EWM29048.1, cds1625 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29048.1 vs. NCBI_GenBank
Match: gi|585111567|gb|EWM29048.1| (phytanoyl- dioxygenase [Nannochloropsis gaditana]) HSP 1 Score: 640.573 bits (1651), Expect = 0.000e+0 Identity = 307/307 (100.00%), Postives = 307/307 (100.00%), Query Frame = 0
Query: 1 MPSPRWCAEGSEDLRLPGIEEDRDLWEAYRRRFEEDGYLVLEGYWSKATCTALRERMDHLVAGFDLAAHDSVFSTDEQNRTSDTYFLESGDKIHYFWEEGAIDKATGAFRQPRATSINKVGHALHDLDPLFQKVTYTPQIGQLARAVGGLHVPLVAQSMYIFKQPRIGGKVGAHQDGTFLYTEPQSVVGFWWALEDCTQKNGCLWAVPGSHRQGVSRRFRRRNDNKGTEFYPPEAVEWDLSGGIPLEVKAGALVLLHHALVHYSLENASAASRHAYSIHVVEGDGSSLYPQDNWLQRGSTMPFQPLP 307
MPSPRWCAEGSEDLRLPGIEEDRDLWEAYRRRFEEDGYLVLEGYWSKATCTALRERMDHLVAGFDLAAHDSVFSTDEQNRTSDTYFLESGDKIHYFWEEGAIDKATGAFRQPRATSINKVGHALHDLDPLFQKVTYTPQIGQLARAVGGLHVPLVAQSMYIFKQPRIGGKVGAHQDGTFLYTEPQSVVGFWWALEDCTQKNGCLWAVPGSHRQGVSRRFRRRNDNKGTEFYPPEAVEWDLSGGIPLEVKAGALVLLHHALVHYSLENASAASRHAYSIHVVEGDGSSLYPQDNWLQRGSTMPFQPLP
Sbjct: 1 MPSPRWCAEGSEDLRLPGIEEDRDLWEAYRRRFEEDGYLVLEGYWSKATCTALRERMDHLVAGFDLAAHDSVFSTDEQNRTSDTYFLESGDKIHYFWEEGAIDKATGAFRQPRATSINKVGHALHDLDPLFQKVTYTPQIGQLARAVGGLHVPLVAQSMYIFKQPRIGGKVGAHQDGTFLYTEPQSVVGFWWALEDCTQKNGCLWAVPGSHRQGVSRRFRRRNDNKGTEFYPPEAVEWDLSGGIPLEVKAGALVLLHHALVHYSLENASAASRHAYSIHVVEGDGSSLYPQDNWLQRGSTMPFQPLP 307
BLAST of EWM29048.1 vs. NCBI_GenBank
Match: gi|299470319|emb|CBN78369.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 338.576 bits (867), Expect = 2.312e-113 Identity = 173/290 (59.66%), Postives = 202/290 (69.66%), Query Frame = 0
Query: 18 GIEEDRDLWEAYRRRFEEDGYLVLEGYWSKATCTALRERMDHLVAGFDLAAHDSVFSTDEQNRTSDTYFLESGDKIHYFWEEGAIDKATGAFRQPRATSINKVGHALHDLDPLFQKVTYTPQIGQLARAVGGLHVPLVAQSMYIFKQPRIGGKVGAHQDGTFLYTEPQSVVGFWWALEDCTQKNGCLWAVPGSHRQGVSRRFRRRNDNKGTEFYPPEAVEWDLSGGIPLEVKAGALVLLHHALVHYSLENASAASRHAYSIHVVEGDGSSLYPQDNWLQRGSTMPFQPLP 307
G E + L E R F E GYLVL +WSK C +RER+ +V DL ++FSTDE D YFL SGDKI +FWE GA D G F R SINK+GHALHDLDP+ +K +Y ++GQ++R +G L PL QSMYIFKQPRIGG+V HQDG FLYTEPQSVVG+WWALEDCT NGCLWAVPGSHR+ V RRF+R +G EF PPEA +D+ G +PLEVKAG L+LLHH++VHYS N S SRHAYSIHVVEG YP+DNWLQR PFQ LP
Sbjct: 9 GAGEGKFLSEEQREHFNEKGYLVLPDWWSKQECEEIRERVQQVVQDMDLDEARTIFSTDESKHAEDAYFLGSGDKIRFFWEAGAFDD-KGEFVHDRLKSINKIGHALHDLDPVMKKYSYEKRVGQVSRDLG-LSTPLAVQSMYIFKQPRIGGEVTPHQDGAFLYTEPQSVVGYWWALEDCTLSNGCLWAVPGSHRRVVKRRFKRSPTGEGCEFEPPEAEAFDVEGAVPLEVKAGTLILLHHSVVHYSEANTSEKSRHAYSIHVVEGKEGFRYPEDNWLQRPGETPFQELP 296
BLAST of EWM29048.1 vs. NCBI_GenBank
Match: gi|763338699|ref|WP_044197022.1| (phytanoyl-CoA dioxygenase family protein [Hyalangium minutum] >gi|670616162|gb|KFE62735.1| Phytanoyl-CoA dioxygenase domain containing 1 [Hyalangium minutum]) HSP 1 Score: 290.812 bits (743), Expect = 6.978e-95 Identity = 149/272 (54.78%), Postives = 184/272 (67.65%), Query Frame = 0
Query: 33 FEEDGYLVLEGYWSKATCTALRERMDHLVAGFDLAAHDSVFSTDEQNRTSDTYFLESGDKIHYFWEEGAIDKATGAFRQPRATSINKVGHALHDLDPLFQKVTYTPQIGQLARAVGGLHVPLVAQSMYIFKQPRIGGKVGAHQDGTFLYTEPQSVVGFWWALEDCTQKNGCLWAVPGSHRQGVSRRFRRRNDNKGTEFYPPEAVEWDLSGGIPLEVKAGALVLLHHALVHYSLENASAASRHAYSIHVVEGDGSSLYPQDNWLQRGSTMPFQ 304
FE GYLVL G+ S+A C AL+ R + LVA F S+F+T EQ RTSD YFL SGDK+H+F+EE A K G RQ +A SINK+GHALHDLDPLF++ + P + LA +G L PL+ QSMYIFKQP IGG+V +HQD TFLYTEP + +GFW+ALED T +NGCLWA+PG H+QG+ +RF R GT F + G +PLEVK G LV+LH L H S N S SRHAYS+H + D ++ YP+DNWLQR MP Q
Sbjct: 7 FERQGYLVLPGFASEAACDALKARAEALVAAFQ-PETVSIFTTHEQTRTSDAYFLSSGDKVHFFFEENAF-KPDGTLRQGKALSINKIGHALHDLDPLFRQFSRAPGMAALATELG-LKQPLLLQSMYIFKQPHIGGEVNSHQDSTFLYTEPLTCLGFWFALEDATVENGCLWALPGGHKQGLRKRF-VRAPGGGTAFQVLDPTPMPEEGFVPLEVKKGTLVMLHGQLPHKSGANTSPKSRHAYSVHCI--DATATYPRDNWLQRAPDMPAQ 272
BLAST of EWM29048.1 vs. NCBI_GenBank
Match: gi|836730136|ref|WP_047862199.1| (phytanoyl-CoA dioxygenase family protein [Archangium gephyra]) HSP 1 Score: 288.886 bits (738), Expect = 5.437e-94 Identity = 148/279 (53.05%), Postives = 191/279 (68.46%), Query Frame = 0
Query: 31 RRFEEDGYLVLEGYWSKATCTALRERMDHLVAGFDLAAHDSVFSTDEQNRTSDTYFLESGDKIHYFWEEGAIDKATGAFRQPRATSINKVGHALHDLDPLFQKVTYTPQIGQLARAVGGLHVPLVAQSMYIFKQPRIGGKVGAHQDGTFLYTEPQSVVGFWWALEDCTQKNGCLWAVPGSHRQGVSRRFRRRNDNKGTEFYPPEAVEWDLSGGIPLEVKAGALVLLHHALVHYSLENASAASRHAYSIHVVEGDGSSLYPQDNWLQRGSTMP---FQPL 306
R FE G+LVL G+ A C AL+ R + LVAGF S+F+T++Q RTSD YFL SGD I +F+EE A + G+ RQ +A SINK+GHALHDLDPLF++ + TP++ LA +G L PL+ QSMYIFKQP IGG+V HQD TFLYTEP + +GFW+ALED T +NGCLWA+PG HR G+ +RF R GT F ++ G +PLEV+ G LV+LH L H S N S+ SRHAYS+H++ DG++ YP+DNWLQR ++P F PL
Sbjct: 5 RDFERQGFLVLPGFAPAAACDALKARAEQLVAGFQ-PETVSIFTTNDQTRTSDEYFLASGDDIRFFFEENAF-RPDGSLRQDKALSINKIGHALHDLDPLFERFSRTPELAGLASELG-LTKPLLLQSMYIFKQPHIGGEVNCHQDATFLYTEPSTCLGFWFALEDATLENGCLWALPGGHRLGLKKRFVRAAGG-GTAFQVLDSTPLPEEGMVPLEVEKGTLVVLHGLLPHKSGANTSSRSRHAYSVHLI--DGTARYPRDNWLQRAPSLPPRGFGPL 277
BLAST of EWM29048.1 vs. NCBI_GenBank
Match: gi|827423060|gb|AKJ02956.1| (Phytanoyl-CoA dioxygenase domain containing 1 [Archangium gephyra]) HSP 1 Score: 288.886 bits (738), Expect = 6.414e-94 Identity = 148/279 (53.05%), Postives = 191/279 (68.46%), Query Frame = 0
Query: 31 RRFEEDGYLVLEGYWSKATCTALRERMDHLVAGFDLAAHDSVFSTDEQNRTSDTYFLESGDKIHYFWEEGAIDKATGAFRQPRATSINKVGHALHDLDPLFQKVTYTPQIGQLARAVGGLHVPLVAQSMYIFKQPRIGGKVGAHQDGTFLYTEPQSVVGFWWALEDCTQKNGCLWAVPGSHRQGVSRRFRRRNDNKGTEFYPPEAVEWDLSGGIPLEVKAGALVLLHHALVHYSLENASAASRHAYSIHVVEGDGSSLYPQDNWLQRGSTMP---FQPL 306
R FE G+LVL G+ A C AL+ R + LVAGF S+F+T++Q RTSD YFL SGD I +F+EE A + G+ RQ +A SINK+GHALHDLDPLF++ + TP++ LA +G L PL+ QSMYIFKQP IGG+V HQD TFLYTEP + +GFW+ALED T +NGCLWA+PG HR G+ +RF R GT F ++ G +PLEV+ G LV+LH L H S N S+ SRHAYS+H++ DG++ YP+DNWLQR ++P F PL
Sbjct: 9 RDFERQGFLVLPGFAPAAACDALKARAEQLVAGFQ-PETVSIFTTNDQTRTSDEYFLASGDDIRFFFEENAF-RPDGSLRQDKALSINKIGHALHDLDPLFERFSRTPELAGLASELG-LTKPLLLQSMYIFKQPHIGGEVNCHQDATFLYTEPSTCLGFWFALEDATLENGCLWALPGGHRLGLKKRFVRAA-GGGTAFQVLDSTPLPEEGMVPLEVEKGTLVVLHGLLPHKSGANTSSRSRHAYSVHLI--DGTARYPRDNWLQRAPSLPPRGFGPL 281
BLAST of EWM29048.1 vs. NCBI_GenBank
Match: gi|1124752864|ref|WP_075011003.1| (phytanoyl-CoA dioxygenase family protein [Stigmatella aurantiaca] >gi|1095357876|emb|SEN11998.1| phytanoyl-CoA hydroxylase [Stigmatella aurantiaca]) HSP 1 Score: 283.493 bits (724), Expect = 5.756e-92 Identity = 145/270 (53.70%), Postives = 184/270 (68.15%), Query Frame = 0
Query: 33 FEEDGYLVLEGYWSKATCTALRERMDHLVAGFDLAAHDSVFSTDEQNRTSDTYFLESGDKIHYFWEEGAIDKATGAFRQPRATSINKVGHALHDLDPLFQKVTYTPQIGQLARAVGGLHVPLVAQSMYIFKQPRIGGKVGAHQDGTFLYTEPQSVVGFWWALEDCTQKNGCLWAVPGSHRQGVSRRFRRRNDNKGTEFYPPEAVEWDLSGGIPLEVKAGALVLLHHALVHYSLENASAASRHAYSIHVVEGDGSSLYPQDNWLQRGSTMP 302
FE G+LVL + + C AL++R + LV GF S+FSTDEQ RTSD YFL SGD+I +F+EE A G+ RQ +A SINK+GHALHDLDPLF + + TP + LA +G L PL+ QSMYIFKQP IGG+V +HQD FLYTEP + +GFW+ALED T +NGCLWA PG HRQG+ RRF R + GT F +A G +PLEV+ G LV+LH L H S N S+ SRHAYS+H++ DG++ YP+DNWL+R +P
Sbjct: 7 FEHQGFLVLPRFVTAGACDALKQRAETLVDGFQPETR-SIFSTDEQRRTSDAYFLSSGDQIRFFFEEDAF-LPDGSLRQAQAQSINKIGHALHDLDPLFDRFSRTPALAGLAAELG-LQRPLLLQSMYIFKQPHIGGEVTSHQDAAFLYTEPSTCLGFWFALEDATLENGCLWAQPGGHRQGLKRRFVRAPEG-GTVFRTLDATPLSEEGMVPLEVEKGTLVVLHGLLPHRSGANTSSRSRHAYSLHLI--DGTATYPEDNWLRRSPALP 270
BLAST of EWM29048.1 vs. NCBI_GenBank
Match: gi|1121245908|ref|WP_073563755.1| (phytanoyl-CoA dioxygenase family protein [Archangium sp. Cb G35] >gi|1113027630|gb|OJT21697.1| phytanoyl-CoA dioxygenase [Archangium sp. Cb G35]) HSP 1 Score: 283.108 bits (723), Expect = 8.001e-92 Identity = 144/272 (52.94%), Postives = 183/272 (67.28%), Query Frame = 0
Query: 31 RRFEEDGYLVLEGYWSKATCTALRERMDHLVAGFDLAAHDSVFSTDEQNRTSDTYFLESGDKIHYFWEEGAIDKATGAFRQPRATSINKVGHALHDLDPLFQKVTYTPQIGQLARAVGGLHVPLVAQSMYIFKQPRIGGKVGAHQDGTFLYTEPQSVVGFWWALEDCTQKNGCLWAVPGSHRQGVSRRFRRRNDNKGTEFYPPEAVEWDLSGGIPLEVKAGALVLLHHALVHYSLENASAASRHAYSIHVVEGDGSSLYPQDNWLQRGSTMP 302
R F GYLVL G+ A C AL+ R + LVAGF S+F+T++Q RTSD YFL SGD I +F+EE A + G+ RQ + SINK+GHALHDLDPLF++ + TP++ LA +G L PL+ QSMYIFKQP IGG+V HQD TFLYTEP + +GFW+ALED T +NGCLWA+PG H G+ +RF R GT F + G +PLEV+ G LV+LH L H S N S+ SRHAYS+H++ DG++ YP+DNWL R TMP
Sbjct: 5 RDFVRQGYLVLPGFVPAAACDALKARAEQLVAGFQ-PETVSIFTTNDQTRTSDEYFLSSGDSIRFFFEENAF-RPDGSLRQDKTLSINKIGHALHDLDPLFERFSRTPELAGLASELG-LTQPLLLQSMYIFKQPHIGGEVNCHQDSTFLYTEPSTCLGFWFALEDATLENGCLWALPGGHTLGLKKRF-VRAPGGGTAFQVLDPTPLPEEGMVPLEVEKGTLVVLHGLLPHKSGANTSSKSRHAYSVHLI--DGTARYPEDNWLHRAPTMP 270
BLAST of EWM29048.1 vs. NCBI_GenBank
Match: gi|759692154|ref|WP_043408810.1| (phytanoyl-CoA dioxygenase family protein [Archangium violaceum] >gi|667798689|gb|KFA88417.1| phytanoyl-CoA dioxygenase [Archangium violaceum Cb vi76]) HSP 1 Score: 282.722 bits (722), Expect = 1.321e-91 Identity = 144/272 (52.94%), Postives = 183/272 (67.28%), Query Frame = 0
Query: 31 RRFEEDGYLVLEGYWSKATCTALRERMDHLVAGFDLAAHDSVFSTDEQNRTSDTYFLESGDKIHYFWEEGAIDKATGAFRQPRATSINKVGHALHDLDPLFQKVTYTPQIGQLARAVGGLHVPLVAQSMYIFKQPRIGGKVGAHQDGTFLYTEPQSVVGFWWALEDCTQKNGCLWAVPGSHRQGVSRRFRRRNDNKGTEFYPPEAVEWDLSGGIPLEVKAGALVLLHHALVHYSLENASAASRHAYSIHVVEGDGSSLYPQDNWLQRGSTMP 302
R F GYLVL G+ A C AL+ R + LVAGF S+F+T++Q RTSD YFL SGD I +F+EE A + G+ RQ + SINK+GHALHDLDPLF++ + TP++ LA +G L PL+ QSMYIFKQP IGG+V HQD TFLYTEP + +GFW+ALED T +NGCLWA+PG H G+ +RF R GT F + G +PLEV+ G LV+LH L H S N S+ SRHAYS+H++ DG++ YP+DNWL R TMP
Sbjct: 5 RDFARQGYLVLPGFVPAAACDALKARAEQLVAGFQ-PETVSIFTTNDQTRTSDEYFLSSGDSIRFFFEENAF-RPDGSLRQDKTLSINKIGHALHDLDPLFERFSRTPELAGLASELG-LKQPLLLQSMYIFKQPHIGGEVNCHQDSTFLYTEPSTCLGFWFALEDATLENGCLWALPGGHTLGLKKRFVRV-PGGGTAFQVLDPTPLPEEGMVPLEVEKGTLVVLHGLLPHKSGANTSSKSRHAYSVHLI--DGTARYPEDNWLHRVPTMP 270
BLAST of EWM29048.1 vs. NCBI_GenBank
Match: gi|760446731|ref|XP_011400434.1| (Phytanoyl-CoA dioxygenase domain-containing protein 1 [Auxenochlorella protothecoides] >gi|675350029|gb|KFM22469.1| Phytanoyl-CoA dioxygenase domain-containing protein 1 [Auxenochlorella protothecoides]) HSP 1 Score: 281.182 bits (718), Expect = 8.343e-91 Identity = 146/274 (53.28%), Postives = 185/274 (67.52%), Query Frame = 0
Query: 33 FEEDGYLVLEGYWSKATCTALRERMDHLVAGFDLAAHDSVFSTDEQNRTSDTYFLESGDKIHYFWEEGAIDKATGAFRQPRATSINKVGHALHDLDPLFQKVTYTPQIGQLARAVGGLHVPLVAQSMYIFKQPRIGGKVGAHQDGTFLYTEPQSVVGFWWALEDCTQKNGCLWAVPGSHRQGVSRRFRRRNDNKGTEFYPPEAVEWDLSGGIPLEVKAGALVLLHHALVHYSLENASAASRHAYSIHVVEGDGSSLYPQDNWLQRGSTMPFQPL 306
FE DGYLV+ + S+ A+R R LVAGF SVF + +Q D YFL+S I +F+E GA D + GA +P+ +INK+GHALHDLDP+FQ +Y+P++ LA+++G L PL QSMYIFKQP IGG+V HQD TFL+T+P SVVG W ALED T +NGCLWA+PGSH+ GV+RRF R D + F P AV + + + L + AGALVLLH ALVH S EN S ASRHA+S+HV+EG + YP NWLQR + MP PL
Sbjct: 11 FERDGYLVIPDFTSREEVAAMRSRALELVAGFQPPKAVSVFDSKDQTSKVDQYFLDSAGAISFFFEAGAFD-SQGAQVKPKELAINKIGHALHDLDPIFQAWSYSPRVCALAQSLG-LRRPLPMQSMYIFKQPGIGGEVVPHQDSTFLFTDPPSVVGLWLALEDATLQNGCLWAIPGSHKAGVARRFLRAPDGR-LAFDAPPAVHAE-ADFVALPMPAGALVLLHGALVHRSDENRSPASRHAFSVHVLEGAAGTRYPATNWLQRPAGMPVAPL 280
BLAST of EWM29048.1 vs. NCBI_GenBank
Match: gi|953494410|emb|CEG44004.1| (phytanoyl-dioxygenase domain-containing protein 1 isoform x1 [Plasmopara halstedii]) HSP 1 Score: 280.026 bits (715), Expect = 2.426e-90 Identity = 144/300 (48.00%), Postives = 189/300 (63.00%), Query Frame = 0
Query: 16 LPGIEEDRDLWEAYRRRFEEDGYLVLEGYWSKATCTALRERMDHLVAGFDLAAHDSVFSTDEQNR-TSDTYFLESGDKIHYFWEEGAIDKATGAFRQPRATSINKVGHALHDLDPLFQKVTYTPQIGQLARAVGGLHVPLVAQSMYIFKQPRIGGKVGAHQDGTFLYTEPQSVVGFWWALEDCTQKNGCLWAVPGSHRQ-GVSRRFRRRNDNKGTEF-------YPPEAVEWDLSGGIPLEVKAGALVLLHHALVHYSLENASAASRHAYSIHVVEGDGSSLYPQDNWLQRGSTMPFQPL 306
+PG+ D+ EA+ R DG+LV++G S TC LR + + V DL H S+F+T+EQ R +D YFL+SGDKI YF+EE A DK P ++NK+GH LH+LDP F+K++Y + + +++ + PL+ QSMYIFKQP IGG+V HQDG++LYTEPQSVVGFWWALEDCT +NGCL VPGSH V +R RR + ++ P + +D+S P+ K G LVLLH VHYS N S SRHAYSIH+VE YP+DNWLQ +PF+PL
Sbjct: 1 MPGLTPDQ--LEAFNR----DGFLVIKGALSSFTCDELRAKANEYVGQCDLKKHCSIFTTNEQTRRMNDEYFLDSGDKIRYFFEERAFDKDQKTLAVPLNVAVNKIGHNLHNLDPAFKKISYDSNVQDIVKSLNYVR-PLIVQSMYIFKQPSIGGEVRPHQDGSYLYTEPQSVVGFWWALEDCTLENGCLHGVPGSHLTVPVLQRLRRTTKEQQEKYGQILLENVPAQVEPFDISKSKPILTKKGDLVLLHSNFVHYSEANKSPYSRHAYSIHIVESHNVK-YPEDNWLQTSDGVPFKPL 292 The following BLAST results are available for this feature:
BLAST of EWM29048.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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