EWM29073.1, cds1612 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29073.1 vs. NCBI_GenBank
Match: gi|585111592|gb|EWM29073.1| (dehydroascorbate reductase [Nannochloropsis gaditana]) HSP 1 Score: 655.21 bits (1689), Expect = 0.000e+0 Identity = 316/316 (100.00%), Postives = 316/316 (100.00%), Query Frame = 0
Query: 1 MIMRSLVQVSSISLLLLVVRTKAFLRPILPRYSSTLRASSVAVRYITLADATPQSITSRIEGSHTRSSMSSSIALASARSTTGFGDARGRGARDEQGRIELLCKAGPDGAALGDCPFCHYVQMVLRYKGLRYRLIPLTPEDKPEWLVEGYGGKMPCLVHDEEAYTDSGTITQYLEYFFPGEEPLTVEDENPELAEEVKTATSGVFGAFARYMKNMDKEQDPPLQAALVEELNKVDTLLQKTKGPFLAGERITLDDMALAPKLYHIKVGVAHFKNVIIPPSLTALAAYMQHIFDMDIFQESSYPPDVITWGWGNARK 316
MIMRSLVQVSSISLLLLVVRTKAFLRPILPRYSSTLRASSVAVRYITLADATPQSITSRIEGSHTRSSMSSSIALASARSTTGFGDARGRGARDEQGRIELLCKAGPDGAALGDCPFCHYVQMVLRYKGLRYRLIPLTPEDKPEWLVEGYGGKMPCLVHDEEAYTDSGTITQYLEYFFPGEEPLTVEDENPELAEEVKTATSGVFGAFARYMKNMDKEQDPPLQAALVEELNKVDTLLQKTKGPFLAGERITLDDMALAPKLYHIKVGVAHFKNVIIPPSLTALAAYMQHIFDMDIFQESSYPPDVITWGWGNARK
Sbjct: 1 MIMRSLVQVSSISLLLLVVRTKAFLRPILPRYSSTLRASSVAVRYITLADATPQSITSRIEGSHTRSSMSSSIALASARSTTGFGDARGRGARDEQGRIELLCKAGPDGAALGDCPFCHYVQMVLRYKGLRYRLIPLTPEDKPEWLVEGYGGKMPCLVHDEEAYTDSGTITQYLEYFFPGEEPLTVEDENPELAEEVKTATSGVFGAFARYMKNMDKEQDPPLQAALVEELNKVDTLLQKTKGPFLAGERITLDDMALAPKLYHIKVGVAHFKNVIIPPSLTALAAYMQHIFDMDIFQESSYPPDVITWGWGNARK 316
BLAST of EWM29073.1 vs. NCBI_GenBank
Match: gi|299116565|emb|CBN74753.1| (GSH-dependent dehydroascorbate reductase, monomeric enzymes catalyzing the reduction of DHA into asc [Ectocarpus siliculosus]) HSP 1 Score: 257.684 bits (657), Expect = 5.154e-81 Identity = 139/329 (42.25%), Postives = 189/329 (57.45%), Query Frame = 0
Query: 13 SLLLLVVRTKAFLRPILPR-----YSSTLRASSVAVRYITLA--------------------DATPQSITSRIE-GSHTRSSMSSSIALASARSTTGFGDARGRGARDEQGRIELLCKAGPDGAALGDCPFCHYVQMVLRYKGLRYRLIPLTPEDKPEWLVEGYGGKMPCLVHDEEAYTDSGTITQYLEYFFPGEEPLTVEDENPELAEEVKTATSGVFGAFARYMKNMDKEQDPPLQAALVEELNKVDTLLQKTKGPFLAGERITLDDMALAPKLYHIKVGVAHFKNVIIPPSLTALAAYMQHIFDMDIFQESSYPPDVITWGWGNAR 315
S L L+ + F+ PI+ R ++T RASSV R + D+ P SIT ++ G + + A++ G + +EL CKA DG ALGDCPF HYV MVL+YKGL ++L P+ P+ KP+WLVE Y G+MPCLV +EAYT+S I Y+EYF+P E L+++D + + K TSGVFG+ A+ +KN++ ++DP L A + EL KVD L+K KGP+L GE +TL D + APKLYH +AHFKN +I P L +L YM I+ + F +SSYPPDVI WGW NAR
Sbjct: 9 SCLALLAPARGFVSPIVTRTPGAQIAATSRASSVRHRAVARRGDLSMRKTGKFVLSKKALNDDSGPTSITVNMKSGEMIKEEKKEAPKEEMAKAGPGL----------LEPDMELFCKAAADGNALGDCPFTHYVHMVLQYKGLPFKLTPVAPDAKPDWLVEDYEGQMPCLVDSKEAYTESANIVDYVEYFYP-EPTLSIKDS--DAVAKAKEVTSGVFGSLAKCIKNLNPKEDPMLIADAMAELKKVDAFLKKGKGPYLCGEELTLADCSFAPKLYHASTCLAHFKNTVISPDLESLHKYMDAIYSHEAFTKSSYPPDVIVWGWNNAR 324
BLAST of EWM29073.1 vs. NCBI_GenBank
Match: gi|1210531456|dbj|GAX09812.1| (hypothetical protein FisN_11Lh214 [Fistulifera solaris]) HSP 1 Score: 174.096 bits (440), Expect = 1.078e-49 Identity = 89/220 (40.45%), Postives = 125/220 (56.82%), Query Frame = 0
Query: 99 IELLCKAGPDGAALGDCPFCHYVQMVLRYKGLRYRLIPLTPEDKPEWLVEGYGGKMPCLVHDEEAYTDSGTITQYLEYFFPGEEPLTVEDENPELAEEVKTATSGVFGAFARYMKNM--DKEQDPPLQAALVEELNKVDTLLQKTKGPFLAGERITLDDMALAPKLYHIKVGVAHFKNVIIPPSLTALAAYMQHIFDMDIFQESSYPPDVITWGWGNARK 316
+ L CKAGPDG +GDCPFCH +++VL L Y+LIP TPE KP WL++ + GKMP L H YT+S I YL L + A + A +G+F A A+Y+K+ + E+D L++ L L ++D L T F GE T D +AP+LYH++ GVA F+ I L+ YM+++FD + FQ + YP + + WGW NARK
Sbjct: 18 MTLYCKAGPDGKTIGDCPFCHAIRLVLEELHLAYQLIPATPETKPSWLLDHFEGKMPALRHGNSCYTESSVIIDYL---------LGLSHNQLSQANSNEAANAGLFPAIAKYLKHRPDNDEEDRTLRSKLKTILQRMDANLAGTS--FWNGESFTETDCKIAPQLYHLQCGVAAFQKDIDLEEYANLSGYMKNLFDRESFQSTVYPAETVVWGWSNARK 226
BLAST of EWM29073.1 vs. NCBI_GenBank
Match: gi|1210525011|dbj|GAX16203.1| (chloride intracellular channel protein 2 [Fistulifera solaris]) HSP 1 Score: 169.088 bits (427), Expect = 3.083e-47 Identity = 90/233 (38.63%), Postives = 129/233 (55.36%), Query Frame = 0
Query: 86 DARGRGARDEQGRIELLCKAGPDGAALGDCPFCHYVQMVLRYKGLRYRLIPLTPEDKPEWLVEGYGGKMPCLVHDEEAYTDSGTITQYLEYFFPGEEPLTVEDENPELAEEVKTATSGVFGAFARYMKNM--DKEQDPPLQAALVEELNKVDTLLQKTKGPFLAGERITLDDMALAPKLYHIKVGVAHFKNVIIPPSLTALAAYMQHIFDMDIFQESSYPPDVITWGWGNARK 316
+ R GA +G + L CKAGPDG A+GDCPFCH+V++VL L Y ++P T E KP+WLV+ Y GKMP L H +E YT+S I YL +FF + L+ + E+ G+F A A+Y+K+ + + D L+ L L ++D L + F G+ T D LAP+LYH++ G+ F I L+ YM ++F FQ + YP + + WGW NAR
Sbjct: 42 EVRQEGATPTEGGMILYCKAGPDGQAIGDCPFCHFVRIVLEELNLEYEVLPTTSETKPKWLVDHYEGKMPALRHRKECYTESSVIVDYLLFFFGKNKELSQISSSNEI-------VGGLFPAVAKYLKHTPDNDDTDLELRDNLKITLQQLDDHLVGKQ--FWNGDVFTQVDCKLAPQLYHLQCGIDAFHKQIDLAEYVHLSQYMTNLFARPSFQATVYPKEAVEWGWSNARN 265
BLAST of EWM29073.1 vs. NCBI_GenBank
Match: gi|219120379|ref|XP_002180929.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407645|gb|EEC47581.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 167.162 bits (422), Expect = 1.419e-46 Identity = 94/258 (36.43%), Postives = 148/258 (57.36%), Query Frame = 0
Query: 67 SSMSSSIALASARSTTGFGDARGRGARDEQGRIELLCKAGPDGAALGDCPFCHYVQMVLRYKGLRYRLIPLTPEDKPEWLVEGYGGKMPCLVHDEEAYTDSGTITQYLEYFFPGEEPLTVEDENPELAEEVKTATSGVFGAFARYMKNM--DKEQDPPLQAALVEELNKVDTLLQ--KTKGPFLA--GERITLDDMALAPKLYHIKVGVAHFKN--VIIPPSLTALAAYMQHIFDMDIFQESSYPPDVITWGWGNARK 316
S S++ + R + R GA +G + L KA DG +GDCPF H+V++VL KGL+Y L P T + KP WL E Y GK+P L H +E Y +S I YL++FFP +P +++ E+ +E + A SG F + A+Y+K++ ++D ++ +L L +++ LQ GP+L GE++TL D +L+PKLYH++ G+ FK+ + + A+ Y+ + + FQ++ Y DVI WGW N RK
Sbjct: 15 QSTKSALCMVQNRGL----EIRREGATPTEGGMTLYLKAAADGTLVGDCPFAHFVRLVLEEKGLQYELKPCTEDTKPAWLTEYYEGKLPALRHRKECYVESDVIADYLDFFFP--DP-SLKGGKKEM-DEAEDAISGFFPSVAKYLKHIPDGDDEDQEMKCSLESVLLRLEEHLQLENRTGPYLVGNGEKLTLLDCSLSPKLYHLRTGIEAFKDNAIDLAQKFPAVNEYLDSMLKRESFQKTVYDKDVIIWGWSNTRK 264
BLAST of EWM29073.1 vs. NCBI_GenBank
Match: gi|1210531023|dbj|GAX10124.1| (hypothetical protein FisN_3Lh316 [Fistulifera solaris]) HSP 1 Score: 167.162 bits (422), Expect = 1.516e-46 Identity = 89/233 (38.20%), Postives = 127/233 (54.51%), Query Frame = 0
Query: 86 DARGRGARDEQGRIELLCKAGPDGAALGDCPFCHYVQMVLRYKGLRYRLIPLTPEDKPEWLVEGYGGKMPCLVHDEEAYTDSGTITQYLEYFFPGEEPLTVEDENPELAEEVKTATSGVFGAFARYMKNM--DKEQDPPLQAALVEELNKVDTLLQKTKGPFLAGERITLDDMALAPKLYHIKVGVAHFKNVIIPPSLTALAAYMQHIFDMDIFQESSYPPDVITWGWGNARK 316
+ R GA +G + L CKAGPDG A+GDCPFCH+V++VL L Y ++P T E KP+WLV+ Y GKMP L H +E YT+S I YL +FF + ++ N G+F A A+Y+K+ + + D L+ L L ++D L + F G+ T D LAP+LYH++ G+ F+ I L YM ++F FQ + YP + + WGW NAR
Sbjct: 44 EVRQEGATPTEGGMILYCKAGPDGQAIGDCPFCHFVRLVLEELNLEYEVLPTTSETKPKWLVDHYEGKMPALRHRKECYTESSVIVDYLLFFFGKNKEISQTSSN--------DIVGGLFPAVAKYLKHTPDNDDTDLELRDNLKIILQQLDDHLVGKQ--FWNGDIFTQVDCKLAPQLYHLQCGIDAFQKQIDLAEYDHLTLYMSNLFARPSFQATVYPKETVEWGWSNARN 266
BLAST of EWM29073.1 vs. NCBI_GenBank
Match: gi|1210526493|dbj|GAX14674.1| (chloride intracellular channel protein 2 [Fistulifera solaris]) HSP 1 Score: 163.31 bits (412), Expect = 1.324e-45 Identity = 92/243 (37.86%), Postives = 133/243 (54.73%), Query Frame = 0
Query: 77 SARSTTGF-GDARGRGARDEQGRIELLCKAGPDGAALGDCPFCHYVQMVLRYKGLRYRLIPLTPEDKPEWLVEGYGGKMPCLVHDEEAYTDSGTITQYLEYFFPGEEPLTVEDENPELAEEVKTATSGVFGAFARYMKNM--DKEQDPPLQAALVEELNKVDTLLQKTKGPFLAGERITLDDMALAPKLYHIKVGVAHFKNVIIPPSLTALAAYMQHIFDMDIFQESSYPPDVITWGWGNARK 316
S R+ TG+ G G + L CKAGPDG +GDCPFCH V++VL L Y LIP T E KP+WL++ + GKMP L H YT+S I YL G++ L+ + N + A +G+F A A+Y+K+ + E+D L+ L L ++D L F GE T D +AP+LYH++ GVA F+ I ++ YM+++FD F+ ++Y + + WGW NARK
Sbjct: 4 SGRTITGYSGSDNG---------MTLYCKAGPDGQTIGDCPFCHAVRLVLEELHLDYELIPATAETKPQWLLDHFEGKMPALRHGNMCYTESSVIIDYL----LGQDELSQANCN-------EAANAGLFPAIAKYLKHTPDNDEEDGKLRDDLKTILQRMDAHLDGK--TFWNGESFTQTDCKIAPQLYHLQCGVAAFQKDIDLNEYANVSRYMKNLFDRQSFRSTTYSAETVEWGWSNARK 224
BLAST of EWM29073.1 vs. NCBI_GenBank
Match: gi|291231084|ref|XP_002735493.1| (PREDICTED: chloride intracellular channel protein 5-like [Saccoglossus kowalevskii]) HSP 1 Score: 157.918 bits (398), Expect = 1.508e-43 Identity = 85/219 (38.81%), Postives = 122/219 (55.71%), Query Frame = 0
Query: 99 IELLCKAGPDGAALGDCPFCHYVQMVLRYKGLRYRLIPLTPEDKPEWLVE-GYGGKMPCLVHDEEAYTDSGTITQYLEYFFPGEEPLTVEDENPEL-AEEVKTATSG--VFGAFARYMKNMDKEQDPPLQAALVEELNKVDTLLQKTKGPFLAGERITLDDMALAPKLYHIKVGVAHFKNVIIPPSLTALAAYMQHIFDMDIFQESSYPPDVITWGWGN 313
IEL KAG DG +LGDCPF H +QM+L+ KGL Y+LIP+ + KP ++ GK+P L HD DS I +YLE FP P+L A+ V +G +F FA +KN D + L+ AL+ E+ K++ L + G +L G+ + L D + PKLYH+KV HFK+ IP + L YM F ++F+ ++YP + I GW +
Sbjct: 3 IELFVKAGTDGKSLGDCPFSHRIQMILQLKGLEYKLIPVNMKIKPRGFLDISPAGKVPVLTHDGGRMDDSTAIAEYLETTFP----------EPKLRADNVAADNAGDRLFHKFAAVLKNRDASAEVHLKNALLTEVRKLNNFLSNSPGVYLDGDTLKLPDCNILPKLYHLKVAAKHFKDFEIPDEMDVLKTYMATAFQTEVFKTTAYPEEEIINGWAD 211
BLAST of EWM29073.1 vs. NCBI_GenBank
Match: gi|224004102|ref|XP_002295702.1| (dehydroascorbate reductase and valine--tRNA ligase-like protein-like protein [Thalassiosira pseudonana CCMP1335] >gi|209585734|gb|ACI64419.1| dehydroascorbate reductase and valine--tRNA ligase-like protein-like protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 154.066 bits (388), Expect = 4.544e-41 Identity = 105/298 (35.23%), Postives = 149/298 (50.00%), Query Frame = 0
Query: 41 VAVRYITLADATPQSITSRIEGSHTRSSMSSSIALASARSTTGFGD-----------ARGRG-ARDEQGR------IELLCKAGPDGAALGDCPFCHYVQMVLRYKGLRYRLIPLTPEDKPEWLVEGYGGKMPCLVHDEEAYTDSGTITQYLEYFFPGEEPLTVEDENPELAEEVKTATSGVFGAFARYMKNMDK--EQDPPLQAALVEELNKVDTLLQKT--KGPFLA--GERITLDDMALAPKLYHIKVGVAHFKN--VIIPPSLTALAAYMQHIFDMDIFQES-SYPPDVITWGW 311
+A ++TL T QS++S+ + S+S SI + T ARGRG R E+G + L K DG ++GDCPF H+V+MVL K L Y L+P T E+KP+WL+E Y GKMP L H E Y DS I QYL++FF + E E AE A G F + A+++K+ E+D Q AL E+L ++ L + GP+L GE TL D ++APKLY + V + K + + A+ Y +F FQ + Y P+ + WGW
Sbjct: 5 LARYHLTLLGLTFQSLSSQAFIAPNTRSVSRSIIVGGESITNNINSRMTSSSPPLEMARGRGLERLEEGATPLPGGMTLYVKPAEDGKSVGDCPFAHFVRMVLHEKNLEYDLLPTTQENKPQWLLEDYDGKMPALRHRRECYVDSEVIAQYLDFFFQDPKLSVAGGETGEAAE----AVDGFFPSMAKFVKHSPNGDEEDKEKQEALEEKLQTLNDFLSRDGRTGPYLVGNGETFTLLDCSMAPKLYAMDVCLEKIKENPIDLKGKYPAVRKYCDDVFARPSFQSTVEYGPETVVWGW 298
BLAST of EWM29073.1 vs. NCBI_GenBank
Match: gi|397609755|gb|EJK60500.1| (hypothetical protein THAOC_19132 [Thalassiosira oceanica]) HSP 1 Score: 153.68 bits (387), Expect = 2.053e-40 Identity = 102/255 (40.00%), Postives = 141/255 (55.29%), Query Frame = 0
Query: 65 TRSSMSSSIALASARSTTGFGDARGRGARDEQGRIELLCKAGPDGAALGDCPFCHYVQMVLRYKGLRYRLIPLTPEDKPEWLVEGYGGKMPCLVHDEEAYTDSGTITQYLEYFFPGEEPLTVEDENPELAEEVKTATSGVFGAFARYMKNMDK--EQDPPLQAALVEELNKVDTLLQKT--KGPFLA--GERITLDDMALAPKLYHIKVGVAHFKN--VIIPPSLTALAAYMQHIFDM-DIFQESSYPPDVITWG 310
TR++ SS L R+ G + R GA G + L K DG ++GDCPF H+V++VL KGL Y L+P T E KP+WLV+ YGGKMP L H +E Y DS I QYL++FF E L+V E ++ + A G F A A+++K+ E+D QAAL E+L+ ++ L K GP+L GE TL D ++APKLY + V + K V AL YM +F+ + S Y P+ +TWG
Sbjct: 25 TRAAHVSSSGLDMIRNR-GL-ETREEGATPLPGGMTLYVKPAADGKSVGDCPFAHFVRIVLAEKGLEYDLVPSTQEAKPQWLVDDYGGKMPALRHRKECYVDSEVIAQYLDFFFK-EPELSVS----EGTDDAEAAIDGFFPAMAKFIKHSPNGDEEDKEKQAALEEKLSVLEAHLGKVGRTGPYLVGNGEAFTLLDASMAPKLYALDVCLKEIKGNPVDFDGKYPALRKYMDEVFERPSVKSTSEYGPETVTWG 272 The following BLAST results are available for this feature:
BLAST of EWM29073.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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