EWM29063.1, cds1624 (CDS) Nannochloropsis gaditana

Overview
NameEWM29063.1
Unique Namecds1624
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:1099188..1099327 +
Alignment locationCM002457.1:1099425..1099533 +
Alignment locationCM002457.1:1099646..1099833 +
Alignment locationCM002457.1:1100008..1100584 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29063.1
Productcarbonic anhydrase
Orig transcript idgnl|cribi|Naga_100024g5.4321.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:1099188..1099327 +
CM002457.1supercontigCM002457.1:1099425..1099533 +
CM002457.1supercontigCM002457.1:1099646..1099833 +
CM002457.1supercontigCM002457.1:1100008..1100584 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0003824catalytic activity
GO:0004089carbonate dehydratase activity
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0008150biological_process
GO:0015976carbon utilization
Vocabulary: INTERPRO
TermDefinition
IPR015892Carbonic_anhydrase_CS
IPR001765Carbonic_anhydrase
Homology
BLAST of EWM29063.1 vs. NCBI_GenBank
Match: gi|585111582|gb|EWM29063.1| (carbonic anhydrase [Nannochloropsis gaditana])

HSP 1 Score: 693.345 bits (1788), Expect = 0.000e+0
Identity = 337/337 (100.00%), Postives = 337/337 (100.00%), Query Frame = 0
Query:    1 MTGSVGTSVKPSISQQNHEVLERIRHHLDDQEHKIHEQLNRFQLIKKAVERICKNDDAYMQSPDIVKAQTTLEDSPLERKGNTAAEALELLKAGNAAFLRDEVPAKQCSDRHIGLHFAQKPHAIIIACSDSRVPPEMIFNCAFGELFVIRLAGNTIDALARASLLYAVQHLHSPLVVVLGHEKCGAVTAALQPPEALAEAPRDIKTLVKKIQSGIECALLEPGLEDVDDERLLCAIVCNVHSVARTLSEHPDIRPFIEQKALSVVGAYYAFNGVVSFFDDGEDGNATGKEVGSTVNGQASLCMSCSGTIHRSSSPTADPSQKVNSRLSVSEGLSKNT 337
            MTGSVGTSVKPSISQQNHEVLERIRHHLDDQEHKIHEQLNRFQLIKKAVERICKNDDAYMQSPDIVKAQTTLEDSPLERKGNTAAEALELLKAGNAAFLRDEVPAKQCSDRHIGLHFAQKPHAIIIACSDSRVPPEMIFNCAFGELFVIRLAGNTIDALARASLLYAVQHLHSPLVVVLGHEKCGAVTAALQPPEALAEAPRDIKTLVKKIQSGIECALLEPGLEDVDDERLLCAIVCNVHSVARTLSEHPDIRPFIEQKALSVVGAYYAFNGVVSFFDDGEDGNATGKEVGSTVNGQASLCMSCSGTIHRSSSPTADPSQKVNSRLSVSEGLSKNT
Sbjct:    1 MTGSVGTSVKPSISQQNHEVLERIRHHLDDQEHKIHEQLNRFQLIKKAVERICKNDDAYMQSPDIVKAQTTLEDSPLERKGNTAAEALELLKAGNAAFLRDEVPAKQCSDRHIGLHFAQKPHAIIIACSDSRVPPEMIFNCAFGELFVIRLAGNTIDALARASLLYAVQHLHSPLVVVLGHEKCGAVTAALQPPEALAEAPRDIKTLVKKIQSGIECALLEPGLEDVDDERLLCAIVCNVHSVARTLSEHPDIRPFIEQKALSVVGAYYAFNGVVSFFDDGEDGNATGKEVGSTVNGQASLCMSCSGTIHRSSSPTADPSQKVNSRLSVSEGLSKNT 337          
BLAST of EWM29063.1 vs. NCBI_GenBank
Match: gi|1053040427|emb|SCK04018.1| (Carbonic anhydrase [uncultured Clostridium sp.])

HSP 1 Score: 162.155 bits (409), Expect = 1.152e-44
Identity = 86/228 (37.72%), Postives = 133/228 (58.33%), Query Frame = 0
Query:   53 CKNDDAYMQSPDIV--KAQTTLEDSPLERKGNTAAEALELLKAGNAAFLRDEVPAKQC-SDRHIGLHFAQKPHAIIIACSDSRVPPEMIFNCAFGELFVIRLAGNTIDALARASLLYAVQHLHSPLVVVLGHEKCGAVTAALQPPEALAEAPRDIKTLVKKIQSGIECALLEPGLEDVDDERLLCAIVCNVHSVARTLSEHPDIRPFIEQKALSVVGAYYAFNGVVSF 277
            C N+ +   + D +   ++TT++++ ++    +A EAL++L+ GN  FL D+   +   S+R   L   Q P+A+I++CSDSRV P  IFN   GE+F IR+AGN +D  A  S+ Y  +HLHSPL+VV+GH+ CGAVTA         E    I+ +V+KI+  +  +        +DD     AI  N+++V + +SE   I+  I Q  + V+GAYY FNG V+F
Sbjct:   19 CTNNASTTDTKDQILNNSETTVQNTTVDTNITSADEALKMLEEGNERFLNDKSELRNVNSERRSELKVGQSPYAVIVSCSDSRVTPTTIFNAGLGEIFDIRIAGNVVDDDALGSIEYGAEHLHSPLIVVIGHQSCGAVTATYNKVVKGEEVKGHIEDIVEKIEPSVNSS------GTIDD-----AIHNNINAVVKEISEDEIIKNLIAQGKVKVIGAYYDFNGKVTF 235          
BLAST of EWM29063.1 vs. NCBI_GenBank
Match: gi|692298047|ref|WP_032119031.1| (carbonic anhydrase [Clostridium sp. CL-2])

HSP 1 Score: 158.688 bits (400), Expect = 2.505e-43
Identity = 86/228 (37.72%), Postives = 132/228 (57.89%), Query Frame = 0
Query:   53 CKNDDAYMQSPDIV--KAQTTLEDSPLERKGNTAAEALELLKAGNAAFLRDEVPAKQC-SDRHIGLHFAQKPHAIIIACSDSRVPPEMIFNCAFGELFVIRLAGNTIDALARASLLYAVQHLHSPLVVVLGHEKCGAVTAALQPPEALAEAPRDIKTLVKKIQSGIECALLEPGLEDVDDERLLCAIVCNVHSVARTLSEHPDIRPFIEQKALSVVGAYYAFNGVVSF 277
            C N+ A  ++ + +    Q T++++ ++    +A EAL++L+ GN  FL D+   +   S+R   L   Q P+A+I++CSDSRV P  IFN   GE+F IR+AGN +D  A  S+ Y  +HLHSPL+VV+GH+ CGAVTA         E    I+ +V+KI+  +  +        +DD     AI  N+++V + +SE   I+  I Q  + V+GAYY FNG V+F
Sbjct:   19 CSNNGATTKTNEQISNNNQATVQNTTVDTSVTSADEALKMLEDGNERFLNDKSELRNVNSERRDELKEGQSPYAVIVSCSDSRVTPTTIFNAGLGEIFDIRIAGNVVDDDALGSIEYGAEHLHSPLIVVIGHQSCGAVTATYNKVVKGEEVKGHIEDIVEKIEPSVNSS------GTIDD-----AIHNNINAVVKEISEDEIIKNLIAQGKVKVIGAYYDFNGKVTF 235          
BLAST of EWM29063.1 vs. NCBI_GenBank
Match: gi|942018587|ref|WP_055268145.1| (carbonic anhydrase [Clostridium disporicum] >gi|933058581|emb|CUP15637.1| carbonic anhydrase [Clostridium disporicum])

HSP 1 Score: 154.451 bits (389), Expect = 1.489e-41
Identity = 87/218 (39.91%), Postives = 123/218 (56.42%), Query Frame = 0
Query:   61 QSPDIVKAQTTLEDSPLERKGNTAAEALELLKAGNAAFLRDEVPAKQC-SDRHIGLHFAQKPHAIIIACSDSRVPPEMIFNCAFGELFVIRLAGNTIDALARASLLYAVQHLHSPLVVVLGHEKCGAVTAALQPPEALAEAPRDIKTLVKKIQSGIECALLEPGLEDVDDERLLCAIVCNVHSVARTLSEHPDIRPFIEQKALSVVGAYYAFNGVVSF 277
            QS +     +  E+  ++ K  TA EA++LL+ GNA FL D+   +   S R   L   Q P+A+I++CSDSRV P  IFN   GE+F IR+AGN +D  A  S+ Y  +HLHSPL+VV+GH+ CGAVTA         +A   I+ +V+KI+  +           +DD     AI  N+ SV + +SE   I+  I +  + VVGAYY  NG V+F
Sbjct:   38 QSENKTNDSSIGENVNVDTKVTTAEEAMKLLEDGNARFLSDKSELRNIDSARRNELKDGQNPYAVIVSCSDSRVTPTTIFNAGLGEIFDIRIAGNIVDDDALGSIEYGAEHLHSPLIVVIGHQSCGAVTATYNSVVKGEKATGHIEDIVEKIEPNVNSN------GTIDD-----AIRANIDSVVKEISEDEIIKNLISEGKVKVVGAYYDLNGKVTF 244          
BLAST of EWM29063.1 vs. NCBI_GenBank
Match: gi|755041541|ref|WP_042394057.1| (carbonic anhydrase [Clostridium saudiense])

HSP 1 Score: 149.828 bits (377), Expect = 4.996e-40
Identity = 84/196 (42.86%), Postives = 116/196 (59.18%), Query Frame = 0
Query:   83 TAAEALELLKAGNAAFLRDEVPAKQCS-DRHIGLHFAQKPHAIIIACSDSRVPPEMIFNCAFGELFVIRLAGNTIDALARASLLYAVQHLHSPLVVVLGHEKCGAVTAALQPPEALAEAPRDIKTLVKKIQSGIECALLEPGLEDVDDERLLCAIVCNVHSVARTLSEHPDIRPFIEQKALSVVGAYYAFNGVVSF 277
            +A EAL++LK GN  F  D    +  S +R   L   Q P+A+I++CSDSRV P  IFN   GE+F +RLAGN +D  A  S+ YAV+HL++PLVVV+GHE CGAVTA         +   ++++ V+KI   I     + G   VDD     AI  N+  V + +SE   I+  I+Q  + VVGAYY  +GVV+F
Sbjct:   48 SADEALQMLKDGNIRFSSDTSILRNISSERRNELKDGQNPYAVIVSCSDSRVTPTTIFNAGLGEIFDVRLAGNVVDDEALGSIEYAVEHLNTPLVVVMGHESCGAVTATYNEVIKGEKVTGNMESFVEKITPSIN----KEGT--VDD-----AIHTNIDRVVQEISEDEAIKTLIQQGKIKVVGAYYNLDGVVNF 232          
BLAST of EWM29063.1 vs. NCBI_GenBank
Match: gi|1052927225|emb|SCJ94464.1| (Carbonic anhydrase [uncultured Clostridium sp.])

HSP 1 Score: 149.828 bits (377), Expect = 6.805e-40
Identity = 84/196 (42.86%), Postives = 115/196 (58.67%), Query Frame = 0
Query:   83 TAAEALELLKAGNAAFLRDEVPAKQCS-DRHIGLHFAQKPHAIIIACSDSRVPPEMIFNCAFGELFVIRLAGNTIDALARASLLYAVQHLHSPLVVVLGHEKCGAVTAALQPPEALAEAPRDIKTLVKKIQSGIECALLEPGLEDVDDERLLCAIVCNVHSVARTLSEHPDIRPFIEQKALSVVGAYYAFNGVVSF 277
            +A EAL++LK GN  F  D    +  S +R   L   Q P+A+I++CSDSRV P  IFN   GE+F +RLAGN +D  A  S+ YAV+HL +PLVVV+GHE CGAVTA         +   ++++ V+KI   I     + G   VDD     AI  N+  V + +SE   I+  I+Q  + VVGAYY  +GVV+F
Sbjct:   48 SADEALQMLKDGNIRFSSDTSILRNISSERRNELKDGQNPYAVIVSCSDSRVTPTTIFNAGLGEIFDVRLAGNVVDDEALGSIKYAVEHLSTPLVVVMGHESCGAVTATYNEVIKGEKVTGNMESFVEKITPSIN----KEGT--VDD-----AIHTNIDRVVQEISEDEAIKTLIQQGKIKVVGAYYNLDGVVNF 232          
BLAST of EWM29063.1 vs. NCBI_GenBank
Match: gi|942084548|ref|WP_055291522.1| (carbonic anhydrase [Clostridium disporicum] >gi|933111666|emb|CUO26609.1| carbonic anhydrase [Clostridium disporicum])

HSP 1 Score: 149.443 bits (376), Expect = 8.787e-40
Identity = 84/196 (42.86%), Postives = 115/196 (58.67%), Query Frame = 0
Query:   83 TAAEALELLKAGNAAFLRDEVPAKQCS-DRHIGLHFAQKPHAIIIACSDSRVPPEMIFNCAFGELFVIRLAGNTIDALARASLLYAVQHLHSPLVVVLGHEKCGAVTAALQPPEALAEAPRDIKTLVKKIQSGIECALLEPGLEDVDDERLLCAIVCNVHSVARTLSEHPDIRPFIEQKALSVVGAYYAFNGVVSF 277
            +A EAL++LK GN  F  D    +  S +R   L   Q P+A+I++CSDSRV P  IFN   GE+F +RLAGN +D  A  S+ YAV+HL +PLVVV+GHE CGAVTA         +   ++++ V+KI   I     + G   VDD     AI  N+  V + +SE   I+  I+Q  + VVGAYY  +GVV+F
Sbjct:   48 SADEALQMLKDGNIRFSSDTSILRNISSERRNELKDGQNPYAVIVSCSDSRVTPTTIFNAGLGEIFDVRLAGNVVDDEALGSIKYAVEHLSTPLVVVMGHESCGAVTATYNEVIKGEKVTGNMESFVEKITPSIN----KEGT--VDD-----AIHTNIDRVVQEISEDEAIKTLIQQGKIKVVGAYYNLDGVVNF 232          
BLAST of EWM29063.1 vs. NCBI_GenBank
Match: gi|1052921441|emb|SCJ12850.1| (Carbonic anhydrase [uncultured Clostridium sp.])

HSP 1 Score: 148.673 bits (374), Expect = 1.629e-39
Identity = 83/196 (42.35%), Postives = 115/196 (58.67%), Query Frame = 0
Query:   83 TAAEALELLKAGNAAFLRDEVPAKQCS-DRHIGLHFAQKPHAIIIACSDSRVPPEMIFNCAFGELFVIRLAGNTIDALARASLLYAVQHLHSPLVVVLGHEKCGAVTAALQPPEALAEAPRDIKTLVKKIQSGIECALLEPGLEDVDDERLLCAIVCNVHSVARTLSEHPDIRPFIEQKALSVVGAYYAFNGVVSF 277
            +A E L++LK GN  F  D    +  S +R   L   Q P+A+I++CSDSRV P  IFN   GE+F +RLAGN +D  A  S+ YAV+HL++PLVVV+GHE CGAVTA         +   ++++ V+KI   I     + G   VDD     AI  N+  V + +SE   I+  I+Q  + VVGAYY  +GVV+F
Sbjct:   48 SADEVLQMLKDGNIRFSSDTSILRNISSERRNELKDGQNPYAVIVSCSDSRVTPTTIFNAGLGEIFDVRLAGNVVDDEALGSIEYAVEHLNTPLVVVMGHESCGAVTATYNEVIKGEKVTGNMESFVEKITPSIN----KEGT--VDD-----AIHTNIDRVVQEISEDEAIKTLIQQGKIKVVGAYYNLDGVVNF 232          
BLAST of EWM29063.1 vs. NCBI_GenBank
Match: gi|505049233|ref|WP_015236335.1| (carbonic anhydrase [Deinococcus peraridilitoris] >gi|429131018|gb|AFZ68033.1| carbonic anhydrase [Deinococcus peraridilitoris DSM 19664])

HSP 1 Score: 148.288 bits (373), Expect = 2.385e-39
Identity = 88/230 (38.26%), Postives = 132/230 (57.39%), Query Frame = 0
Query:   62 SPDIVKAQTTLEDSPLERKGN----TAAEALELLKAGNAAFLRDEVPAKQCS-DRHIGLHFAQKPHAIIIACSDSRVPPEMIFNCAFGELFVIRLAGNTIDALARASLLYAVQHLHSPLVVVLGHEKCGAVTAALQPPEALAEAPRDIKTLVKKIQSGIECALLEPGLEDVDDE--RLLCAIVCNVHSVARTLSEHPDIRPFIEQKALSVVGAYYAF-NGVVSFFDDGED 283
            S D V++++++ED  + ++G     T  EA+  LK GNA F   +   +    +    L  +Q P AI++ CSDSRVP EMIF+  FG++F IRLAGN     A  S+ YAV+HL   L+VV+GHE CGAV AA+   E LAE P +++ LV++I+  +       G+  + DE  R+  A++ NV S    L E+P ++   +  +L V+GA+Y   +G V F    ED
Sbjct:   12 SLDAVRSRSSMED--IAKQGGPQVATPDEAITALKRGNARFFSGQTTQQSLGVNERRALIMSQTPFAIVLGCSDSRVPTEMIFDQGFGDIFSIRLAGNVASGAALGSVEYAVKHLKCRLLVVMGHEGCGAVKAAMLGDEVLAEEPENVRLLVERIRPALR------GMPRIRDEKARMREAVISNVRSQVALLRENPVVQRATQAGSLKVIGAFYEIGSGAVDFLISDED 233          
BLAST of EWM29063.1 vs. NCBI_GenBank
Match: gi|503423721|ref|WP_013658382.1| (carbonic anhydrase [Cellulosilyticum lentocellum] >gi|326543247|gb|ADZ85106.1| carbonic anhydrase [Clostridium lentocellum DSM 5427])

HSP 1 Score: 146.747 bits (369), Expect = 7.747e-39
Identity = 85/213 (39.91%), Postives = 113/213 (53.05%), Query Frame = 0
Query:   70 TTLEDSPLERKGNTAAEALELLKAGNAAFLRDEVPAKQC---SDRHIGLHFAQKPHAIIIACSDSRVPPEMIFNCAFGELFVIRLAGNTIDALARASLLYAVQHLHSPLVVVLGHEKCGAVTAALQPPEALAEAPRDIKTLVKKIQSGIECALLEPGLEDVDDERLLCAIVCNVHSVARTLSEHPDIRPFIEQKALSVVGAYYAFNGVVSFFD 279
            T ++   +E    T+ EAL LLKAGN  F  +E  ++Q    ++R   L   Q P+A+I+ CSDSRV P  +FN   GELF IR AGN +D     S+ Y  +HL +PL+VVLGHE CGAVTA         E    I  +VK+I   I     E     V+D     AI  N+  V   + E   I+  IE+  + V+GAYY  NG V+F D
Sbjct:   24 TAVQSQTVETTVKTSDEALALLKAGNERFYENE--SRQVNINAERRETLTKGQDPYAVIVGCSDSRVTPTHLFNAGLGELFEIRTAGNVLDDTTLGSIEYGAEHLETPLIVVLGHENCGAVTATYDAVVKKQEVEGHIADIVKRITPSI----TETNASSVED-----AIYQNIKDVEEQIKEDAVIKELIEEGKVKVIGAYYNLNGKVTFLD 225          
The following BLAST results are available for this feature:
BLAST of EWM29063.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111582|gb|EWM29063.1|0.000e+0100.00carbonic anhydrase [Nannochloropsis gaditana][more]
gi|1053040427|emb|SCK04018.1|1.152e-4437.72Carbonic anhydrase [uncultured Clostridium sp.][more]
gi|692298047|ref|WP_032119031.1|2.505e-4337.72carbonic anhydrase [Clostridium sp. CL-2][more]
gi|942018587|ref|WP_055268145.1|1.489e-4139.91carbonic anhydrase [Clostridium disporicum] >gi|93... [more]
gi|755041541|ref|WP_042394057.1|4.996e-4042.86carbonic anhydrase [Clostridium saudiense][more]
gi|1052927225|emb|SCJ94464.1|6.805e-4042.86Carbonic anhydrase [uncultured Clostridium sp.][more]
gi|942084548|ref|WP_055291522.1|8.787e-4042.86carbonic anhydrase [Clostridium disporicum] >gi|93... [more]
gi|1052921441|emb|SCJ12850.1|1.629e-3942.35Carbonic anhydrase [uncultured Clostridium sp.][more]
gi|505049233|ref|WP_015236335.1|2.385e-3938.26carbonic anhydrase [Deinococcus peraridilitoris] >... [more]
gi|503423721|ref|WP_013658382.1|7.747e-3939.91carbonic anhydrase [Cellulosilyticum lentocellum] ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1628rna1628Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications