EWM29081.1, cds1615 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29081.1 vs. NCBI_GenBank
Match: gi|585111600|gb|EWM29081.1| (Protein of unknown function UPF0568 [Nannochloropsis gaditana]) HSP 1 Score: 629.017 bits (1621), Expect = 0.000e+0 Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 0
Query: 1 MTLSTGGRQRRSAFNTAAGMALSTRKPNEACIFRLLDALEYPALSTFSLDDPNQVCKAVWYIEDRKIRLYDIEDRKPLRTPGQEWSPALQKYLVDVQCPHSFEGKWNAVSETARVRVLHWLFVKALAFHYSDMSADAMKMDVAAGTAASIEANSSGTPMEVEAECAARGEHIPVDFDERVRALSSRLGLPTPSPSSPNHPTPDPSSLLKTLQGILSIIQLRLSPNAEVATKDGAVARLDIDDFPLSYTTHDPLVDRAARALTMLYVADLRELQTDINDILVSAQEFTANPYVACLEGGRGGAWG 304
MTLSTGGRQRRSAFNTAAGMALSTRKPNEACIFRLLDALEYPALSTFSLDDPNQVCKAVWYIEDRKIRLYDIEDRKPLRTPGQEWSPALQKYLVDVQCPHSFEGKWNAVSETARVRVLHWLFVKALAFHYSDMSADAMKMDVAAGTAASIEANSSGTPMEVEAECAARGEHIPVDFDERVRALSSRLGLPTPSPSSPNHPTPDPSSLLKTLQGILSIIQLRLSPNAEVATKDGAVARLDIDDFPLSYTTHDPLVDRAARALTMLYVADLRELQTDINDILVSAQEFTANPYVACLEGGRGGAWG
Sbjct: 1 MTLSTGGRQRRSAFNTAAGMALSTRKPNEACIFRLLDALEYPALSTFSLDDPNQVCKAVWYIEDRKIRLYDIEDRKPLRTPGQEWSPALQKYLVDVQCPHSFEGKWNAVSETARVRVLHWLFVKALAFHYSDMSADAMKMDVAAGTAASIEANSSGTPMEVEAECAARGEHIPVDFDERVRALSSRLGLPTPSPSSPNHPTPDPSSLLKTLQGILSIIQLRLSPNAEVATKDGAVARLDIDDFPLSYTTHDPLVDRAARALTMLYVADLRELQTDINDILVSAQEFTANPYVACLEGGRGGAWG 304
BLAST of EWM29081.1 vs. NCBI_GenBank
Match: gi|470322345|ref|XP_004349212.1| (homeobox prox 1 [Capsaspora owczarzaki ATCC 30864] >gi|765550687|gb|KJE91308.1| homeobox prox 1 [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 115.161 bits (287), Expect = 9.593e-27 Identity = 88/281 (31.32%), Postives = 141/281 (50.18%), Query Frame = 0
Query: 34 RLLDALEYPALSTFSLDDPNQVCKAVWYIEDRKIRLYDIEDRKPLR-TPGQEWSPALQKYLVDVQCPHSFEGKWNAVSETARVRVLHWLFVKALAFHYSDMSADAMKMDVAAGTAASIEANSSGTPMEVEAECAARGEHIPVDF--DERVR----ALSSRLGLPTPSPSSPNHPTPDPSSLLKTLQGILSIIQLRLSPNAEVATKDGAVAR-------LDIDDFPLSYTTHDPLVDRAARALTMLYVADLRELQTDINDILVSAQEFTANPYVACLEGGRG 300
R L AL+Y F++DD ++V + + ++ED +IRLY +EDR LR W A QKYL D+ CP G+ A + T ++ WL A+ Y+D + K +AA+ A+ S A + H+P D VR +++ L LP PT +P L+ L+ + ++++ RLSP A + AR +D+ PL ++T+D L+D AA+ L +L++ +LR+LQT +N+++VS Q TA+P G G
Sbjct: 6 RKLQALDYVRAPAFNVDDEHEVRQLIAWLEDTRIRLYKLEDRALLRDVKSDTWPAAGQKYLDDIGCP----GETRASNPT----MVDWLLNHAVNLEYADQHETSDK-----ASAATAGADGSSAMDTTPDAPALQAYHVPASLLMDTAVRKVLNGIAAALQLP---------PTDNP---LELLRAVSALVEDRLSPAAVAEAQSPPEARAATILDSIDLKHVPLGFSTNDALLDEAAKILRLLHIGELRKLQTSVNELIVSVQGLTADPKTDSSLGAVG 261
BLAST of EWM29081.1 vs. NCBI_GenBank
Match: gi|459178128|ref|XP_004226325.1| (PREDICTED: UPF0568 protein C14orf166 homolog [Ciona intestinalis]) HSP 1 Score: 107.842 bits (268), Expect = 3.508e-24 Identity = 92/273 (33.70%), Postives = 138/273 (50.55%), Query Frame = 0
Query: 34 RLLDALEYPALSTFSLDDPNQV--CKA-VWYIEDRKIRLYDIEDRKPLRTPG-QEWSPALQKYLVDVQCPHSFEGKWNAVSETARVRVLHWLFVKALAFHYSDMSADAMKMDVAAGTAASIEANSSGTPMEVEA--ECAARGEHIPVDFDER-------VRALSSRLGLPTPSPSSPNHPTPDPSSLLKTLQGILSIIQLRLS-PNAEVA-TKDGAVAR-LDIDDFPLSYTTHDPLVDRAARALTMLYVADLRELQTDINDILVSAQEFTANP 290
R L+AL YP STF DP+ V CK V ++ED+KIR Y +E+R L+T + W AL+KYL DV P + + + V+ WL A+ Y D +E +S +P +VE E A + D +E+ VR+L+ L +P PD + TL+ + +I+ RLS P E A T V R + IDD L + T DP++++AA+AL +L++ +LR+LQT +N+ +V+ Q TANP
Sbjct: 4 RKLNALGYPKSSTF---DPSVVEQCKELVIWLEDQKIRHYKVENRVFLKTANAKSWPAALEKYLKDVDYPFT---------KKNQNMVIDWLLGLAVRLEYGD----------------DVEKYNSVSPEKVEKPKENGASAKSPLQDINEKSMEFRTGVRSLAKVLDIPI---------HPDDTV---TLEAVKILIEERLSTPALEAAKTTSKPVGRAVPIDDIKLGFDTGDPMINKAAKALRLLHINELRKLQTQVNEAIVAVQAITANP 236
BLAST of EWM29081.1 vs. NCBI_GenBank
Match: gi|646700395|gb|KDR10556.1| (hypothetical protein L798_15265 [Zootermopsis nevadensis]) HSP 1 Score: 107.071 bits (266), Expect = 6.345e-24 Identity = 86/273 (31.50%), Postives = 126/273 (46.15%), Query Frame = 0
Query: 34 RLLDALEYPALSTFSLDDPNQVCKAVWYIEDRKIRLYDIEDRKPLRTPG-QEWSPALQKYLVDVQCPHSFEGKWNAVSETARVRVLHWLFVKALAFHYSDMSADAMKMDVAAGTAASIEANSSGTPMEVEAECAARGEHIPVDFDERVRALSSRLGLPTPSPSSPNHPTPDPSSLLKTLQGILSIIQLRLSPNA-----EVATKDGAVARLDIDDFPLSYTTHDPLVDRAARALTMLYVADLRELQTDINDILVSAQEFTANPYVACLEGGRG 300
R L AL YP+ F+++D + V ++ED+KIR Y IEDRK LR +W +KY D+ CP + ++ WL A+ YSD SAD K TA ++ N TP V A + DF + V L+ L + S P+H L TL+ + ++ RLS A V K + D L + T D ++++AA+ L +LY+ +LR+LQT IN+ +V+ Q TANP G G
Sbjct: 4 RKLTALNYPSPDNFNVNDTTEFRNLVLWLEDQKIRHYKIEDRKALRDINCHDWPKTFRKYGDDLACP---------IQSEKPSELIEWLLAFAVRLEYSD-SADMYK----NQTADHVKKNELNTPKVVSANPLDNLDFQSADFKKGVNTLAQLLQIT----SHPDH--------LITLKAVSKVVCQRLSAEALENPSSVIVKGKPFPFQEAD---LGFDTGDYVLNQAAKILRLLYIQNLRDLQTRINECIVAVQSVTANPKTDTKLGKVG 247
BLAST of EWM29081.1 vs. NCBI_GenBank
Match: gi|675384275|gb|KFM77172.1| (hypothetical protein X975_23193, partial [Stegodyphus mimosarum]) HSP 1 Score: 105.531 bits (262), Expect = 1.945e-23 Identity = 81/258 (31.40%), Postives = 123/258 (47.67%), Query Frame = 0
Query: 34 RLLDALEYPALSTFSLDDPNQVCKAVWYIEDRKIRLYDIEDRKPLRTPGQ-EWSPALQKYLVDVQCPHSFEGKWNAVSETARVRVLHWLFVKALAFHYSDMSADAMKMDVAAGTAASIEANSSGTPMEVEAECAARGEHIPVDFDERVRALSSRLGLPTPSPSSPNHPTPDPSSLLKTLQGILSIIQLRLSPNAEVATKDGAVARLDIDDFPLSYTTHDPLVDRAARALTMLYVADLRELQTDINDILVSAQEFTANP 290
R L+AL Y + F++ V ++ED+ IR Y IE+R PLR +W A + YL V CP T R V WL A+ Y D + + K + TA S+ SS P + +F V++L+ LG+ SP P+H L+TL + ++IQ + E TK + + PL + T DP++D+AA+ L + ++ DLR+LQT IN+I+V+ Q+ TANP
Sbjct: 5 RKLEALGYIKIDDFNVFSDTDFRTLVVWLEDQVIRQYPIENRAPLRVISSPDWEDAFKTYLEAVACPF-----------TDREEVADWLLGYAVRLEYGD-NVEQYK----SVTAESLNQMSSNVPQVKAKNPLDNMDFESTEFKGHVKSLAQLLGV---SPH-PDH--------LETLSAVCTVIQNSFTEALENKTKKKDGKPSPVMELPLGFDTGDPVLDKAAKILRLCFIHDLRDLQTKINEIIVAVQKVTANP 234
BLAST of EWM29081.1 vs. NCBI_GenBank
Match: gi|817219488|ref|XP_012285473.1| (PREDICTED: UPF0568 protein C14orf166 [Orussus abietinus]) HSP 1 Score: 105.531 bits (262), Expect = 2.470e-23 Identity = 82/271 (30.26%), Postives = 120/271 (44.28%), Query Frame = 0
Query: 34 RLLDALEYPALSTFSLDDPNQVCKAVWYIEDRKIRLYDIEDRKPLRT-PGQEWSPALQKYLVDVQCPHSFEGKWNAVSETARVRVLHWLFVKALAFHYSDMSADAMKMDVAAGTAASIEANSSGTPMEVEAECAARGEHIPVDFDERVRALSSRLGLPTPSPSSPNHPTPDPSSLLKTLQGILSIIQLRLSPNAEVATKDGAVAR---LDIDDFPLSYTTHDPLVDRAARALTMLYVADLRELQTDINDILVSAQEFTANPYVACLEGGRG 300
R L AL+Y + +DP K V ++ED+KIR Y IEDR+ LR ++W Q Y +V CP ++ + L WL A+ Y D ++ T ++ S+ P DF V A++ L +P PNH L TL+ ++ RL+PNA + + V + I D L + DP+++ AA+ L +LY+ DLRELQT IN+ +VS Q TANP G G
Sbjct: 4 RKLKALDYMDWDKVNGNDPEHFRKLVVWLEDQKIRNYKIEDRECLRNIQSEDWIKVFQDYCNNVACPIV----------SSPLDQLEWLIGLAIRLEYEDDHKKYQEV-----TIEKVKEKSTVVPSVKSTNPLDNLNFYSEDFKSGVNAIAKILKVP----QHPNH--------LITLEACSKVVCKRLNPNA-IQNPNTVVIKGTPFPIGDVDLGFNMGDPVLNNAAKVLRLLYIHDLRELQTKINEAIVSVQNITANPKTDTKLGKVG 246
BLAST of EWM29081.1 vs. NCBI_GenBank
Match: gi|1005949455|ref|XP_015783050.1| (PREDICTED: UPF0568 protein C14orf166 homolog [Tetranychus urticae]) HSP 1 Score: 104.375 bits (259), Expect = 8.406e-23 Identity = 78/272 (28.68%), Postives = 121/272 (44.49%), Query Frame = 0
Query: 34 RLLDALEYPALSTFSLDDPNQVCKAVWYIEDRKIRLYDIEDRKPLRTPGQ-EWSPALQKYLVDVQCPHSFEGKWNAVSETARVRVLHWLFVKALAFHYSDMSADAMKMDVAAGTAASIEANSSGTPMEVEAECAARGEHIPVDFDERVRALSSRLGLPTPSPSSPNHPTPDPSSLLKTLQGILSIIQLRLSPNAEVATKD----GAVARLDIDDFPLSYTTHDPLVDRAARALTMLYVADLRELQTDINDILVSAQEFTANPYVACLEGGRG 300
R L A+E+ F+++D N V ++ED+KIR Y IE+R LR +W A +KYL ++CP + R VL WL A+ Y+D D + N + P V+A + +F + L+ L +P P+H L TL+ I +I+ RL+ +A + K+ +++ L + D + RAA+ L +LY+ DLR+LQ IN ++VS Q TANP G G
Sbjct: 4 RKLKAIEFGKADNFNVEDENSFRNLVAWLEDQKIRHYPIEERSGLRKISSPDWENAFKKYLESLKCPFDVKD---------RKLVLDWLISTAVRLDYND------NFDKYKDVTGKLVKNQASNPQMVQANPLDNLDFNAKEFKHGIGELAKLLKVP----QHPDH--------LITLKAINHLIKTRLTADALQSEKEELETSGEKSFTLENSILGFDVKDQNLSRAAKVLRILYINDLRDLQNKINQVIVSIQAITANPKTDTSLGQVG 248
BLAST of EWM29081.1 vs. NCBI_GenBank
Match: gi|156551153|ref|XP_001604251.1| (PREDICTED: UPF0568 protein C14orf166 homolog [Nasonia vitripennis]) HSP 1 Score: 103.605 bits (257), Expect = 1.338e-22 Identity = 81/261 (31.03%), Postives = 122/261 (46.74%), Query Frame = 0
Query: 34 RLLDALEYPALSTFSLDDPNQVCKAVWYIEDRKIRLYDIEDRKPLRT-PGQEWSPALQKYLVDVQCPHSFEGKWNAVSETARVRVLHWLFVKALAFHYSDMSADAMKMDVAAGTAASIEANSSGTPMEVEAECAARGEHIPVDFDERVRALSSRLGLPTPSPSSPNHPTPDPSSLLKTLQGILSIIQLRLSPNAEVATKDGAVAR---LDIDDFPLSYTTHDPLVDRAARALTMLYVADLRELQTDINDILVSAQEFTANP 290
R L AL+Y F+ +D V K V ++ED+KIR Y IEDRK L+ +W +KYL DV C + A + + WL A+ + D A T+++ ++ P + + DF + V AL+ L +P PNH L TL+ +I RL+PNA V + + R I + + Y D +++AA+ L++LY+ DLR+LQT IN+ +VS Q TANP
Sbjct: 4 RKLKALDYFDCDKFNGNDLQHVKKLVPWLEDQKIRQYKIEDRKDLQNINSDQWPATFEKYLEDVGC----------LPFQALLDKVEWLIGLAIRLEFEDNCEK-----YRAITSSNAKSKHESAPSIKSSNPLDNLDFQSNDFKDGVNALAKLLNIP----QHPNH--------LITLEACSKLICKRLNPNA-VQNPNSVIVRGKPFPIMETEVGYNMGDAALNKAAKVLSLLYIQDLRDLQTKINEAIVSVQSITANP 236
BLAST of EWM29081.1 vs. NCBI_GenBank
Match: gi|957818856|ref|XP_014671871.1| (PREDICTED: UPF0568 protein C14orf166 homolog isoform X1 [Priapulus caudatus]) HSP 1 Score: 103.219 bits (256), Expect = 2.179e-22 Identity = 82/262 (31.30%), Postives = 120/262 (45.80%), Query Frame = 0
Query: 34 RLLDALEYPALSTFSLDDPNQVCKAVWYIEDRKIRLYDIEDRKPLRT-PGQEWSPALQKYLVDVQCPHSFEGKWNAVSETARVRVLHWLFVKALAFHYSDMSADAMKMDVAAGTAASIEANSSGTPMEVEAECAARGEHIPVDFDERVRALSSRLGLPTPSPSSPNHPTPDPSSLLKTLQGILSIIQLRLSPNAEVATKDG----AVARLDIDDFPLSYTTHDPLVDRAARALTMLYVADLRELQTDINDILVSAQEFTANP 290
R L AL+Y +F D + V ++ED KIR Y IEDR LR +W +YL D++CP V ++ +L WL A+ Y D + + TAAS+ A P + DF V +L+ L +P P+H L TL+ + +I RLSP+A A K V L + + L + T D ++ AA+ L +L++ +LRELQT IN+ +V+AQ TANP
Sbjct: 4 RKLKALKYQLADSFEFDVESNFKNVVVWLEDHKIRHYKIEDRDALRKLQNPDWQEVFTQYLKDLECP---------VIDSDATTILDWLLGLAVGLEYGDHAEKYKSI-----TAASLAAKKLDQPQMQSDNPLDKLNFDDPDFKAGVTSLAQLLQIP----RHPDH--------LVTLKAVTKLISERLSPDALEAAKSNIPSETVKPLPLANCVLGFETGDYVMSEAAKILRLLHIRELRELQTRINEAIVAAQAITANP 239
BLAST of EWM29081.1 vs. NCBI_GenBank
Match: gi|1207935180|ref|XP_021357027.1| (UPF0568 protein C14orf166 homolog [Mizuhopecten yessoensis]) HSP 1 Score: 102.834 bits (255), Expect = 2.198e-22 Identity = 79/264 (29.92%), Postives = 125/264 (47.35%), Query Frame = 0
Query: 34 RLLDALEYPALSTFSLDDPNQVCKAVWYIEDRKIRLYDIEDRKPLRT-PGQEWSPALQKYLVDVQCPHSFEGKWNAVSETARVRVLHWLFVKALAFHYSDMSADAMKMDVAAGTAASIEANSSGTPMEVEAECAARGEHIP----VDF-DERVRALSSRLGLPTPSPSSPNHPTPDPSSLLKTLQGILSIIQLRLSPNA-EVATKDGAVARLDIDDFPLSYTTHDPLVDRAARALTMLYVADLRELQTDINDILVSAQEFTANP 290
R L ALEY +F D+ N+ + ++ED+KIR Y IEDR LR G +WS ALQ YL ++ C + + R ++ WL A+ Y + S++ S TP V++ AA + +DF D +A + L + P +H L+ L+ I +++ RLS A + AT ++ +D L + T D +++ AA+ + +L++ DLR+LQT IN +V Q TANP
Sbjct: 4 RKLCALEYQQADSFDHDNENEFRNLIVWLEDQKIRHYKIEDRTGLRNMNGADWSKALQSYLEELGCSYQ---------QAERTILIDWLLGYAIRLDYGE----------------SVDQYKSVTPDTVKSSAAAPAKSTNPLDNLDFNDADFKAGVASLSMILKVPPHADH--------LEQLKAICLLVKNRLSKEALQKATSQPKGVQVPLDKTELGFETGDYIINEAAKIVRLLHIKDLRDLQTQINAAIVGVQSITANP 234 The following BLAST results are available for this feature:
BLAST of EWM29081.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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