EWM29027.1, cds1638 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29027.1 vs. NCBI_GenBank
Match: gi|585111545|gb|EWM29027.1| (thiamin pyrophosphokinase 1 [Nannochloropsis gaditana]) HSP 1 Score: 740.339 bits (1910), Expect = 0.000e+0 Identity = 361/361 (100.00%), Postives = 361/361 (100.00%), Query Frame = 0
Query: 1 MSYHGGNRKRKFGVSSRSRSKSDGSVRHKNAFPAALSPLPKYRWDNSVDFGEHDVDSAEPVTAAGRQTNNKGWRGQQGDDPNGSAVINALIILNTDCVGGSLFRRFWAHSTLRVCADGGGNRLYDSLGKMEREDFVPMAINGDLDSLREEVADWYRARGSQVVKNADQDSNDLEKCLEFLKGQEAANKGPGSSGGKDGVGLRPWERKQVATRQSSRLNVFVLGALGQRFDHTMANCHILYRYSKVFRRLVLLGEESLAFLLPAGRHWIVPDARTENPVCGLIPMGQPCTSIRTRGLRWELRGEAMAMGSLVSTSNERVMVDGGGEGEGGEEGREGERGVWIENSDPVIWTSGLKKEWQKGS 361
MSYHGGNRKRKFGVSSRSRSKSDGSVRHKNAFPAALSPLPKYRWDNSVDFGEHDVDSAEPVTAAGRQTNNKGWRGQQGDDPNGSAVINALIILNTDCVGGSLFRRFWAHSTLRVCADGGGNRLYDSLGKMEREDFVPMAINGDLDSLREEVADWYRARGSQVVKNADQDSNDLEKCLEFLKGQEAANKGPGSSGGKDGVGLRPWERKQVATRQSSRLNVFVLGALGQRFDHTMANCHILYRYSKVFRRLVLLGEESLAFLLPAGRHWIVPDARTENPVCGLIPMGQPCTSIRTRGLRWELRGEAMAMGSLVSTSNERVMVDGGGEGEGGEEGREGERGVWIENSDPVIWTSGLKKEWQKGS
Sbjct: 1 MSYHGGNRKRKFGVSSRSRSKSDGSVRHKNAFPAALSPLPKYRWDNSVDFGEHDVDSAEPVTAAGRQTNNKGWRGQQGDDPNGSAVINALIILNTDCVGGSLFRRFWAHSTLRVCADGGGNRLYDSLGKMEREDFVPMAINGDLDSLREEVADWYRARGSQVVKNADQDSNDLEKCLEFLKGQEAANKGPGSSGGKDGVGLRPWERKQVATRQSSRLNVFVLGALGQRFDHTMANCHILYRYSKVFRRLVLLGEESLAFLLPAGRHWIVPDARTENPVCGLIPMGQPCTSIRTRGLRWELRGEAMAMGSLVSTSNERVMVDGGGEGEGGEEGREGERGVWIENSDPVIWTSGLKKEWQKGS 361
BLAST of EWM29027.1 vs. NCBI_GenBank
Match: gi|669162004|ref|XP_008616564.1| (thiamine pyrophosphokinase [Saprolegnia diclina VS20] >gi|530731755|gb|EQC29997.1| thiamine pyrophosphokinase [Saprolegnia diclina VS20]) HSP 1 Score: 177.948 bits (450), Expect = 4.701e-50 Identity = 98/270 (36.30%), Postives = 150/270 (55.56%), Query Frame = 0
Query: 89 ALIILN-TDCVGGSLFRRFWAHSTLRVCADGGGNRLYDSL-GKMEREDFVPMAINGDLDSLREEVADWYRARGSQVVKNADQDSNDLEKCLEFLKGQEAANKGPGSSGGKDGVGLRPWERKQVATRQSSRLNVFVLGALGQRFDHTMANCHILYRYSKVFRRLVLLGEESLAFLLPAGRHWIVPDARTENPVCGLIPMGQPCTSIRTRGLRWELRGEAMAMGSLVSTSNERVMVDGGGEGEGGEEGREGERGVWIENSDPVIWTSGLKKE 356
AL+ILN T V G F W +T+ +CADGG N+LYD+ + E ++P + GDLDSLR +V+ ++ ARG+ ++K+ DQD+NDL+KCL L+ +A+ PG G D L+ L V +LGA+G RFD + N LYR+S VF + L + + LL G+H I P+ E+ CGLIP+G C ++ T+GL+W++ A+ VS+SN + + + +ENSDP+IWT+ ++ +
Sbjct: 29 ALVILNGTGLVKG--FEALWPRATVTICADGGANKLYDTWRAAGKDEPWIPQYVKGDLDSLRPDVSAFFEARGTVIMKDPDQDTNDLDKCLALLESLQASM--PGKEDGNDASALK--------------LKVLMLGAMGGRFDQEIQNISALYRWSHVFESMTLFSDHTSVMLLSPGKHCIRPNFDIESRTCGLIPLGGTCKALTTQGLKWDMTDFETAVSGFVSSSNHCLADE-----------------IIVENSDPLIWTTEIRSD 263
BLAST of EWM29027.1 vs. NCBI_GenBank
Match: gi|698777879|ref|XP_009821983.1| (thiamine pyrophosphokinase, partial [Aphanomyces astaci] >gi|574124108|gb|ETV89583.1| thiamine pyrophosphokinase, partial [Aphanomyces astaci]) HSP 1 Score: 177.178 bits (448), Expect = 9.258e-50 Identity = 100/269 (37.17%), Postives = 149/269 (55.39%), Query Frame = 0
Query: 89 ALIILNTDCVG-GSLFRRFWAHSTLRVCADGGGNRLYDSLGK---MEREDFVPMAINGDLDSLREEVADWYRARGSQVVKNADQDSNDLEKCLEFLKGQEAANKGPGSSGGKDGVGLRPWERKQVATRQSSRLNVFVLGALGQRFDHTMANCHILYRYSKVFRRLVLLGEESLAFLLPAGRHWIVPDARTENPVCGLIPMGQPCTSIRTRGLRWELRGEAMAMGSLVSTSNERVMVDGGGEGEGGEEGREGERGVWIENSDPVIWTSGL 353
ALI++N +G S F W + VCADGG N+LYD + + + ++++P I GDLDS+R EVA ++ +G+QV+K+ DQ+SNDL+KCL L+ + + ++G D V +LNV V+GA+G RFD M N + L+++S +F R+ L+ + + A LL G H I P+ E CGLIP+G C + T+GL+W L + A G LVSTSN + D V ++ SDP+IWT+ L
Sbjct: 36 ALIVING--IGLISCFDHLWEKARFTVCADGGANKLYDYIKRDKVVPPKNYIPQYIKGDLDSIRPEVASYFELQGTQVIKDPDQNSNDLDKCLSLLRTLQ---RDLNANGHGDAV----------------KLNVLVVGAMGGRFDQEMQNVNALFQWSSIFHRMTLVSDSTSATLLVPGTHCIRPNFAVEGRTCGLIPVGGSCEILTTKGLKWNLTNHSTAFGGLVSTSNHVLDCD-----------------VHVDTSDPLIWTTEL 266
BLAST of EWM29027.1 vs. NCBI_GenBank
Match: gi|813178332|ref|XP_012205635.1| (thiamine pyrophosphokinase [Saprolegnia parasitica CBS 223.65] >gi|641529481|gb|KDO23652.1| thiamine pyrophosphokinase [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 175.252 bits (443), Expect = 3.963e-49 Identity = 96/270 (35.56%), Postives = 151/270 (55.93%), Query Frame = 0
Query: 89 ALIILN-TDCVGGSLFRRFWAHSTLRVCADGGGNRLYDSL-GKMEREDFVPMAINGDLDSLREEVADWYRARGSQVVKNADQDSNDLEKCLEFLKGQEAANKGPGSSGGKDGVGLRPWERKQVATRQSSRLNVFVLGALGQRFDHTMANCHILYRYSKVFRRLVLLGEESLAFLLPAGRHWIVPDARTENPVCGLIPMGQPCTSIRTRGLRWELRGEAMAMGSLVSTSNERVMVDGGGEGEGGEEGREGERGVWIENSDPVIWTSGLKKE 356
AL+ILN T V G F W +T+ +CADGG N+LYD+ + E ++P + GDLDSLR +V+ ++ ARG+ ++K+ DQD+NDL+KCL L+ +A+ P + G +++L V +LGA+G RFD + N LYR+S VF + L + + LLP G+H I P+ E+ CGLIP+ C ++ T+GL+W++ A+ VS+SN + +E + +ENSDP+IWT+ ++ +
Sbjct: 29 ALVILNGTGLVKG--FEALWPRATITICADGGANKLYDTWRASGKDEPWIPQYVKGDLDSLRPDVSAFFEARGTVIIKDPDQDTNDLDKCLALLESLQASM--PSNDDGD---------------ASAAKLKVLMLGAMGGRFDQEIQNISALYRWSHVFESMTLFSDHTSVMLLPPGKHCIRPNFDIESRTCGLIPLSGTCKALTTQGLKWDMTDFETAISGFVSSSNHCL----------ADE-------IIVENSDPLIWTTEIRPD 262
BLAST of EWM29027.1 vs. NCBI_GenBank
Match: gi|325190318|emb|CCA24794.1| (thiamin pyrophosphokinase putative [Albugo laibachii Nc14]) HSP 1 Score: 175.252 bits (443), Expect = 6.155e-49 Identity = 94/254 (37.01%), Postives = 138/254 (54.33%), Query Frame = 0
Query: 102 LFRRFWAHSTLRVCADGGGNRLYDSLGKMERED-FVPMAINGDLDSLREEVADWYRARGSQVVKNADQDSNDLEKCLEFLKGQEAANKGPGSSGGKDGVGLRPWERKQVATRQSSRLNVFVLGALGQRFDHTMANCHILYRYSKVFRRLVLLGEESLAFLLPAGRHWIVPDARTENPVCGLIPMGQPCTSIRTRGLRWELRGEAMAMGSLVSTSNERVMVDGGGEGEGGEEGREGERGVWIENSDPVIWTSGLK 354
+F W+++ + +CADGG N LYD ++E E F+P I GDLDSLR +V +Y +G++++++ DQDSNDL+KCL L +E++Q T+ + R VF+ G +G RFD M N + L+RY F+ + L+ E + A LL G H I P+ E VCG+IP+G C + T GL+W+L ++ G LVSTSN ++ V I NSDPVIWT+ L+
Sbjct: 50 IFCHMWSNAQVTICADGGANCLYDRAVRVEAESTFIPKYIKGDLDSLRPDVQSYYEQQGTEIIQDLDQDSNDLDKCLNLL-----------------------YEKQQ--TKSAKRYAVFIFGGMGGRFDQEMQNINCLFRYHSKFQEMCLISEATTARLLLGGSHEIEPNLEFETGVCGIIPLGGMCRKLTTEGLQWDLNEQSSRFGELVSTSN-----------------FIKQKRVLIRNSDPVIWTTELR 261
BLAST of EWM29027.1 vs. NCBI_GenBank
Match: gi|635370764|emb|CCI41027.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 174.096 bits (440), Expect = 1.486e-48 Identity = 96/253 (37.94%), Postives = 134/253 (52.96%), Query Frame = 0
Query: 102 LFRRFWAHSTLRVCADGGGNRLYDSLGKMERED-FVPMAINGDLDSLREEVADWYRARGSQVVKNADQDSNDLEKCLEFLKGQEAANKGPGSSGGKDGVGLRPWERKQVATRQSSRLNVFVLGALGQRFDHTMANCHILYRYSKVFRRLVLLGEESLAFLLPAGRHWIVPDARTENPVCGLIPMGQPCTSIRTRGLRWELRGEAMAMGSLVSTSNERVMVDGGGEGEGGEEGREGERGVWIENSDPVIWTSGL 353
LF W+ + + +CADGG N LYD K+E E F+P I GDLDSLR V +Y RGS+++++ DQDSNDL+KCL L W++++ + S +V + G +G RFD M N + L+RY F+ + L+ E + A LL AG H I P+ E VCG+IP+G PC + T GL+W++ G +VSTSN E+ V I+NSDPVIWT+ L
Sbjct: 53 LFCHLWSSAHVTICADGGANCLYDEATKVEAESIFLPKYIKGDLDSLRPAVRAFYEQRGSEIIQDLDQDSNDLDKCLNLL-----------------------WDKQEEIS--SGMFSVVIFGGMGGRFDQEMQNINCLFRYQSKFQEICLVSESTTARLLVAGSHEIEPNLEYETGVCGIIPLGGPCRKLTTEGLQWDVTDRYSGFGEMVSTSN-----------------LIKEKRVLIQNSDPVIWTTEL 263
BLAST of EWM29027.1 vs. NCBI_GenBank
Match: gi|1173949202|gb|OQR97270.1| (thiamin pyrophosphokinase [Achlya hypogyna]) HSP 1 Score: 172.17 bits (435), Expect = 4.942e-48 Identity = 98/267 (36.70%), Postives = 143/267 (53.56%), Query Frame = 0
Query: 89 ALIILN-TDCVGGSLFRRFWAHSTLRVCADGGGNRLYDSLGKMEREDFVPMAINGDLDSLREEVADWYRARGSQVVKNADQDSNDLEKCLEFLKGQEAANKGPGSSGGKDGVGLRPWERKQVATRQSSRLNVFVLGALGQRFDHTMANCHILYRYSKVFRRLVLLGEESLAFLLPAGRHWIVPDARTENPVCGLIPMGQPCTSIRTRGLRWELRGEAMAMGSLVSTSNERVMVDGGGEGEGGEEGREGERGVWIENSDPVIWTSGLK 354
AL+I+N V G F W +T+ +CADGG N+L+D + + FVP + GDLDSLR EVAD++ ++G+ +VK+ DQ+SNDL+KCL L+ + S D + +L V VLGA+G RFD + N + LYR+S VF + L + + A LL G H I P+ E CGLIP+G C S+ T+GL+W++ +G VSTSN + + +ENSDP++WT+ L+
Sbjct: 28 ALVIVNGVGFVPG--FAALWPRATVTICADGGANKLHD----VWKAKFVPQYVKGDLDSLRPEVADYFESKGTVIVKDPDQESNDLDKCLHLLQTLQ--------SSMADNI----------------KLKVLVLGAMGGRFDQEIQNINALYRWSSVFESMTLFSDHTSATLLLPGTHLIRPNFDVETRTCGLIPLGGVCKSVTTKGLKWDMTDFETTIGGFVSTSNHCL-----------------SDEITVENSDPLVWTTELQ 247
BLAST of EWM29027.1 vs. NCBI_GenBank
Match: gi|635117058|ref|XP_007981521.1| (PREDICTED: thiamin pyrophosphokinase 1 isoform X2 [Chlorocebus sabaeus] >gi|635117060|ref|XP_007981522.1| PREDICTED: thiamin pyrophosphokinase 1 isoform X2 [Chlorocebus sabaeus]) HSP 1 Score: 168.703 bits (426), Expect = 7.290e-47 Identity = 96/267 (35.96%), Postives = 138/267 (51.69%), Query Frame = 0
Query: 89 ALIILNTDCVGGSLFRRFWAHSTLRVCADGGGNRLYDSLGKMEREDFVPMAINGDLDSLREEVADWYRARGSQVVKNADQDSNDLEKCLEFLKGQEAANKGPGSSGGKDGVGLRPWERKQVATRQSSRLNVFVLGALGQRFDHTMANCHILYRYSKVFR-RLVLLGEESLAFLLPAGRHWIVPDARTENPVCGLIPMGQPCTSIRTRGLRWELRGEAMAMGSLVSTSNERVMVDGGGEGEGGEEGREGERGVWIENSDPVIWTSGLK 354
L+ILN + FR W + LR CADGG NRLYD + + ERE F+P INGD DS+R EV ++Y +G +++ DQD D KCL+ L+ K++ + + LG L RFD MA+ + L+R + + ++++ EESL +LL G+H + D E CGLIP+GQPCT + T GL+W L+ + +A G+LVSTSN DG G V +E P++WT +K
Sbjct: 20 CLVILNQPL--DNYFRHLWNKALLRACADGGANRLYD-ITEGERESFLPEFINGDFDSIRPEVREYYATKGCELISTPDQDHTDFTKCLKVLQ-------------------------KKIEEKDLKVDVIVTLGGLAGRFDQIMASVNTLFRATHITPFPIIIIQEESLIYLLQPGKHRLHVDTGMEGKWCGLIPVGQPCTQVTTTGLKWNLKNDVLAFGTLVSTSNTY---DGSGV-------------VTVETDHPLLWTMAIK 242
BLAST of EWM29027.1 vs. NCBI_GenBank
Match: gi|635117054|ref|XP_007981519.1| (PREDICTED: thiamin pyrophosphokinase 1 isoform X1 [Chlorocebus sabaeus] >gi|635117056|ref|XP_007981520.1| PREDICTED: thiamin pyrophosphokinase 1 isoform X1 [Chlorocebus sabaeus]) HSP 1 Score: 169.088 bits (427), Expect = 1.061e-46 Identity = 97/277 (35.02%), Postives = 141/277 (50.90%), Query Frame = 0
Query: 79 DDPNGSAVINALIILNTDCVGGSLFRRFWAHSTLRVCADGGGNRLYDSLGKMEREDFVPMAINGDLDSLREEVADWYRARGSQVVKNADQDSNDLEKCLEFLKGQEAANKGPGSSGGKDGVGLRPWERKQVATRQSSRLNVFVLGALGQRFDHTMANCHILYRYSKVFR-RLVLLGEESLAFLLPAGRHWIVPDARTENPVCGLIPMGQPCTSIRTRGLRWELRGEAMAMGSLVSTSNERVMVDGGGEGEGGEEGREGERGVWIENSDPVIWTSGLK 354
+ P + L+ILN + FR W + LR CADGG NRLYD + + ERE F+P INGD DS+R EV ++Y +G +++ DQD D KCL+ L+ K++ + + LG L RFD MA+ + L+R + + ++++ EESL +LL G+H + D E CGLIP+GQPCT + T GL+W L+ + +A G+LVSTSN DG G V +E P++WT +K
Sbjct: 31 ESPKSGNLKYCLVILNQPL--DNYFRHLWNKALLRACADGGANRLYD-ITEGERESFLPEFINGDFDSIRPEVREYYATKGCELISTPDQDHTDFTKCLKVLQ-------------------------KKIEEKDLKVDVIVTLGGLAGRFDQIMASVNTLFRATHITPFPIIIIQEESLIYLLQPGKHRLHVDTGMEGKWCGLIPVGQPCTQVTTTGLKWNLKNDVLAFGTLVSTSNTY---DGSGV-------------VTVETDHPLLWTMAIK 263
BLAST of EWM29027.1 vs. NCBI_GenBank
Match: gi|544423481|ref|XP_005551131.1| (PREDICTED: thiamin pyrophosphokinase 1 [Macaca fascicularis] >gi|982242006|ref|XP_015303701.1| PREDICTED: thiamin pyrophosphokinase 1 [Macaca fascicularis]) HSP 1 Score: 167.933 bits (424), Expect = 1.770e-46 Identity = 96/267 (35.96%), Postives = 138/267 (51.69%), Query Frame = 0
Query: 89 ALIILNTDCVGGSLFRRFWAHSTLRVCADGGGNRLYDSLGKMEREDFVPMAINGDLDSLREEVADWYRARGSQVVKNADQDSNDLEKCLEFLKGQEAANKGPGSSGGKDGVGLRPWERKQVATRQSSRLNVFVLGALGQRFDHTMANCHILYRYSKVFR-RLVLLGEESLAFLLPAGRHWIVPDARTENPVCGLIPMGQPCTSIRTRGLRWELRGEAMAMGSLVSTSNERVMVDGGGEGEGGEEGREGERGVWIENSDPVIWTSGLK 354
L+ILN + FR W + LR CADGG NRLYD + + ERE F+P INGD DS+R EV ++Y +G +++ DQD D KCL+ L+ K++ + + LG L RFD MA+ + L+R + + ++++ EESL +LL G+H + D E CGLIP+GQPCT + T GL+W L+ + +A G+LVSTSN DG G V +E P++WT +K
Sbjct: 20 CLVILNQPL--DNYFRHLWNKALLRACADGGANRLYD-ITEGERESFLPEFINGDFDSIRPEVREYYATKGCELISTPDQDHTDFTKCLKVLQ-------------------------KKIEEKDLKVDVIVTLGGLAGRFDQIMASVNTLFRATHITPFPVIIIQEESLIYLLQPGKHRLHVDTGKEGNWCGLIPVGQPCTQVTTTGLKWNLKNDVLAFGTLVSTSNTY---DGSGV-------------VTVETDHPLLWTMAIK 242 The following BLAST results are available for this feature:
BLAST of EWM29027.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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