = 59/225 (26.22%), Postives = 109/225 (48.44%), Query Frame = 0 Query: 1 MDEKGRVLQGRLDFCERNVTTLRQGVRALLRNHDEGCNVTMDLSQKVRDTAAQEQFIDLQEDLIAIAECTKRLAEERRTIMCERAEERVISTFDLILSRVLHPTRLLLKDRERALRKFRAMERKITFSGEQTLLSMLNLEDDADTKQQKLANYSECAKHTDEV---VDSNFRCFEKSRVLEMKAMLEETLRAEMLYHCRALEILEPLCVSMRRLDPDEAMASMTQ 222 M+++GR +L F ERN L + V +++ +E ++ + D AAQE+ L + L ++ EC ++L E +M R E V+ I + P + LL+DRE+A++ +E K+ Q L A K++KL S+ + + V +D++ F++ R+ +MK ++ E R++ YH + LE+ C + +L +A+ Q Sbjct: 1 MEQRGRTFAAQLQFMERNGRALEELVAKMMKAREEQEAFLGSFAKSLEDIAAQEECEPLAQCLGSLGECGQKLVSESHDVMMLRPEMEVLQVVTQIQDWAIVPMKRLLEDREKAIK----IEAKL-----QKEYDELRRGSSAKEKEKKLRMLSDQKRRVENVNALLDTHMDNFDRYRIQKMKKIVSELARSQAFYHAKGLELFAVPCQDIAKLQSTDAVKRTPQ 216
BLAST of EWM30475.1 vs. NCBI_GenBank
Match: gi|301120904|ref|XP_002908179.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262103210|gb|EEY61262.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 77.411 bits (189), Expect = 1.578e-13 Identity = 53/211 (25.12%), Postives = 106/211 (50.24%), Query Frame = 0 Query: 1 MDEKGRVLQGRLDFCERNVTTLRQGVRALLRNHDEGCNVTMDLSQKVRDTAAQEQFIDLQEDLIAIAECTKRLAEERRTIMCERAEERVISTFDLILSRVLHPTRLLLKDRERALRKFRAMERKITFSGEQTLLSMLNLEDDADTKQQKLANYSECAKHTDEVVDSNFRCFEKSRVLEMKAMLEETLRAEMLYHCRALEILEPLCVSMRRL 211 M+ +GR L +L F ERN L + V +++ +E ++ + D AAQE+ L + L ++ EC+++L E +M R E ++ I + P + LL+DRE+A + +E K+ E+ L + + + K + L++ ++ + ++D + F++ R+ +MK ++ E R++ YH + LE+ C + +L Sbjct: 1 MEHRGRTLAAQLQFMERNGRALEELVAKMMKAREEQEAFLGSFAKSLEDIAAQEECAPLAQCLGSLGECSQKLVSESHDVMMLRPETEILQVVTQIQDWAIVPMKRLLEDREKATK----IEAKLQKEYEE--LKRGSSTKEKEKKLRMLSDQKRRVENVNSLLDRHMESFDRYRMQKMKKIVSELARSQAFYHAKGLELFTTSCQGVAKL 205
BLAST of EWM30475.1 vs. NCBI_GenBank
Match: gi|970630165|gb|KUF77185.1| (hypothetical protein AM587_10013614 [Phytophthora nicotianae]) HSP 1 Score: 76.6406 bits (187), Expect = 3.143e-13 Identity = 59/225 (26.22%), Postives = 108/225 (48.00%), Query Frame = 0 Query: 1 MDEKGRVLQGRLDFCERNVTTLRQGVRALLRNHDEGCNVTMDLSQKVRDTAAQEQFIDLQEDLIAIAECTKRLAEERRTIMCERAEERVISTFDLILSRVLHPTRLLLKDRERALRKFRAMERKITFSGEQTLLSMLNLEDDADTKQQKLANYSECAKHTDEV---VDSNFRCFEKSRVLEMKAMLEETLRAEMLYHCRALEILEPLCVSMRRLDPDEAMASMTQ 222 M+++GR +L F ERN L + V +++ +E ++ + D AAQE+ L + L ++ EC ++L E +M R E V+ I + P + LL+DRE A++ +E K+ Q L A K++KL S+ + + V +D++ F++ R+ +MK ++ E R++ YH + LE+ C + +L +A+ Q Sbjct: 1 MEQRGRTFAAQLQFMERNGRALEELVAKMMKAREEQEAFLGSFAKSLEDIAAQEECEPLAQCLGSLGECGQKLVSESHDVMMLRPEMEVLQVVTQIQDWAIVPMKRLLEDREXAIK----IEAKL-----QKEYDELRRGSSAKEKEKKLRMLSDQKRRVENVNALLDTHMDNFDRYRIQKMKKIVSELARSQAFYHAKGLELFAVPCQDIAKLQSMDAVKRTPQ 216 The following BLAST results are available for this feature:
BLAST of EWM30475.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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