EWM29052.1, cds1621 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29052.1 vs. NCBI_GenBank
Match: gi|585111571|gb|EWM29052.1| (Peptidase aspartic [Nannochloropsis gaditana]) HSP 1 Score: 1332.78 bits (3448), Expect = 0.000e+0 Identity = 647/647 (100.00%), Postives = 647/647 (100.00%), Query Frame = 0
Query: 1 MPRIKFFSTPLLTIYFALQAFQRSSSLIIPLERRQPAASVSPFFPLSQDKSSSSGTIPTHLQAFVPGLPAYFARLSFGNDAQAIDVLVDTGSFDLLIPSDLCTACSHVSQRLNVASAGVDFVHCGDAMRCHGQCMPDVLNSFGSTSQTIPPQLYCGPHGGICEAGSNLCLFDDNYADGSYASGVVVTAPSVNFSGVTLKDVTFGAIASASDTFFEAPQGGGIMGMAYRGSAVSTRANARGNLDQPVTKKDVVGCDGETPCMVPLLDALIAQQEQGVGGQVRDIFAIYGHPTSPVMLLGESSLGIESQEYYEGELQYARMEAPYGLYMVGVAGLGVVEAPGMDVPKGVAEAGSTFMLHQGNAGLAIIDTGATGLYFPCSAYLKLKTYLQTHYCHVPFICGPLPTPTPELSDSEAAAVKGKQQERDHSHRALRSRRHHRHHQQPSQEEAQEEDEPPPSTIFESNIWAKYDEATVARLPTLTIRLEDGGIELRLSPQQYLIRNVMLSGVTGMDGQEKTDIAYYQFGIRTFGEGVAGGSQRRRMVSDQASRKSERGPEAFQREKYEGMLPGTSITRDGTHRGSVRPNKNNGSPRELYILGELLLNQMFVVFDRDKRRVGFAPAAARDPSLKPSSPEFVVVPPGNGTANTNV 647
MPRIKFFSTPLLTIYFALQAFQRSSSLIIPLERRQPAASVSPFFPLSQDKSSSSGTIPTHLQAFVPGLPAYFARLSFGNDAQAIDVLVDTGSFDLLIPSDLCTACSHVSQRLNVASAGVDFVHCGDAMRCHGQCMPDVLNSFGSTSQTIPPQLYCGPHGGICEAGSNLCLFDDNYADGSYASGVVVTAPSVNFSGVTLKDVTFGAIASASDTFFEAPQGGGIMGMAYRGSAVSTRANARGNLDQPVTKKDVVGCDGETPCMVPLLDALIAQQEQGVGGQVRDIFAIYGHPTSPVMLLGESSLGIESQEYYEGELQYARMEAPYGLYMVGVAGLGVVEAPGMDVPKGVAEAGSTFMLHQGNAGLAIIDTGATGLYFPCSAYLKLKTYLQTHYCHVPFICGPLPTPTPELSDSEAAAVKGKQQERDHSHRALRSRRHHRHHQQPSQEEAQEEDEPPPSTIFESNIWAKYDEATVARLPTLTIRLEDGGIELRLSPQQYLIRNVMLSGVTGMDGQEKTDIAYYQFGIRTFGEGVAGGSQRRRMVSDQASRKSERGPEAFQREKYEGMLPGTSITRDGTHRGSVRPNKNNGSPRELYILGELLLNQMFVVFDRDKRRVGFAPAAARDPSLKPSSPEFVVVPPGNGTANTNV
Sbjct: 1 MPRIKFFSTPLLTIYFALQAFQRSSSLIIPLERRQPAASVSPFFPLSQDKSSSSGTIPTHLQAFVPGLPAYFARLSFGNDAQAIDVLVDTGSFDLLIPSDLCTACSHVSQRLNVASAGVDFVHCGDAMRCHGQCMPDVLNSFGSTSQTIPPQLYCGPHGGICEAGSNLCLFDDNYADGSYASGVVVTAPSVNFSGVTLKDVTFGAIASASDTFFEAPQGGGIMGMAYRGSAVSTRANARGNLDQPVTKKDVVGCDGETPCMVPLLDALIAQQEQGVGGQVRDIFAIYGHPTSPVMLLGESSLGIESQEYYEGELQYARMEAPYGLYMVGVAGLGVVEAPGMDVPKGVAEAGSTFMLHQGNAGLAIIDTGATGLYFPCSAYLKLKTYLQTHYCHVPFICGPLPTPTPELSDSEAAAVKGKQQERDHSHRALRSRRHHRHHQQPSQEEAQEEDEPPPSTIFESNIWAKYDEATVARLPTLTIRLEDGGIELRLSPQQYLIRNVMLSGVTGMDGQEKTDIAYYQFGIRTFGEGVAGGSQRRRMVSDQASRKSERGPEAFQREKYEGMLPGTSITRDGTHRGSVRPNKNNGSPRELYILGELLLNQMFVVFDRDKRRVGFAPAAARDPSLKPSSPEFVVVPPGNGTANTNV 647
BLAST of EWM29052.1 vs. NCBI_GenBank
Match: gi|1189380127|gb|OSX68580.1| (hypothetical protein BU14_2546s0001, partial [Porphyra umbilicalis]) HSP 1 Score: 91.6633 bits (226), Expect = 4.315e-16 Identity = 122/488 (25.00%), Postives = 176/488 (36.07%), Query Frame = 0
Query: 71 YFARLSFGNDAQAIDVLVDTGSFDLLIPSDLCTACSHVSQRLNVA-------------------------------SAGVDFVHCGDAMRCHGQCMPDVLNSFGSTSQTIPPQLYCGPHGGICEAGSNLCLFDDNYADGSYASGVVVTAPSVNFSGVTLKDVTFGAIASASDTFFEAPQGGGIMGMAYRGSAVSTRANARGNLDQPVTKKDVVGCDGETPCMVPLLDALIAQQEQGVGGQVRDIFAIYGHPTSPVMLLGESSLGIESQEYYEGELQYARM-----EAPYGLYMVGVAGLGVVEAPGMDVPKGVAEAGSTFMLHQGNAGLAIIDTGATGLYFPCSAYLKLKTYLQTHYCHVPFICGPLPTPTPELSDSEAAAVKGKQQERDHSHRALRSRRHHRHHQQPSQEEAQEEDEPPPSTIFESNIWAKYDEATVARLPTLTIRLEDGGIELRLSPQQYLIRNVM------LSGVTGMDGQEKTD 516
YF L+ G+ + V +DTGS L +P D C C ++RL V S + V CG C D +++ P + C C F YAD S A G +VTAP V + V+ +TFG I + + F E P GI+G+AY A + C+ PL+DAL A G D F I G +LG Y+G+L Y + P Y V V+G+ P ++VP + AI+D+G T + +A+ LK + QTHYCHVP +C P+P P +G+ + +T F+ A +A VA LPTLT L GG+ L L P +Y++R G+T +DG + +
Sbjct: 4 YFLALAVGSPPVDVHVQIDTGSSTLALPLDPCVTCRKDARRLPVGPLPPPALAGPAAGIHGGSGGGGAGAAAAGAPSVPSELVPCGSP-----TCGADTCDAYAICRTCSPARRAC-----CAPDAPGACAFFLRYADESGARGALVTAP-VGVANVS-TGLTFGGILADTPDF-ERPLVDGILGLAYPPLACNPT------------------------CVTPLVDALFAD-----GQLAADAFGICTGRAG-----GTLTLGGADGSLYDGDLAYVPLAPRSRHRPRLFYDVLVSGVTAGGVP-LEVP---------------DLATAIVDSGTTVVVLAPAAFGALKAHFQTHYCHVPGLCPPVPAP------------RGRVE----------------------------------ATWFQPGYCATLSDADVAGLPTLTFHL--GGVGLSLEPSEYMLRFAAGRLVYRCLGITFLDGLQSQE 380
BLAST of EWM29052.1 vs. NCBI_GenBank
Match: gi|545712164|ref|XP_005708387.1| (aspartyl protease [Galdieria sulphuraria] >gi|452824867|gb|EME31867.1| aspartyl protease [Galdieria sulphuraria]) HSP 1 Score: 79.337 bits (194), Expect = 1.011e-11 Identity = 89/364 (24.45%), Postives = 146/364 (40.11%), Query Frame = 0
Query: 65 VPGLPAYFARLSFGNDAQAIDVLVDTGSFDLLIPSDLCTACSHVSQRLNVASAGVDFVHCGDAMRCHGQCMPDVLNSFGSTSQTIPPQLYCGPHGGIC--EAGSNLCLFDDNYADGSYASGVVVTAPSVNFSGVTLKDVTFGAIASASDTFFEAPQGGGIMGMAYRGSAVSTRANARGNLDQPVTKKDVVGCDGETPCMVPLLDALIAQQEQGVGGQVRDIFAIYGHPTSPVMLLGESSLGIESQEYYEGELQYARM---EAPYGLYMVGVAGLGVVEAPGMDVPKGVAEAGSTFMLHQGNAGLAIIDTGATGLYFPCSAYLKLKTYLQTHYCHVPFICGPLPTPTPELSDSEAAAVKGKQQER 423
V + Y+ L G Q I V VDTGS + +P C C +R DF C +A R G+ +P + G+ + C C + ++ C F Y DG++A G V+ +V + +T K FG I S + FE + G+ G+A+ ++ C+ C+ P+ D ++ + G RDIF+I+ + V++LG S Y+G L+Y+ + P Y V + V +D+P + A++D+G T + ++L LK Y Q HYC+V +CG P D + A+ + R
Sbjct: 145 VVSVGMYYIELDVGC-GQIIHVQVDTGSSTMAVPLSECVNCKQHDRRY-------DFSKCPNATR--GEKIPCDSDICGANTCYSSYCGSCSASTAACCSQVDNSKCGFILRYGDGAFAQGTVI-HETVTIANITFK-TYFGGILKDSPS-FELTEVDGVFGLAF----------------------PLLACN--PTCLTPVFDDMVQK-----GLVERDIFSIHSDLENGVLVLGGS-----DDRLYDGTLEYSPLINANEP-EFYEVECEEV-TVSGTNVDLP---------------HFKTAVVDSGTTLIILSLDSFLALKRYFQAHYCNVSGLCGEDGDPDLSWFDPDYCALLEDSEIR 444
BLAST of EWM29052.1 vs. NCBI_GenBank
Match: gi|546297435|ref|XP_005710223.1| (unnamed protein product [Chondrus crispus] >gi|507106268|emb|CDF39929.1| unnamed protein product [Chondrus crispus]) HSP 1 Score: 72.7886 bits (177), Expect = 1.205e-9 Identity = 91/379 (24.01%), Postives = 152/379 (40.11%), Query Frame = 0
Query: 28 IIPLERRQPAASVSPFFPLSQDKSSSSGTIPTHLQAFVPGLPA---YFARLSFGNDAQAIDVLVDTGSFDLLIPSDLCTACSHVSQRLNV--ASAGVDF-VHCGDAMRCHGQCMPDVLNSFGSTSQTIPPQLYCGPHGGIC-EAGSNLCLFDDNYADGSYASGVVVTAPSVNFSGVTLKDVTFGAIASASDTFFEAPQGGGIMGMAYRGSAVSTRANARGNLDQPVTKKDVVGCDGETPCMVPLLDALIAQQEQGVGGQVRDIFAIYGHPTSPVMLLGESSLGIESQEYYEGELQYARMEAPYGLYMVGVAGLGVVEAPGMDVPKGVAEAGSTFMLHQGNAGLAIIDTGATGLYFPCSAYLKLKTYLQTHYCHVPFICG 399
I PL RR P ++ F ++ +S T H G+ A Y+A++ G Q + V +DTGS L +P C C R ++ +++G+ + C D C P FG + C C ++ + C F N+ DGS A G+++ + + V VTFG I S S FE Q GI+GMAY + C+ C+ P ++L + ++ +F I S ++LG+ + +Q+ L+ + + Y +VG + + P + AI+D+G T + F + + K K +LQ++YC VP +CG
Sbjct: 62 IDPLSRRFP--KLTGFLVRNRLRSRMPVTTRFHNVQLYGGMVAVGEYYAKVKIG--GQTLRVQIDTGSATLAVPVKECENCKRGDMRYSIDDSNSGIATQIGCDDEACSDNTCSP-----FGCGA--------CSSSKACCAKSDHSKCAFHLNFGDGSGAKGILIR-DELEWGDVKFP-VTFGGIRSDSPD-FERSQVDGILGMAY----------------------PTLACN--PSCITPTFESLREKV------PMKSLFTICITYDSGQIILGDYDPALSTQKISWVPLELSNPPSFYSFPLVGNLKVNDHDLPLPSYTR------------------AIVDSGTTLIVFSHATFEKFKKHLQSNYCDVPGLCG 372
BLAST of EWM29052.1 vs. NCBI_GenBank
Match: gi|544214365|ref|XP_005537329.1| (pepsin A precursor [Cyanidioschyzon merolae strain 10D] >gi|449017891|dbj|BAM81293.1| pepsin A precursor [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 71.633 bits (174), Expect = 1.971e-9 Identity = 98/394 (24.87%), Postives = 156/394 (39.59%), Query Frame = 0
Query: 27 LIIPLERR---------------QPAASVSPFFPLSQDKSSSSGTIPTH-LQAFVPGLPAYFARLSFGNDAQAIDVLVDTGSFDLLIPSDLCTACSHVSQRLNVASAGVDFVHCGDAMRCHGQCMPDVLNSF-GSTSQTIPPQLYCGPHGGICEAGSNLCLFDDNYADGSYASGVV-VTAPSVNFSGVTLKDVTFGAIASASDTFFEAPQGGGIMGMAYRGSAVSTRANARGNLDQPVTKKDVVGCDGETPCMVPLLDALIAQQEQGVGGQVRDIFAIYGHPTSPVMLLGESSLGIESQEYYEGELQYARM--EAPYGLYMVGVAGLGVVEAPGMDVPKGVAEAGSTFMLHQGNAGLAIIDTGATGLYFPCSAYLKLKTYLQTHYC-HVPFICG 399
+++PLE+R + AA + P SS +P + L + + Y+ +S N Q + V +DTGS + P C C +R+ +A+ + + C + C P NS G+ S+ + C P + C F Y DGS+A G + V ++ +G+++ FG I S + FE GI G+AY A + C+ P+ D ++ G RD+FA+ TS ++ G G E +GE ++ M A Y VGV + G D G+ E S AI+D+G T + SA+ L+ +LQ+ YC VP +CG
Sbjct: 43 IVLPLEKRPGTVERIYSAPRRHGELAALLRPAVSGVPGGSSQEDKLPVNPLAGGIVNVGEYYVAISVDN--QTVHVQIDTGSSAIAFPLSQCKNCLKGDRRVTLANPDLTRISCSN----ESICKPSTCNSLCGACSEA--SKACCAP------VDTKACGFRLIYGDGSFAIGALHVGRITLTQTGLSVYPAYFGGILLDSAS-FEHVDVDGIWGLAYPSLACN------------------------PSCVPPVFDTMVRT-----GVVPRDMFALCLTDTSGALVFG----GAAGPEMRKGEYRWVPMVNRAVRTYYEVGVESVRF----GTDESAGLPEIRS-----------AIVDSGTTLIVISTSAFGTLREHLQSRYCDQVPGLCG 373
BLAST of EWM29052.1 vs. NCBI_GenBank
Match: gi|1189381160|gb|OSX69083.1| (hypothetical protein BU14_1889s0001 [Porphyra umbilicalis]) HSP 1 Score: 71.633 bits (174), Expect = 2.567e-9 Identity = 93/349 (26.65%), Postives = 138/349 (39.54%), Query Frame = 0
Query: 61 LQAFVPGLPAYFARLSFGNDAQAIDVLVDTGSFDLLIPSDLCTACSHVSQRLNVASAGV---DFVHCGD----AMRCHGQCMPDVLNSFGSTSQTIPPQLYCGPHGGICE-AGSNLCLFDDNYADGSYASGVVVTAPSVNFSGVTLKDVTFGAIASASDTFFEAPQGGGIMGMAYRGSAVSTRANARGNLDQPVTKKDVVGCDGETPCMVPLLDALIAQQEQGVGGQVRDIFAIYGHPTSPVMLLGESSLGIESQEYYEGELQYAR--MEAPYGLYMVGVAG-LGVVEAPGMDVPKGVAEAGSTFMLHQGNAGLAIIDTGATGLYFPCSAYLKLKTYLQTHYCHVPFIC 398
L + G+ Y+ + G +A+ V VDTGS L +P C +C + + A + V + CGD A RC +C CG +G C C F YADGS ASG +V+ + + ++ + VTFG I S FE GI+GMAY+ A + C+ P D L+A G V D+F+I G+ LG + + +Q+A + P Y V + G L + +A DVP N AI+DTG T + + ++ +LQ+ YCHVP +C
Sbjct: 254 LHGGIVGVGEYYTIVRLGG--KAMRVQVDTGSATLAVPMKGCKSCINQKHGYSTAESPVADARALPCGDEACQASRCTARCK------------------TCGANGACCSTVRPKECGFFLRYADGSAASGSLVSD-ELRWGNLSTR-VTFGGILHNSPD-FERYDVDGILGMAYKSLACNPT------------------------CVDPPFDLLVAS------GDVADVFSICMTAHG-----GKLVLGGMDERLVQSPVQWAPLFLSEPARYYRVHLGGSLKIGDA---DVP-------------LPNFRHAIVDTGTTLIVTSKRTFDAIRLHLQSQYCHVPELC 528
BLAST of EWM29052.1 vs. NCBI_GenBank
Match: gi|545712166|ref|XP_005708388.1| (aspartyl protease [Galdieria sulphuraria] >gi|452824868|gb|EME31868.1| aspartyl protease [Galdieria sulphuraria]) HSP 1 Score: 70.4774 bits (171), Expect = 4.998e-9 Identity = 95/385 (24.68%), Postives = 157/385 (40.78%), Query Frame = 0
Query: 60 HLQAFVPGLPAYFARLSFGNDAQAIDVLVDTGSFDLLIPSDLCTACSHVSQRLNVASAGVDFVHCGDAM-------RCHGQCMPDVLNSFGSTSQTIPPQLYCGPHGGICEAGSNLCLFDDNYADGSYASGVVVTAPSVNFSGVTLKDVTFGAIASASDTFFEAPQGGGIMGMAYRGSAVSTRANARGNLDQPVTKKDVVGCDGETPCMVPLLDALIAQQEQGVGGQVRDIFAIYGHPTSPVMLLGESSLGIESQEYYEGELQYARME--APYGLYMVGVAGLGVVEAPGMDVPKGVAEAGSTFMLHQGNAGLAIIDTGATGLYFPCSAYLKLKTYLQTHYCHVPFICGPLPTPTPELSDSEAAAVKGKQQERDHSHRALRSRRH 435
+L+ + + Y+ +S G Q + VL+DTGS L + S S + R N G+ F + + +C L S S L G G C F+ Y DGS ASG++ +V+ SG+ K + GAI + + F + + GI+G+A+ A + C+ P D L++Q+ + DIF+I +S ++LG GI+ Y G + Y ME + Y+V GL V +L++ + +A +D+G T L F + Y L++Y Q+HYC VP +C + T S S V +QQ ++ +L+ + +
Sbjct: 133 NLEGGLITVGGYYTNISVG--GQDVYVLIDTGSSTLAVIS------SDIEGRTN----GIPFFNSSSSTMISCSSPQCQSNTCSSSLCQTNSCSSNQACCLNLGDKSG--------CFFNLQYGDGSGASGILF-EDNVSLSGMAAK-CSIGAIVNDTKGF-QVGEALGILGLAFSRLACNP------------------------TCITPFFDELVSQEN------ITDIFSISLSLSSGTLVLG----GID-HSLYSGPVNYVPMENRSSNTYYIVASNGLSV----------------DGTVLNETDGMMAAVDSGTTTLVFDEATYELLRSYFQSHYCSVPGLCPSAGSNTTWFS-SNFCVVLDEQQLQNLPSISLQLKNN 442 The following BLAST results are available for this feature:
BLAST of EWM29052.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 7
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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