EWM29046.1, cds1627 (CDS) Nannochloropsis gaditana

Overview
NameEWM29046.1
Unique Namecds1627
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:1107121..1107815 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29046.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100024g1.4304.mrna
GbkeyCDS
End range.
End range1107815
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:1107121..1107815 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM29046.1 vs. NCBI_GenBank
Match: gi|585111565|gb|EWM29046.1| (hypothetical protein Naga_100024g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 426.402 bits (1095), Expect = 2.439e-150
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0 
Query:    1 MKLDRKTGGHKDDNGASSGNQTTMEKDARSVANAARRQRTGRVGGNEDEGEEGKEGVEREEGGPPPGEGGASGRGRGTKGKAAASSLAPGGPEVSAMSVSSEAASVPECIELASVGAGQGGGGGSGGGGSDGGGGGGSGDGINEMEPPGSSPARSSAALALASMFRMPQGEERAGEGGKEGGMREAGVENGDRHEDGFAFPLVDGGAKRGSKRGPRGGEEGGGRRRRRGRR 231
            MKLDRKTGGHKDDNGASSGNQTTMEKDARSVANAARRQRTGRVGGNEDEGEEGKEGVEREEGGPPPGEGGASGRGRGTKGKAAASSLAPGGPEVSAMSVSSEAASVPECIELASVGAGQGGGGGSGGGGSDGGGGGGSGDGINEMEPPGSSPARSSAALALASMFRMPQGEERAGEGGKEGGMREAGVENGDRHEDGFAFPLVDGGAKRGSKRGPRGGEEGGGRRRRRGRR
Sbjct:    1 MKLDRKTGGHKDDNGASSGNQTTMEKDARSVANAARRQRTGRVGGNEDEGEEGKEGVEREEGGPPPGEGGASGRGRGTKGKAAASSLAPGGPEVSAMSVSSEAASVPECIELASVGAGQGGGGGSGGGGSDGGGGGGSGDGINEMEPPGSSPARSSAALALASMFRMPQGEERAGEGGKEGGMREAGVENGDRHEDGFAFPLVDGGAKRGSKRGPRGGEEGGGRRRRRGRR 231
The following BLAST results are available for this feature:
BLAST of EWM29046.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585111565|gb|EWM29046.1|2.439e-150100.00hypothetical protein Naga_100024g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1631rna1631Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications