EWM29052.1, cds1621 (CDS) Nannochloropsis gaditana

Overview
NameEWM29052.1
Unique Namecds1621
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:1090929..1092872 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29052.1
ProductPeptidase aspartic
Orig transcript idgnl|cribi|Naga_100024g9.4310.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:1090929..1092872 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0004190aspartic-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0019538protein metabolic process
GO:0006508proteolysis
Vocabulary: INTERPRO
TermDefinition
IPR021109Peptidase_aspartic_dom
IPR001461Aspartic_peptidase
Homology
BLAST of EWM29052.1 vs. NCBI_GenBank
Match: gi|585111571|gb|EWM29052.1| (Peptidase aspartic [Nannochloropsis gaditana])

HSP 1 Score: 1332.78 bits (3448), Expect = 0.000e+0
Identity = 647/647 (100.00%), Postives = 647/647 (100.00%), Query Frame = 0
Query:    1 MPRIKFFSTPLLTIYFALQAFQRSSSLIIPLERRQPAASVSPFFPLSQDKSSSSGTIPTHLQAFVPGLPAYFARLSFGNDAQAIDVLVDTGSFDLLIPSDLCTACSHVSQRLNVASAGVDFVHCGDAMRCHGQCMPDVLNSFGSTSQTIPPQLYCGPHGGICEAGSNLCLFDDNYADGSYASGVVVTAPSVNFSGVTLKDVTFGAIASASDTFFEAPQGGGIMGMAYRGSAVSTRANARGNLDQPVTKKDVVGCDGETPCMVPLLDALIAQQEQGVGGQVRDIFAIYGHPTSPVMLLGESSLGIESQEYYEGELQYARMEAPYGLYMVGVAGLGVVEAPGMDVPKGVAEAGSTFMLHQGNAGLAIIDTGATGLYFPCSAYLKLKTYLQTHYCHVPFICGPLPTPTPELSDSEAAAVKGKQQERDHSHRALRSRRHHRHHQQPSQEEAQEEDEPPPSTIFESNIWAKYDEATVARLPTLTIRLEDGGIELRLSPQQYLIRNVMLSGVTGMDGQEKTDIAYYQFGIRTFGEGVAGGSQRRRMVSDQASRKSERGPEAFQREKYEGMLPGTSITRDGTHRGSVRPNKNNGSPRELYILGELLLNQMFVVFDRDKRRVGFAPAAARDPSLKPSSPEFVVVPPGNGTANTNV 647
            MPRIKFFSTPLLTIYFALQAFQRSSSLIIPLERRQPAASVSPFFPLSQDKSSSSGTIPTHLQAFVPGLPAYFARLSFGNDAQAIDVLVDTGSFDLLIPSDLCTACSHVSQRLNVASAGVDFVHCGDAMRCHGQCMPDVLNSFGSTSQTIPPQLYCGPHGGICEAGSNLCLFDDNYADGSYASGVVVTAPSVNFSGVTLKDVTFGAIASASDTFFEAPQGGGIMGMAYRGSAVSTRANARGNLDQPVTKKDVVGCDGETPCMVPLLDALIAQQEQGVGGQVRDIFAIYGHPTSPVMLLGESSLGIESQEYYEGELQYARMEAPYGLYMVGVAGLGVVEAPGMDVPKGVAEAGSTFMLHQGNAGLAIIDTGATGLYFPCSAYLKLKTYLQTHYCHVPFICGPLPTPTPELSDSEAAAVKGKQQERDHSHRALRSRRHHRHHQQPSQEEAQEEDEPPPSTIFESNIWAKYDEATVARLPTLTIRLEDGGIELRLSPQQYLIRNVMLSGVTGMDGQEKTDIAYYQFGIRTFGEGVAGGSQRRRMVSDQASRKSERGPEAFQREKYEGMLPGTSITRDGTHRGSVRPNKNNGSPRELYILGELLLNQMFVVFDRDKRRVGFAPAAARDPSLKPSSPEFVVVPPGNGTANTNV
Sbjct:    1 MPRIKFFSTPLLTIYFALQAFQRSSSLIIPLERRQPAASVSPFFPLSQDKSSSSGTIPTHLQAFVPGLPAYFARLSFGNDAQAIDVLVDTGSFDLLIPSDLCTACSHVSQRLNVASAGVDFVHCGDAMRCHGQCMPDVLNSFGSTSQTIPPQLYCGPHGGICEAGSNLCLFDDNYADGSYASGVVVTAPSVNFSGVTLKDVTFGAIASASDTFFEAPQGGGIMGMAYRGSAVSTRANARGNLDQPVTKKDVVGCDGETPCMVPLLDALIAQQEQGVGGQVRDIFAIYGHPTSPVMLLGESSLGIESQEYYEGELQYARMEAPYGLYMVGVAGLGVVEAPGMDVPKGVAEAGSTFMLHQGNAGLAIIDTGATGLYFPCSAYLKLKTYLQTHYCHVPFICGPLPTPTPELSDSEAAAVKGKQQERDHSHRALRSRRHHRHHQQPSQEEAQEEDEPPPSTIFESNIWAKYDEATVARLPTLTIRLEDGGIELRLSPQQYLIRNVMLSGVTGMDGQEKTDIAYYQFGIRTFGEGVAGGSQRRRMVSDQASRKSERGPEAFQREKYEGMLPGTSITRDGTHRGSVRPNKNNGSPRELYILGELLLNQMFVVFDRDKRRVGFAPAAARDPSLKPSSPEFVVVPPGNGTANTNV 647          
BLAST of EWM29052.1 vs. NCBI_GenBank
Match: gi|1189380127|gb|OSX68580.1| (hypothetical protein BU14_2546s0001, partial [Porphyra umbilicalis])

HSP 1 Score: 91.6633 bits (226), Expect = 4.315e-16
Identity = 122/488 (25.00%), Postives = 176/488 (36.07%), Query Frame = 0
Query:   71 YFARLSFGNDAQAIDVLVDTGSFDLLIPSDLCTACSHVSQRLNVA-------------------------------SAGVDFVHCGDAMRCHGQCMPDVLNSFGSTSQTIPPQLYCGPHGGICEAGSNLCLFDDNYADGSYASGVVVTAPSVNFSGVTLKDVTFGAIASASDTFFEAPQGGGIMGMAYRGSAVSTRANARGNLDQPVTKKDVVGCDGETPCMVPLLDALIAQQEQGVGGQVRDIFAIYGHPTSPVMLLGESSLGIESQEYYEGELQYARM-----EAPYGLYMVGVAGLGVVEAPGMDVPKGVAEAGSTFMLHQGNAGLAIIDTGATGLYFPCSAYLKLKTYLQTHYCHVPFICGPLPTPTPELSDSEAAAVKGKQQERDHSHRALRSRRHHRHHQQPSQEEAQEEDEPPPSTIFESNIWAKYDEATVARLPTLTIRLEDGGIELRLSPQQYLIRNVM------LSGVTGMDGQEKTD 516
            YF  L+ G+    + V +DTGS  L +P D C  C   ++RL V                                S   + V CG        C  D  +++       P +  C             C F   YAD S A G +VTAP V  + V+   +TFG I + +  F E P   GI+G+AY   A +                          C+ PL+DAL A      G    D F I           G  +LG      Y+G+L Y  +       P   Y V V+G+     P ++VP               +   AI+D+G T +    +A+  LK + QTHYCHVP +C P+P P            +G+ +                                  +T F+    A   +A VA LPTLT  L  GG+ L L P +Y++R           G+T +DG +  +
Sbjct:    4 YFLALAVGSPPVDVHVQIDTGSSTLALPLDPCVTCRKDARRLPVGPLPPPALAGPAAGIHGGSGGGGAGAAAAGAPSVPSELVPCGSP-----TCGADTCDAYAICRTCSPARRAC-----CAPDAPGACAFFLRYADESGARGALVTAP-VGVANVS-TGLTFGGILADTPDF-ERPLVDGILGLAYPPLACNPT------------------------CVTPLVDALFAD-----GQLAADAFGICTGRAG-----GTLTLGGADGSLYDGDLAYVPLAPRSRHRPRLFYDVLVSGVTAGGVP-LEVP---------------DLATAIVDSGTTVVVLAPAAFGALKAHFQTHYCHVPGLCPPVPAP------------RGRVE----------------------------------ATWFQPGYCATLSDADVAGLPTLTFHL--GGVGLSLEPSEYMLRFAAGRLVYRCLGITFLDGLQSQE 380          
BLAST of EWM29052.1 vs. NCBI_GenBank
Match: gi|545712164|ref|XP_005708387.1| (aspartyl protease [Galdieria sulphuraria] >gi|452824867|gb|EME31867.1| aspartyl protease [Galdieria sulphuraria])

HSP 1 Score: 79.337 bits (194), Expect = 1.011e-11
Identity = 89/364 (24.45%), Postives = 146/364 (40.11%), Query Frame = 0
Query:   65 VPGLPAYFARLSFGNDAQAIDVLVDTGSFDLLIPSDLCTACSHVSQRLNVASAGVDFVHCGDAMRCHGQCMPDVLNSFGSTSQTIPPQLYCGPHGGIC--EAGSNLCLFDDNYADGSYASGVVVTAPSVNFSGVTLKDVTFGAIASASDTFFEAPQGGGIMGMAYRGSAVSTRANARGNLDQPVTKKDVVGCDGETPCMVPLLDALIAQQEQGVGGQVRDIFAIYGHPTSPVMLLGESSLGIESQEYYEGELQYARM---EAPYGLYMVGVAGLGVVEAPGMDVPKGVAEAGSTFMLHQGNAGLAIIDTGATGLYFPCSAYLKLKTYLQTHYCHVPFICGPLPTPTPELSDSEAAAVKGKQQER 423
            V  +  Y+  L  G   Q I V VDTGS  + +P   C  C    +R        DF  C +A R  G+ +P   +  G+ +        C      C  +  ++ C F   Y DG++A G V+   +V  + +T K   FG I   S + FE  +  G+ G+A+                       ++ C+    C+ P+ D ++ +     G   RDIF+I+    + V++LG S         Y+G L+Y+ +     P   Y V    +  V    +D+P               +   A++D+G T +     ++L LK Y Q HYC+V  +CG    P     D +  A+    + R
Sbjct:  145 VVSVGMYYIELDVGC-GQIIHVQVDTGSSTMAVPLSECVNCKQHDRRY-------DFSKCPNATR--GEKIPCDSDICGANTCYSSYCGSCSASTAACCSQVDNSKCGFILRYGDGAFAQGTVI-HETVTIANITFK-TYFGGILKDSPS-FELTEVDGVFGLAF----------------------PLLACN--PTCLTPVFDDMVQK-----GLVERDIFSIHSDLENGVLVLGGS-----DDRLYDGTLEYSPLINANEP-EFYEVECEEV-TVSGTNVDLP---------------HFKTAVVDSGTTLIILSLDSFLALKRYFQAHYCNVSGLCGEDGDPDLSWFDPDYCALLEDSEIR 444          
BLAST of EWM29052.1 vs. NCBI_GenBank
Match: gi|546297435|ref|XP_005710223.1| (unnamed protein product [Chondrus crispus] >gi|507106268|emb|CDF39929.1| unnamed protein product [Chondrus crispus])

HSP 1 Score: 72.7886 bits (177), Expect = 1.205e-9
Identity = 91/379 (24.01%), Postives = 152/379 (40.11%), Query Frame = 0
Query:   28 IIPLERRQPAASVSPFFPLSQDKSSSSGTIPTHLQAFVPGLPA---YFARLSFGNDAQAIDVLVDTGSFDLLIPSDLCTACSHVSQRLNV--ASAGVDF-VHCGDAMRCHGQCMPDVLNSFGSTSQTIPPQLYCGPHGGIC-EAGSNLCLFDDNYADGSYASGVVVTAPSVNFSGVTLKDVTFGAIASASDTFFEAPQGGGIMGMAYRGSAVSTRANARGNLDQPVTKKDVVGCDGETPCMVPLLDALIAQQEQGVGGQVRDIFAIYGHPTSPVMLLGESSLGIESQEYYEGELQYARMEAPYGLYMVGVAGLGVVEAPGMDVPKGVAEAGSTFMLHQGNAGLAIIDTGATGLYFPCSAYLKLKTYLQTHYCHVPFICG 399
            I PL RR P   ++ F   ++ +S    T   H      G+ A   Y+A++  G   Q + V +DTGS  L +P   C  C     R ++  +++G+   + C D       C P     FG  +        C      C ++  + C F  N+ DGS A G+++    + +  V    VTFG I S S   FE  Q  GI+GMAY                        + C+    C+ P  ++L  +        ++ +F I     S  ++LG+    + +Q+     L+ +   + Y   +VG   +   + P     +                  AI+D+G T + F  + + K K +LQ++YC VP +CG
Sbjct:   62 IDPLSRRFP--KLTGFLVRNRLRSRMPVTTRFHNVQLYGGMVAVGEYYAKVKIG--GQTLRVQIDTGSATLAVPVKECENCKRGDMRYSIDDSNSGIATQIGCDDEACSDNTCSP-----FGCGA--------CSSSKACCAKSDHSKCAFHLNFGDGSGAKGILIR-DELEWGDVKFP-VTFGGIRSDSPD-FERSQVDGILGMAY----------------------PTLACN--PSCITPTFESLREKV------PMKSLFTICITYDSGQIILGDYDPALSTQKISWVPLELSNPPSFYSFPLVGNLKVNDHDLPLPSYTR------------------AIVDSGTTLIVFSHATFEKFKKHLQSNYCDVPGLCG 372          
BLAST of EWM29052.1 vs. NCBI_GenBank
Match: gi|544214365|ref|XP_005537329.1| (pepsin A precursor [Cyanidioschyzon merolae strain 10D] >gi|449017891|dbj|BAM81293.1| pepsin A precursor [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 71.633 bits (174), Expect = 1.971e-9
Identity = 98/394 (24.87%), Postives = 156/394 (39.59%), Query Frame = 0
Query:   27 LIIPLERR---------------QPAASVSPFFPLSQDKSSSSGTIPTH-LQAFVPGLPAYFARLSFGNDAQAIDVLVDTGSFDLLIPSDLCTACSHVSQRLNVASAGVDFVHCGDAMRCHGQCMPDVLNSF-GSTSQTIPPQLYCGPHGGICEAGSNLCLFDDNYADGSYASGVV-VTAPSVNFSGVTLKDVTFGAIASASDTFFEAPQGGGIMGMAYRGSAVSTRANARGNLDQPVTKKDVVGCDGETPCMVPLLDALIAQQEQGVGGQVRDIFAIYGHPTSPVMLLGESSLGIESQEYYEGELQYARM--EAPYGLYMVGVAGLGVVEAPGMDVPKGVAEAGSTFMLHQGNAGLAIIDTGATGLYFPCSAYLKLKTYLQTHYC-HVPFICG 399
            +++PLE+R               + AA + P        SS    +P + L   +  +  Y+  +S  N  Q + V +DTGS  +  P   C  C    +R+ +A+  +  + C +       C P   NS  G+ S+    +  C P        +  C F   Y DGS+A G + V   ++  +G+++    FG I   S + FE     GI G+AY   A +                          C+ P+ D ++       G   RD+FA+    TS  ++ G    G    E  +GE ++  M   A    Y VGV  +      G D   G+ E  S           AI+D+G T +    SA+  L+ +LQ+ YC  VP +CG
Sbjct:   43 IVLPLEKRPGTVERIYSAPRRHGELAALLRPAVSGVPGGSSQEDKLPVNPLAGGIVNVGEYYVAISVDN--QTVHVQIDTGSSAIAFPLSQCKNCLKGDRRVTLANPDLTRISCSN----ESICKPSTCNSLCGACSEA--SKACCAP------VDTKACGFRLIYGDGSFAIGALHVGRITLTQTGLSVYPAYFGGILLDSAS-FEHVDVDGIWGLAYPSLACN------------------------PSCVPPVFDTMVRT-----GVVPRDMFALCLTDTSGALVFG----GAAGPEMRKGEYRWVPMVNRAVRTYYEVGVESVRF----GTDESAGLPEIRS-----------AIVDSGTTLIVISTSAFGTLREHLQSRYCDQVPGLCG 373          
BLAST of EWM29052.1 vs. NCBI_GenBank
Match: gi|1189381160|gb|OSX69083.1| (hypothetical protein BU14_1889s0001 [Porphyra umbilicalis])

HSP 1 Score: 71.633 bits (174), Expect = 2.567e-9
Identity = 93/349 (26.65%), Postives = 138/349 (39.54%), Query Frame = 0
Query:   61 LQAFVPGLPAYFARLSFGNDAQAIDVLVDTGSFDLLIPSDLCTACSHVSQRLNVASAGV---DFVHCGD----AMRCHGQCMPDVLNSFGSTSQTIPPQLYCGPHGGICE-AGSNLCLFDDNYADGSYASGVVVTAPSVNFSGVTLKDVTFGAIASASDTFFEAPQGGGIMGMAYRGSAVSTRANARGNLDQPVTKKDVVGCDGETPCMVPLLDALIAQQEQGVGGQVRDIFAIYGHPTSPVMLLGESSLGIESQEYYEGELQYAR--MEAPYGLYMVGVAG-LGVVEAPGMDVPKGVAEAGSTFMLHQGNAGLAIIDTGATGLYFPCSAYLKLKTYLQTHYCHVPFIC 398
            L   + G+  Y+  +  G   +A+ V VDTGS  L +P   C +C +     + A + V     + CGD    A RC  +C                    CG +G  C       C F   YADGS ASG +V+   + +  ++ + VTFG I   S   FE     GI+GMAY+  A +                          C+ P  D L+A       G V D+F+I           G+  LG   +   +  +Q+A   +  P   Y V + G L + +A   DVP               N   AI+DTG T +      +  ++ +LQ+ YCHVP +C
Sbjct:  254 LHGGIVGVGEYYTIVRLGG--KAMRVQVDTGSATLAVPMKGCKSCINQKHGYSTAESPVADARALPCGDEACQASRCTARCK------------------TCGANGACCSTVRPKECGFFLRYADGSAASGSLVSD-ELRWGNLSTR-VTFGGILHNSPD-FERYDVDGILGMAYKSLACNPT------------------------CVDPPFDLLVAS------GDVADVFSICMTAHG-----GKLVLGGMDERLVQSPVQWAPLFLSEPARYYRVHLGGSLKIGDA---DVP-------------LPNFRHAIVDTGTTLIVTSKRTFDAIRLHLQSQYCHVPELC 528          
BLAST of EWM29052.1 vs. NCBI_GenBank
Match: gi|545712166|ref|XP_005708388.1| (aspartyl protease [Galdieria sulphuraria] >gi|452824868|gb|EME31868.1| aspartyl protease [Galdieria sulphuraria])

HSP 1 Score: 70.4774 bits (171), Expect = 4.998e-9
Identity = 95/385 (24.68%), Postives = 157/385 (40.78%), Query Frame = 0
Query:   60 HLQAFVPGLPAYFARLSFGNDAQAIDVLVDTGSFDLLIPSDLCTACSHVSQRLNVASAGVDFVHCGDAM-------RCHGQCMPDVLNSFGSTSQTIPPQLYCGPHGGICEAGSNLCLFDDNYADGSYASGVVVTAPSVNFSGVTLKDVTFGAIASASDTFFEAPQGGGIMGMAYRGSAVSTRANARGNLDQPVTKKDVVGCDGETPCMVPLLDALIAQQEQGVGGQVRDIFAIYGHPTSPVMLLGESSLGIESQEYYEGELQYARME--APYGLYMVGVAGLGVVEAPGMDVPKGVAEAGSTFMLHQGNAGLAIIDTGATGLYFPCSAYLKLKTYLQTHYCHVPFICGPLPTPTPELSDSEAAAVKGKQQERDHSHRALRSRRH 435
            +L+  +  +  Y+  +S G   Q + VL+DTGS  L + S      S +  R N    G+ F +   +        +C        L    S S      L  G   G        C F+  Y DGS ASG++    +V+ SG+  K  + GAI + +  F +  +  GI+G+A+   A +                          C+ P  D L++Q+       + DIF+I    +S  ++LG    GI+    Y G + Y  ME  +    Y+V   GL V                   +L++ +  +A +D+G T L F  + Y  L++Y Q+HYC VP +C    + T   S S    V  +QQ ++    +L+ + +
Sbjct:  133 NLEGGLITVGGYYTNISVG--GQDVYVLIDTGSSTLAVIS------SDIEGRTN----GIPFFNSSSSTMISCSSPQCQSNTCSSSLCQTNSCSSNQACCLNLGDKSG--------CFFNLQYGDGSGASGILF-EDNVSLSGMAAK-CSIGAIVNDTKGF-QVGEALGILGLAFSRLACNP------------------------TCITPFFDELVSQEN------ITDIFSISLSLSSGTLVLG----GID-HSLYSGPVNYVPMENRSSNTYYIVASNGLSV----------------DGTVLNETDGMMAAVDSGTTTLVFDEATYELLRSYFQSHYCSVPGLCPSAGSNTTWFS-SNFCVVLDEQQLQNLPSISLQLKNN 442          
The following BLAST results are available for this feature:
BLAST of EWM29052.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 7
Match NameE-valueIdentityDescription
gi|585111571|gb|EWM29052.1|0.000e+0100.00Peptidase aspartic [Nannochloropsis gaditana][more]
gi|1189380127|gb|OSX68580.1|4.315e-1625.00hypothetical protein BU14_2546s0001, partial [Porp... [more]
gi|545712164|ref|XP_005708387.1|1.011e-1124.45aspartyl protease [Galdieria sulphuraria] >gi|4528... [more]
gi|546297435|ref|XP_005710223.1|1.205e-924.01unnamed protein product [Chondrus crispus] >gi|507... [more]
gi|544214365|ref|XP_005537329.1|1.971e-924.87pepsin A precursor [Cyanidioschyzon merolae strain... [more]
gi|1189381160|gb|OSX69083.1|2.567e-926.65hypothetical protein BU14_1889s0001 [Porphyra umbi... [more]
gi|545712166|ref|XP_005708388.1|4.998e-924.68aspartyl protease [Galdieria sulphuraria] >gi|4528... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1625rna1625Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications