EWM29090.1, cds1617 (CDS) Nannochloropsis gaditana

Overview
NameEWM29090.1
Unique Namecds1617
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:1084868..1085126 +
Alignment locationCM002457.1:1085302..1086569 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29090.1
ProductKinetochore protein Nuf2
Orig transcript idgnl|cribi|Naga_100024g13.4348.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:1084868..1085126 +
CM002457.1supercontigCM002457.1:1085302..1086569 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0007049cell cycle
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0000775chromosome, centromeric region
Vocabulary: INTERPRO
TermDefinition
IPR005549Kinetochore_Nuf2
Homology
BLAST of EWM29090.1 vs. NCBI_GenBank
Match: gi|585111609|gb|EWM29090.1| (Kinetochore protein Nuf2 [Nannochloropsis gaditana])

HSP 1 Score: 1020.38 bits (2637), Expect = 0.000e+0
Identity = 508/508 (100.00%), Postives = 508/508 (100.00%), Query Frame = 0
Query:    1 MSWNDSRQSLGPRASMGPRPSMGPRASLGGRQQSVQAFSFPILKTPDILQCMHELQVRLTEAEINEADKHRDAIRRAYEYLVEICTGITKEEMSQPAFSGINALNYPELHEESIPELAFFRACTKMMTVCGVHDFSMKDLLSPEPKRVRRHLSAIINFAKFREERLVMYSELAVKRDELLDNLKRLQDEEVGVAKELGVLREQAAAESEEMEGLEQACEVAEAELEQLNKRQAEIRAQGAELKKQSQDLKESIGKASSALESGIEEREKTRGQIVRSPERVRRELASAAEEVETEKKEGLATERDAREMHLRVQAVQKGEKEVGKAIKALEEIEGEMAKVKLASKELKDATKNVQGNRQRVLEAAQEMENLKRQASRFEDRWTHLRKSGKAKDEALEVAGKEAQAQLLAVEKVRRAHQQAADESEADVARVTAEVEGEKQENAARCAEMVEALKSLSETVAEHQQGLREALGDTTNAPLPSAASSTPILSRLSMVAAAARKEGSKPVL 508
            MSWNDSRQSLGPRASMGPRPSMGPRASLGGRQQSVQAFSFPILKTPDILQCMHELQVRLTEAEINEADKHRDAIRRAYEYLVEICTGITKEEMSQPAFSGINALNYPELHEESIPELAFFRACTKMMTVCGVHDFSMKDLLSPEPKRVRRHLSAIINFAKFREERLVMYSELAVKRDELLDNLKRLQDEEVGVAKELGVLREQAAAESEEMEGLEQACEVAEAELEQLNKRQAEIRAQGAELKKQSQDLKESIGKASSALESGIEEREKTRGQIVRSPERVRRELASAAEEVETEKKEGLATERDAREMHLRVQAVQKGEKEVGKAIKALEEIEGEMAKVKLASKELKDATKNVQGNRQRVLEAAQEMENLKRQASRFEDRWTHLRKSGKAKDEALEVAGKEAQAQLLAVEKVRRAHQQAADESEADVARVTAEVEGEKQENAARCAEMVEALKSLSETVAEHQQGLREALGDTTNAPLPSAASSTPILSRLSMVAAAARKEGSKPVL
Sbjct:    1 MSWNDSRQSLGPRASMGPRPSMGPRASLGGRQQSVQAFSFPILKTPDILQCMHELQVRLTEAEINEADKHRDAIRRAYEYLVEICTGITKEEMSQPAFSGINALNYPELHEESIPELAFFRACTKMMTVCGVHDFSMKDLLSPEPKRVRRHLSAIINFAKFREERLVMYSELAVKRDELLDNLKRLQDEEVGVAKELGVLREQAAAESEEMEGLEQACEVAEAELEQLNKRQAEIRAQGAELKKQSQDLKESIGKASSALESGIEEREKTRGQIVRSPERVRRELASAAEEVETEKKEGLATERDAREMHLRVQAVQKGEKEVGKAIKALEEIEGEMAKVKLASKELKDATKNVQGNRQRVLEAAQEMENLKRQASRFEDRWTHLRKSGKAKDEALEVAGKEAQAQLLAVEKVRRAHQQAADESEADVARVTAEVEGEKQENAARCAEMVEALKSLSETVAEHQQGLREALGDTTNAPLPSAASSTPILSRLSMVAAAARKEGSKPVL 508          
BLAST of EWM29090.1 vs. NCBI_GenBank
Match: gi|635361976|emb|CCI49178.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 251.521 bits (641), Expect = 2.888e-74
Identity = 155/466 (33.26%), Postives = 257/466 (55.15%), Query Frame = 0
Query:   16 MGPRPSMGPR--ASLGGRQQSVQAFSFPILKTPDILQCMHELQVRLTEAEINEADKHRDAIRRAYEYLVEICTGITKEEMSQPAFSGINALNYPELHEESIPELAFFRACTKMMTVCGVHDFSMKDLLSPEPKRVRRHLSAIINFAKFREERLVMYSELAVKRDELLDNLKRLQDEEVGVAKELGVLREQAAAESEEMEGLEQACEVAEAELEQLNKRQAEIRAQGAELKKQSQDLKESIGKASSALESGIEEREKTRGQIVRSPERVRRELASAAEEVETEKKEGLATERDAREMHLRVQAVQKGEKEVGKAIKALEEIEGEMAKVKLASKELKDATKNVQGNRQRVLEAAQEMENLKRQASRFEDRWTHLRKSG----KAKDEALEVAGKEAQAQLLAVEKVRRAHQQAADESEADVARVTAEVEGEKQENAAR----CAEMVEALKSLSETVAEHQQGLREAL 471
            M  R   GP   A++         +SFP+LK  +I   +  +Q+ + + +I + +     IRR +E  +E   GITKEEM QPAFSG+ AL++PELHEESIPEL FFR  +K+M  CG++DFS +DLL P PKR+RR LSA+INFAKFREERL  ++ L+ + +++L    R QDE + +  EL  L+++  AE   +E L Q C+  E E+  LN +QA +R +   L+ ++++L+  I    + +    EE ++   QIV SP+R++ E++  A  VE  ++E +  ++  RE+ L     Q+ EK++ K I+ L ++E  + K K A + + D    ++ N+Q+ +E   + + L++     +      ++      +A + ALE A +E Q       +V  A   A D    + ++   E+E + QE  A+      E+ E  + L+  V  + Q + +A+
Sbjct:    1 MQDRRLNGPTSTAAVTSNNAPFHVYSFPLLKASEIYSVLRNMQITVNDPDIRKYEP--PLIRRIFEVFIEKIMGITKEEMGQPAFSGLRALDFPELHEESIPELTFFRTISKLMGYCGIYDFSFRDLLYPSPKRLRRQLSALINFAKFREERLSTFAGLSKETEDILIMRSRQQDENIKLEAELNDLQQERVAEEPAIEQLTQECQAYEQEINTLNTKQATLRHETGLLRNKTKELRSEIATYDAQILDAQEEIKRLENQIVTSPDRIKVEISHIATTVEEAREEVMRHDKRQRELLLMRDTFQRTEKDMKKTIQGLLDLEILLNKCKQAKQNVHDLKSEMECNQQKAIEYLSQRKRLEKVLDAKQRDLVSYKEEASIMMQAAENALEAARQELQ-------QVENAQSNAHDRIATNHSK-RREIERQCQEKEAKYQRQVLEVKEMFQRLNNAVTYYNQAMIQAM 456          
BLAST of EWM29090.1 vs. NCBI_GenBank
Match: gi|325184034|emb|CCA18493.1| (kinetochore protein NUF2like protein putative [Albugo laibachii Nc14])

HSP 1 Score: 248.44 bits (633), Expect = 4.404e-73
Identity = 154/468 (32.91%), Postives = 263/468 (56.20%), Query Frame = 0
Query:   14 ASMGPRPSMGP--RASLGGRQQSVQAFSFPILKTPDILQCMHELQVRLTEAEINEADKHRDAIRRAYEYLVEICTGITKEEMSQPAFSGINALNYPELHEESIPELAFFRACTKMMTVCGVHDFSMKDLLSPEPKRVRRHLSAIINFAKFREERLVMYSELAVKRDELLDNLKRLQDEEVGVAKELGVLREQAAAESEEMEGLEQACEVAEAELEQLNKRQAEIRAQGAELKKQSQDLKESIGKASSALESGIEEREKTRGQIVRSPERVRRELASAAEEVETEKKEGLATERDAREMHLRVQAVQKGEKEVGKAIKALEEIEGEMAKVKLASKELKDATKNVQGNRQRVLEAAQEMENLKRQA-SRFEDRWTHLRKSG---KAKDEALEVAGKEAQAQLLAVEKVRRAHQQAADESEADVARVTAEVEGEKQENAAR----CAEMVEALKSLSETVAEHQQGLREAL 471
            A M  R   GP   A++      +  +SFP+LK  +I   +  + + + + +I + +     IR+ +E  +E   GI+KEEMSQPAFSG+ AL++PELHEESIPEL FFR  +K+M  CG++DF+ +DLL P PKR+RR LSA+INFAKFREERL  ++ L+ + +++L    + QDE + +  EL  L+++  AE+  +E L Q C+  E E+  LN +QA +R +   L+ +++DL+  I    + +    EE ++   QIV SP+R++ E++  A  VE  ++E +  ++  RE+       Q+ EK++ K I+ L ++E  + K K A + + D    ++ N+Q+ +E   + + L++   ++  D  ++  ++    +A + ALE A +E Q       +V  A   A D    + ++   E+E + QE  A+      E+ E  + LS  V  + Q + +A+
Sbjct:    2 APMQDRRVNGPSSTAAVTSNSAPLHVYSFPLLKASEIYSVLRNMHIPVNDPDIRKYEP--PLIRKIFEVFIETIMGISKEEMSQPAFSGLRALDFPELHEESIPELTFFRTISKLMGYCGIYDFNFRDLLHPSPKRLRRQLSALINFAKFREERLQTFAGLSKETEDILIMRSKQQDENIKLEAELKELQQEHVAEAPAIEQLRQECQEYEEEINTLNTKQATLRHETGLLRTRTKDLRNEIATYDAQILDAQEEIKRLENQIVTSPDRIKAEISHIASSVEEGREEVMRHDKRQRELLSMRDTFQRTEKDMKKTIQGLLDLETLLNKCKEAKQNVYDLKGEMESNQQKAIEYLSQRKRLEKVLEAKQRDLLSYKEEASIMMQAAESALEAARQELQ-------QVENAQSNAQDRIATNHSK-RREIERQCQEKEAKYQRHVLEVAEMFQRLSSAVTYYNQAMMQAM 459          
BLAST of EWM29090.1 vs. NCBI_GenBank
Match: gi|635361977|emb|CCI49179.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 233.802 bits (595), Expect = 5.403e-68
Identity = 142/406 (34.98%), Postives = 231/406 (56.90%), Query Frame = 0
Query:   74 IRRAYEYLVEICTGITKEEMSQPAFSGINALNYPELHEESIPELAFFRACTKMMTVCGVHDFSMKDLLSPEPKRVRRHLSAIINFAKFREERLVMYSELAVKRDELLDNLKRLQDEEVGVAKELGVLREQAAAESEEMEGLEQACEVAEAELEQLNKRQAEIRAQGAELKKQSQDLKESIGKASSALESGIEEREKTRGQIVRSPERVRRELASAAEEVETEKKEGLATERDAREMHLRVQAVQKGEKEVGKAIKALEEIEGEMAKVKLASKELKDATKNVQGNRQRVLEAAQEMENLKRQASRFEDRWTHLRKSG----KAKDEALEVAGKEAQAQLLAVEKVRRAHQQAADESEADVARVTAEVEGEKQENAAR----CAEMVEALKSLSETVAEHQQGLREAL 471
            IRR +E  +E   GITKEEM QPAFSG+ AL++PELHEESIPEL FFR  +K+M  CG++DFS +DLL P PKR+RR LSA+INFAKFREERL  ++ L+ + +++L    R QDE + +  EL  L+++  AE   +E L Q C+  E E+  LN +QA +R +   L+ ++++L+  I    + +    EE ++   QIV SP+R++ E++  A  VE  ++E +  ++  RE+ L     Q+ EK++ K I+ L ++E  + K K A + + D    ++ N+Q+ +E   + + L++     +      ++      +A + ALE A +E Q       +V  A   A D    + ++   E+E + QE  A+      E+ E  + L+  V  + Q + +A+
Sbjct:   18 IRRIFEVFIEKIMGITKEEMGQPAFSGLRALDFPELHEESIPELTFFRTISKLMGYCGIYDFSFRDLLYPSPKRLRRQLSALINFAKFREERLSTFAGLSKETEDILIMRSRQQDENIKLEAELNDLQQERVAEEPAIEQLTQECQAYEQEINTLNTKQATLRHETGLLRNKTKELRSEIATYDAQILDAQEEIKRLENQIVTSPDRIKVEISHIATTVEEAREEVMRHDKRQRELLLMRDTFQRTEKDMKKTIQGLLDLEILLNKCKQAKQNVHDLKSEMECNQQKAIEYLSQRKRLEKVLDAKQRDLVSYKEEASIMMQAAENALEAARQELQ-------QVENAQSNAHDRIATNHSK-RREIERQCQEKEAKYQRQVLEVKEMFQRLNNAVTYYNQAMIQAM 415          
BLAST of EWM29090.1 vs. NCBI_GenBank
Match: gi|635361975|emb|CCI49177.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 223.016 bits (567), Expect = 3.175e-64
Identity = 137/393 (34.86%), Postives = 224/393 (57.00%), Query Frame = 0
Query:   87 GITKEEMSQPAFSGINALNYPELHEESIPELAFFRACTKMMTVCGVHDFSMKDLLSPEPKRVRRHLSAIINFAKFREERLVMYSELAVKRDELLDNLKRLQDEEVGVAKELGVLREQAAAESEEMEGLEQACEVAEAELEQLNKRQAEIRAQGAELKKQSQDLKESIGKASSALESGIEEREKTRGQIVRSPERVRRELASAAEEVETEKKEGLATERDAREMHLRVQAVQKGEKEVGKAIKALEEIEGEMAKVKLASKELKDATKNVQGNRQRVLEAAQEMENLKRQASRFEDRWTHLRKSG----KAKDEALEVAGKEAQAQLLAVEKVRRAHQQAADESEADVARVTAEVEGEKQENAAR----CAEMVEALKSLSETVAEHQQGLREAL 471
            GITKEEM QPAFSG+ AL++PELHEESIPEL FFR  +K+M  CG++DFS +DLL P PKR+RR LSA+INFAKFREERL  ++ L+ + +++L    R QDE + +  EL  L+++  AE   +E L Q C+  E E+  LN +QA +R +   L+ ++++L+  I    + +    EE ++   QIV SP+R++ E++  A  VE  ++E +  ++  RE+ L     Q+ EK++ K I+ L ++E  + K K A + + D    ++ N+Q+ +E   + + L++     +      ++      +A + ALE A +E Q       +V  A   A D    + ++   E+E + QE  A+      E+ E  + L+  V  + Q + +A+
Sbjct:    2 GITKEEMGQPAFSGLRALDFPELHEESIPELTFFRTISKLMGYCGIYDFSFRDLLYPSPKRLRRQLSALINFAKFREERLSTFAGLSKETEDILIMRSRQQDENIKLEAELNDLQQERVAEEPAIEQLTQECQAYEQEINTLNTKQATLRHETGLLRNKTKELRSEIATYDAQILDAQEEIKRLENQIVTSPDRIKVEISHIATTVEEAREEVMRHDKRQRELLLMRDTFQRTEKDMKKTIQGLLDLEILLNKCKQAKQNVHDLKSEMECNQQKAIEYLSQRKRLEKVLDAKQRDLVSYKEEASIMMQAAENALEAARQELQ-------QVENAQSNAHDRIATNHSK-RREIERQCQEKEAKYQRQVLEVKEMFQRLNNAVTYYNQAMIQAM 386          
BLAST of EWM29090.1 vs. NCBI_GenBank
Match: gi|926775936|ref|XP_013896442.1| (Kinetochore protein nuf2, partial [Monoraphidium neglectum] >gi|761965399|gb|KIY97422.1| Kinetochore protein nuf2, partial [Monoraphidium neglectum])

HSP 1 Score: 214.157 bits (544), Expect = 3.525e-61
Identity = 124/359 (34.54%), Postives = 207/359 (57.66%), Query Frame = 0
Query:   35 VQAFSFPILKTPDILQCMHELQVRLTEAEINEADKHRDAIRRAYEYLVEICTGITKEEMSQPAFSGINALNYPELHEESIPELAFFRACTKMMTVCGVHDFSMKDLLSPEPKRVRRHLSAIINFAKFREERLVMYSELAVKRDELLDNLKRLQDEEVGVAKELGVLREQAAAESEEMEGLEQACEVAEAELEQLNKRQAEIRAQGAELKKQSQDLKESIGKASSALESGIEEREKTRGQIVR--------SPERVRRELASAAEEVETEKKEGLATERDAREMHLRVQAVQKGEKEVGKAIKALEEIEGEMAKVKLASKELKDATKNVQGNRQRVLEAAQEMENLKRQASRFEDRWTHL 385
            + ++SFP+L+  ++L C+ E+++ +T A++  A    + +   +E ++   TGIT+EE++QP F+ I+A  YPELH+ESI   +FF   +K++ VCGV DF MKDL  P+  R+RRHLSA+INFAKFREE+L+ Y+EL  + + L++  + LQ+E+     EL  +RE+ A E  +   ++   +    E +QLN++ A   ++   LK Q   L E++      L +G +E E+ R QIV+        SP++ +R L      V+ E+    A ++  R +  R   V K EK+V K ++ ++EIE E+A+ K AS+  KD  + +        +   + ++L RQ + F+DR   L
Sbjct:    1 MSSYSFPVLENDELLPCLEEMEIPITAAQL--AKPTHEVVAPIFENILVNLTGITREELNQPVFAAIDAFEYPELHDESIAARSFFSQLSKLLVVCGVKDFGMKDLHKPDALRLRRHLSAVINFAKFREEKLIAYAELQARLESLMEQRRGLQEEQAARESELRRMREERAGEEADASQIQAEADALRGENQQLNRQFAAASSEVKALKSQVAQLSEAVQAEKFELMNGQQEHERLREQIVQARAARGVFSPDKFKRSLVELQSAVDDERGHVDAADKRCRALQARDDTVGKVEKDVSKCLELMKEIENEVARKKEASRHAKDLREQIGAASNDAADMEAKQQHLLRQQATFKDRIRKL 357          
BLAST of EWM29090.1 vs. NCBI_GenBank
Match: gi|695464299|ref|XP_009538917.1| (hypothetical protein PHYSODRAFT_534042 [Phytophthora sojae] >gi|348665557|gb|EGZ05386.1| hypothetical protein PHYSODRAFT_534042 [Phytophthora sojae])

HSP 1 Score: 215.698 bits (548), Expect = 7.072e-61
Identity = 127/328 (38.72%), Postives = 192/328 (58.54%), Query Frame = 0
Query:   37 AFSFPILKTPDILQCMHELQVRLTEAEINEADKHRDAIRRAYEYLVEICTGITKEEMSQPAFSGINALNYPELHEESIPELAFFRACTKMMTVCGVHDFSMKDLLSPEPKRVRRHLSAIINFAKFREERLVMYSELAVKRDELLDNLKRLQDEEVGVAKELG-VLREQAAAESEEMEGLEQACEVAEAELEQLNKRQAEIRAQGAELKKQSQDLKESIGKASSALESGIEEREKTRGQIVRSPERVRRELASAAEEVETEKKEGLATERDAREMHLRVQAVQKGEKEVGKAIKALEEIEGEMAKVKLASKELKDATKNVQGNRQRVLE 363
             +SFP+LK  +I  C+ E++V ++E EI   D    A+R+  E  +E   G+T+E+M+Q AF G+  L++PELH ES+PEL F+R   +++  CGV DF ++D+L P PKRVRR LSA+INFAKFREERL  + E+  + DELL   K LQDE   + +EL  +L EQ   E   +E LE+     + E+++LNK+QAE+  + +E+K     + + +  A        EE E+ +G IV SP+RV+ EL + AE VE  K++    E     +   ++  ++ EKE+ +    L EIE EM       K  K+A   V+  + R+ E
Sbjct:   14 VYSFPLLKPREIFACLREMRVPVSEDEIRACDV--GAVRKVLEAFIESTMGVTREDMAQIAFPGLPTLSFPELHAESVPELTFYRTAQRLLAACGVDDFGLRDVLHPTPKRVRRQLSALINFAKFREERLAAFGEVTRETDELLLRKKALQDENAALQRELDQLLEEQKDEEPVRLE-LEKEVTELDREIDKLNKKQAEMHHETSEMKVARNKMLDDVASARFNKLQAEEEIERLKGLIVTSPDRVKGELKAIAENVEKAKEDLNELEDKQNSVLAFIEVYERAEKELARTFALLGEIEQEM-------KACKEAKHQVKTTKTRITE 331          
BLAST of EWM29090.1 vs. NCBI_GenBank
Match: gi|570972990|gb|ETP35742.1| (hypothetical protein F442_16145 [Phytophthora parasitica P10297])

HSP 1 Score: 214.927 bits (546), Expect = 1.699e-60
Identity = 133/392 (33.93%), Postives = 215/392 (54.85%), Query Frame = 0
Query:   37 AFSFPILKTPDILQCMHELQVRLTEAEINEADKHRDAIRRAYEYLVEICTGITKEEMSQPAFSGINALNYPELHEESIPELAFFRACTKMMTVCGVHDFSMKDLLSPEPKRVRRHLSAIINFAKFREERLVMYSELAVKRDELLDNLKRLQDEEVGVAKELGVLREQAAAESEEMEGLEQACEVAEAELEQLNKRQAEIRAQGAELKKQSQDLKESIGKASSALESGIEEREKTRGQIVRSPERVRRELASAAEEVETEKKEGLATERDAREMHLRVQAVQKGEKEVGKAIKALEEIEGEMAKVKLASKELKDATKNVQGNRQRVLEAAQEMENLKRQASRFEDRWTHLRKSGKAKDE----ALEVAGKEAQAQLLAVEKVRRAHQQAADES 424
            ++SFP+LK  +I  C+ +++V ++E EI   D    A+R+  E  +E   G+T+E+M+Q AF G+  L++PELH ES+P+L F+R   +++  CGV DF ++D+L P PKRVRR LSA+INF+KFR ERL  +SE+  + DELL   K LQ+E   + +EL  L E+  AE      L+      E E+  LN++QA +R +  E+K +  +++++I            + E+ + QIV SP+RV+ EL +    V+  K++ L  E     +   ++  ++ EKE+ +  K L EIE E+   K    +LK+A+  +   R R  E     E L++     +       +  +A DE    AL++A  E      A ++VR+   Q  D S
Sbjct:    8 SYSFPLLKPREIFACLRDMRVPVSEDEIRACDV--GAVRKVLEAFIENTMGVTREDMAQIAFPGLPTLSFPELHSESVPDLTFYRTAQRLLVACGVDDFGLRDVLHPTPKRVRRQLSALINFSKFRTERLAAFSEITSQTDELLAQKKALQEENAALQRELDQLLEEQKAEEPARLQLQTEVNELEKEINVLNRQQAVLRHETDEMKTRRSEMEDAISSTRFTKVEAENDIERLKAQIVTSPDRVKGELQTIGRTVDKAKEDLLELEEKHAAVIQFIEIYERAEKELARTFKLLGEIEQELKTCKETKDQLKNASTRLSELRIRTTETVTRRERLEKLVELKKRELNRYMEDARAADENANRALQMARNELNKLEAAHQEVRQRIMQNNDAS 397          
BLAST of EWM29090.1 vs. NCBI_GenBank
Match: gi|570318651|gb|ETO66599.1| (hypothetical protein F444_16284 [Phytophthora parasitica P1976])

HSP 1 Score: 214.542 bits (545), Expect = 1.948e-60
Identity = 133/392 (33.93%), Postives = 215/392 (54.85%), Query Frame = 0
Query:   37 AFSFPILKTPDILQCMHELQVRLTEAEINEADKHRDAIRRAYEYLVEICTGITKEEMSQPAFSGINALNYPELHEESIPELAFFRACTKMMTVCGVHDFSMKDLLSPEPKRVRRHLSAIINFAKFREERLVMYSELAVKRDELLDNLKRLQDEEVGVAKELGVLREQAAAESEEMEGLEQACEVAEAELEQLNKRQAEIRAQGAELKKQSQDLKESIGKASSALESGIEEREKTRGQIVRSPERVRRELASAAEEVETEKKEGLATERDAREMHLRVQAVQKGEKEVGKAIKALEEIEGEMAKVKLASKELKDATKNVQGNRQRVLEAAQEMENLKRQASRFEDRWTHLRKSGKAKDE----ALEVAGKEAQAQLLAVEKVRRAHQQAADES 424
            ++SFP+LK  +I  C+ +++V ++E EI   D    A+R+  E  +E   G+T+E+M+Q AF G+  L++PELH ES+P+L F+R   +++  CGV DF ++D+L P PKRVRR LSA+INF+KFR ERL  +SE+  + DELL   K LQ+E   + +EL  L E+  AE      L+      E E+  LN++QA +R +  E+K +  +++++I            + E+ + QIV SP+RV+ EL +    V+  K++ L  E     +   ++  ++ EKE+ +  K L EIE E+   K    +LK+A+  +   R R  E     E L++     +       +  +A DE    AL++A  E      A ++VR+   Q  D S
Sbjct:    8 SYSFPLLKPREIFACLRDMRVPVSEDEIRACDV--GAVRKVLEAFIENTIGVTREDMAQIAFPGLPTLSFPELHSESVPDLTFYRTAQRLLVACGVDDFGLRDVLHPTPKRVRRQLSALINFSKFRTERLAAFSEITSQTDELLAQKKALQEENAALQRELDQLLEEQKAEEPARLQLQTEVNELEKEINVLNRQQAVLRHETDEMKTRRSEMEDAISSTRFTKVEAENDIERLKAQIVTSPDRVKGELQTIGRTVDKAKEDLLELEEKHAAVIQFIEIYERAEKELARTFKLLGEIEQELKTCKETKDQLKNASTRLSELRIRTTETVTRRERLEKLVELKKRELNRYMEDARAADENANRALQMARNELSKLEAAHQEVRQRIMQNNDAS 397          
BLAST of EWM29090.1 vs. NCBI_GenBank
Match: gi|568010539|gb|ETL84727.1| (hypothetical protein L917_15540 [Phytophthora parasitica])

HSP 1 Score: 214.157 bits (544), Expect = 2.506e-60
Identity = 133/392 (33.93%), Postives = 215/392 (54.85%), Query Frame = 0
Query:   37 AFSFPILKTPDILQCMHELQVRLTEAEINEADKHRDAIRRAYEYLVEICTGITKEEMSQPAFSGINALNYPELHEESIPELAFFRACTKMMTVCGVHDFSMKDLLSPEPKRVRRHLSAIINFAKFREERLVMYSELAVKRDELLDNLKRLQDEEVGVAKELGVLREQAAAESEEMEGLEQACEVAEAELEQLNKRQAEIRAQGAELKKQSQDLKESIGKASSALESGIEEREKTRGQIVRSPERVRRELASAAEEVETEKKEGLATERDAREMHLRVQAVQKGEKEVGKAIKALEEIEGEMAKVKLASKELKDATKNVQGNRQRVLEAAQEMENLKRQASRFEDRWTHLRKSGKAKDE----ALEVAGKEAQAQLLAVEKVRRAHQQAADES 424
            ++SFP+LK  +I  C+ +++V ++E EI   D    A+R+  E  +E   G+T+E+M+Q AF G+  L++PELH ES+P+L F+R   +++  CGV DF ++D+L P PKRVRR LSA+INF+KFR ERL  +SE+  + DELL   K LQ+E   + +EL  L E+  AE      L+      E E+  LN++QA +R +  E+K +  +++++I            + E+ + QIV SP+RV+ EL +    V+  K++ L  E     +   ++  ++ EKE+ +  K L EIE E+   K    +LK+A+  +   R R  E     E L++     +       +  +A DE    AL++A  E      A ++VR+   Q  D S
Sbjct:    8 SYSFPLLKPREIFACLRDMRVPVSEDEIRACDV--GAVRKVLEAFIENTMGVTREDMAQIAFPGLPTLSFPELHSESVPDLTFYRTAQRLLVACGVDDFGLRDVLHPTPKRVRRQLSALINFSKFRTERLAAFSEITSQTDELLAQKKALQEENAALQRELDQLLEEQKAEEPARLQLQTEVNELEKEINVLNRQQAVLRHETDEMKTRRSEMEDAISSTRFTKVEAENDIERLKAQIVTSPDRVKGELQTIGRTVDKAKEDLLELEEKHAAVIQFIEIYERAEKELARTFKLLGEIEQELKTCKETKDQLKNASTRLSELRIRTTETVTRRERLEKLVELKKRELNRYMEDARAADEDANRALQMARNELSKLEAAHQEVRQRIMQNNDAS 397          
The following BLAST results are available for this feature:
BLAST of EWM29090.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111609|gb|EWM29090.1|0.000e+0100.00Kinetochore protein Nuf2 [Nannochloropsis gaditana... [more]
gi|635361976|emb|CCI49178.1|2.888e-7433.26unnamed protein product [Albugo candida][more]
gi|325184034|emb|CCA18493.1|4.404e-7332.91kinetochore protein NUF2like protein putative [Alb... [more]
gi|635361977|emb|CCI49179.1|5.403e-6834.98unnamed protein product [Albugo candida][more]
gi|635361975|emb|CCI49177.1|3.175e-6434.86unnamed protein product [Albugo candida][more]
gi|926775936|ref|XP_013896442.1|3.525e-6134.54Kinetochore protein nuf2, partial [Monoraphidium n... [more]
gi|695464299|ref|XP_009538917.1|7.072e-6138.72hypothetical protein PHYSODRAFT_534042 [Phytophtho... [more]
gi|570972990|gb|ETP35742.1|1.699e-6033.93hypothetical protein F442_16145 [Phytophthora para... [more]
gi|570318651|gb|ETO66599.1|1.948e-6033.93hypothetical protein F444_16284 [Phytophthora para... [more]
gi|568010539|gb|ETL84727.1|2.506e-6033.93hypothetical protein L917_15540 [Phytophthora para... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1621rna1621Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications